RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 MTUS2Q5JR59 1369 aa29.69■■■□□ 2.34
YBX1-204ENST00000467957 SCAPERQ9BY12 1400 aa29.67■■■□□ 2.34
YBX1-204ENST00000467957 EHBP1L1Q8N3D4 1523 aa29.66■■■□□ 2.34
YBX1-204ENST00000467957 CDC42BPAQ5VT25 1732 aa29.65■■■□□ 2.34
YBX1-204ENST00000467957 KDM4FA0A1W2PPD8 638 aa29.65■■■□□ 2.34
YBX1-204ENST00000467957 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
YBX1-204ENST00000467957 ZMYM4Q5VZL5 1548 aa29.64■■■□□ 2.34
YBX1-204ENST00000467957 POGZQ7Z3K3 1410 aa29.63■■■□□ 2.33
YBX1-204ENST00000467957 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
YBX1-204ENST00000467957 GPATCH8Q9UKJ3 1502 aaKnown RBP29.61■■■□□ 2.33
YBX1-204ENST00000467957 MAGI2Q86UL8 1455 aa29.58■■■□□ 2.33
YBX1-204ENST00000467957 MAP3K1Q13233 1512 aa29.57■■■□□ 2.32
YBX1-204ENST00000467957 ARHGEF40Q8TER5 1519 aa29.57■■■□□ 2.32
YBX1-204ENST00000467957 CCNB3Q8WWL7 1395 aa29.55■■■□□ 2.32
YBX1-204ENST00000467957 ABCC1P33527 1531 aa29.55■■■□□ 2.32
YBX1-204ENST00000467957 ZNF518AQ6AHZ1 1483 aa29.55■■■□□ 2.32
YBX1-204ENST00000467957 ZFYVE16Q7Z3T8 1539 aa29.51■■■□□ 2.32
YBX1-204ENST00000467957 KDM5CP41229 1560 aa29.51■■■□□ 2.31
YBX1-204ENST00000467957 LRRC9Q6ZRR7 1453 aa29.49■■■□□ 2.31
YBX1-204ENST00000467957 SUPT6HQ7KZ85 1726 aaKnown RBP29.49■■■□□ 2.31
YBX1-204ENST00000467957 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
YBX1-204ENST00000467957 ARHGEF12Q9NZN5 1544 aa29.49■■■□□ 2.31
YBX1-204ENST00000467957 SAMD9LQ8IVG5 1584 aa29.48■■■□□ 2.31
YBX1-204ENST00000467957 CFDP1Q9UEE9 299 aaPredicted RBP29.48■■■□□ 2.31
YBX1-204ENST00000467957 YEATS2Q9ULM3 1422 aa29.47■■■□□ 2.31
YBX1-204ENST00000467957 AFAP1Q8N556 730 aa29.47■■■□□ 2.31
YBX1-204ENST00000467957 NCOA2Q15596 1464 aa29.46■■■□□ 2.31
YBX1-204ENST00000467957 TRAPPC8Q9Y2L5 1435 aa29.44■■■□□ 2.3
YBX1-204ENST00000467957 PLEKHH2Q8IVE3 1493 aa29.43■■■□□ 2.3
YBX1-204ENST00000467957 ZNF777Q9ULD5 760 aaPredicted RBP29.43■■■□□ 2.3
YBX1-204ENST00000467957 KIAA1107Q9UPP5 1409 aa29.43■■■□□ 2.3
YBX1-204ENST00000467957 HECW2Q9P2P5 1572 aa29.41■■■□□ 2.3
YBX1-204ENST00000467957 MLH3Q9UHC1 1453 aa29.41■■■□□ 2.3
YBX1-204ENST00000467957 SYCP2Q9BX26 1530 aa29.4■■■□□ 2.3
YBX1-204ENST00000467957 KANK4Q5T7N3 995 aaPredicted RBP29.39■■■□□ 2.3
YBX1-204ENST00000467957 ATP10AO60312 1499 aa29.39■■■□□ 2.3
YBX1-204ENST00000467957 BCORL1Q5H9F3 1711 aa29.37■■■□□ 2.29
YBX1-204ENST00000467957 ADAMTSL3P82987 1691 aa29.36■■■□□ 2.29
YBX1-204ENST00000467957 APLP2Q06481 763 aa29.35■■■□□ 2.29
YBX1-204ENST00000467957 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
YBX1-204ENST00000467957 C9orf84Q5VXU9 1444 aa29.35■■■□□ 2.29
YBX1-204ENST00000467957 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.299e-7■■■■□ 23.6
YBX1-204ENST00000467957 SIGLEC1Q9BZZ2 1709 aa29.34■■■□□ 2.29
YBX1-204ENST00000467957 DIP2CQ9Y2E4 1556 aa29.32■■■□□ 2.28
YBX1-204ENST00000467957 ZNF644Q9H582 1327 aaPredicted RBP29.31■■■□□ 2.28
YBX1-204ENST00000467957 KIDINS220Q9ULH0 1771 aa29.3■■■□□ 2.28
YBX1-204ENST00000467957 ABCA6Q8N139 1617 aa29.3■■■□□ 2.28
YBX1-204ENST00000467957 REREQ9P2R6 1566 aa29.3■■■□□ 2.28
YBX1-204ENST00000467957 MYT1LQ9UL68 1186 aa29.29■■■□□ 2.28
YBX1-204ENST00000467957 MBD5Q9P267 1494 aa29.29■■■□□ 2.28
