RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 ARAP3Q8WWN8 1544 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 ITGAEP38570 1179 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.15
PRPF3-202ENST00000467329 RAB3GAP2Q9H2M9 1393 aa14.08□□□□□ -0.16
PRPF3-202ENST00000467329 ARHGEF5Q12774 1597 aa14.08□□□□□ -0.16
PRPF3-202ENST00000467329 CDC42BPBQ9Y5S2 1711 aa14.08□□□□□ -0.16
PRPF3-202ENST00000467329 ABCC5O15440 1437 aa14.07□□□□□ -0.16
PRPF3-202ENST00000467329 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
PRPF3-202ENST00000467329 ADGBQ8N7X0 1667 aa14.06□□□□□ -0.16
PRPF3-202ENST00000467329 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
PRPF3-202ENST00000467329 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
PRPF3-202ENST00000467329 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
PRPF3-202ENST00000467329 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
PRPF3-202ENST00000467329 NAIPQ13075 1403 aa14.05□□□□□ -0.16
PRPF3-202ENST00000467329 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
PRPF3-202ENST00000467329 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
PRPF3-202ENST00000467329 ABCA9Q8IUA7 1624 aa14.05□□□□□ -0.16
PRPF3-202ENST00000467329 ADGRL2O95490 1459 aa14.04□□□□□ -0.16
PRPF3-202ENST00000467329 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
PRPF3-202ENST00000467329 PLCH2O75038 1416 aa14.04□□□□□ -0.16
PRPF3-202ENST00000467329 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
PRPF3-202ENST00000467329 ARHGAP5Q13017 1502 aa14.02□□□□□ -0.16
PRPF3-202ENST00000467329 ZNF644Q9H582 1327 aaPredicted RBP14.02□□□□□ -0.17
PRPF3-202ENST00000467329 KIAA1107Q9UPP5 1409 aa14.02□□□□□ -0.17
PRPF3-202ENST00000467329 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
PRPF3-202ENST00000467329 MBD5Q9P267 1494 aa14□□□□□ -0.17
PRPF3-202ENST00000467329 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
PRPF3-202ENST00000467329 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
PRPF3-202ENST00000467329 MAPKBP1O60336 1514 aa14□□□□□ -0.17
PRPF3-202ENST00000467329 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
PRPF3-202ENST00000467329 ABCC1P33527 1531 aa13.97□□□□□ -0.17
PRPF3-202ENST00000467329 NCOA1Q15788 1441 aa13.96□□□□□ -0.17
PRPF3-202ENST00000467329 EFCAB2Q5VUJ9 269 aa13.96□□□□□ -0.17
PRPF3-202ENST00000467329 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
PRPF3-202ENST00000467329 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.17
PRPF3-202ENST00000467329 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.18
PRPF3-202ENST00000467329 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.18
PRPF3-202ENST00000467329 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
PRPF3-202ENST00000467329 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
PRPF3-202ENST00000467329 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
PRPF3-202ENST00000467329 CHIC2Q9UKJ5 165 aa13.92□□□□□ -0.18
PRPF3-202ENST00000467329 GLI2P10070 1586 aa13.92□□□□□ -0.18
PRPF3-202ENST00000467329 RRP7BPQ9NSQ0 103 aa13.92□□□□□ -0.18
PRPF3-202ENST00000467329 KDM6BO15054 1643 aa13.91□□□□□ -0.18
PRPF3-202ENST00000467329 FANCAO15360 1455 aa13.9□□□□□ -0.18
PRPF3-202ENST00000467329 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
PRPF3-202ENST00000467329 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
PRPF3-202ENST00000467329 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
PRPF3-202ENST00000467329 HNRNPMP52272 730 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRPF3-202ENST00000467329 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
PRPF3-202ENST00000467329 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
PRPF3-202ENST00000467329 MAP3K4Q9Y6R4 1608 aa13.87□□□□□ -0.19
PRPF3-202ENST00000467329 CD109Q6YHK3 1445 aa13.86□□□□□ -0.19
PRPF3-202ENST00000467329 ANKRD50Q9ULJ7 1429 aa13.86□□□□□ -0.19
PRPF3-202ENST00000467329 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
PRPF3-202ENST00000467329 KIF15Q9NS87 1388 aa13.85□□□□□ -0.19
PRPF3-202ENST00000467329 NEO1Q92859 1461 aa13.85□□□□□ -0.19