YBX1-204ENST00000467957 SPAG9O60271 1321 aaKnown RBP29.25■■■□□ 2.27
YBX1-204ENST00000467957 CAMSAP2Q08AD1 1489 aa29.24■■■□□ 2.27
YBX1-204ENST00000467957 MADDQ8WXG6 1647 aa29.23■■■□□ 2.27
YBX1-204ENST00000467957 INO80Q9ULG1 1556 aaPredicted RBP29.22■■■□□ 2.27
YBX1-204ENST00000467957 MYOM3Q5VTT5 1437 aa29.22■■■□□ 2.27
YBX1-204ENST00000467957 MIA2Q96PC5 1412 aa29.21■■■□□ 2.27
YBX1-204ENST00000467957 ATP7AQ04656 1500 aa29.21■■■□□ 2.27
YBX1-204ENST00000467957 AGLP35573 1532 aa29.2■■■□□ 2.26
YBX1-204ENST00000467957 PTPRMP28827 1452 aa29.19■■■□□ 2.26
YBX1-204ENST00000467957 RSPH4AQ5TD94 716 aa29.19■■■□□ 2.26
YBX1-204ENST00000467957 CCDC141Q6ZP82 1450 aa29.17■■■□□ 2.26
YBX1-204ENST00000467957 ARHGEF5Q12774 1597 aa29.16■■■□□ 2.26
YBX1-204ENST00000467957 RTEL1-TNFRSF6BF6WH68 1400 aa29.15■■■□□ 2.26
YBX1-204ENST00000467957 RIMS1Q86UR5 1692 aaKnown RBP29.13■■■□□ 2.25
YBX1-204ENST00000467957 MLECQ14165 292 aa29.13■■■□□ 2.25
YBX1-204ENST00000467957 FER1L4A9Z1Z3 1794 aa29.11■■■□□ 2.25
YBX1-204ENST00000467957 PLXNC1O60486 1568 aa29.09■■■□□ 2.25
YBX1-204ENST00000467957 ADGBQ8N7X0 1667 aa29.09■■■□□ 2.25
YBX1-204ENST00000467957 A2MP01023 1474 aa29.08■■■□□ 2.25
YBX1-204ENST00000467957 PTPN23Q9H3S7 1636 aa29.03■■■□□ 2.24
YBX1-204ENST00000467957 TSPY4P0CV99 314 aa29.03■■■□□ 2.24
YBX1-204ENST00000467957 TSPY10P0CW01 314 aa29.03■■■□□ 2.24
YBX1-204ENST00000467957 FGD6Q6ZV73 1430 aa29.03■■■□□ 2.24
YBX1-204ENST00000467957 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.24
YBX1-204ENST00000467957 TCOF1Q13428 1488 aaKnown RBP29■■■□□ 2.23
YBX1-204ENST00000467957 DHX29Q7Z478 1369 aaKnown RBP28.98■■■□□ 2.23
YBX1-204ENST00000467957 CNTLNQ9NXG0 1405 aa28.93■■■□□ 2.22
YBX1-204ENST00000467957 ESF1Q9H501 851 aaKnown RBP28.91■■■□□ 2.22
YBX1-204ENST00000467957 ABCC5O15440 1437 aa28.91■■■□□ 2.22
YBX1-204ENST00000467957 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
YBX1-204ENST00000467957 DNMT1P26358 1616 aaKnown RBP28.9■■■□□ 2.22
YBX1-204ENST00000467957 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.22
YBX1-204ENST00000467957 PPP6R1Q9UPN7 881 aa28.88■■■□□ 2.21
YBX1-204ENST00000467957 DAPK1P53355 1430 aa28.87■■■□□ 2.21
YBX1-204ENST00000467957 PLPPR3Q6T4P5 718 aa28.86■■■□□ 2.21
YBX1-204ENST00000467957 MROH2AA6NES4 1674 aa28.86■■■□□ 2.21
YBX1-204ENST00000467957 C3P01024 1663 aa28.86■■■□□ 2.21
YBX1-204ENST00000467957 CEBPAP49715 358 aaPredicted RBP28.85■■■□□ 2.21
YBX1-204ENST00000467957 GGT6Q6P531 493 aa28.85■■■□□ 2.21
YBX1-204ENST00000467957 LMTK3Q96Q04 1460 aa28.83■■■□□ 2.21
YBX1-204ENST00000467957 KIF3BO15066 747 aa28.82■■■□□ 2.2
YBX1-204ENST00000467957 CLTCQ00610 1675 aaKnown RBP28.8■■■□□ 2.2
YBX1-204ENST00000467957 DUOX2Q9NRD8 1548 aa28.79■■■□□ 2.2
YBX1-204ENST00000467957 EIF2AK4Q9P2K8 1649 aaKnown RBP28.79■■■□□ 2.2
YBX1-204ENST00000467957 ZMYM3Q14202 1370 aa28.78■■■□□ 2.2
YBX1-204ENST00000467957 FAM135AQ9P2D6 1515 aa28.78■■■□□ 2.2
YBX1-204ENST00000467957 PREX1Q8TCU6 1659 aa28.77■■■□□ 2.2
YBX1-204ENST00000467957 SETD1BQ9UPS6 1966 aaKnown RBP28.76■■■□□ 2.19
YBX1-204ENST00000467957 FAM50AQ14320 339 aaKnown RBP28.76■■■□□ 2.19
YBX1-204ENST00000467957 KIF15Q9NS87 1388 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms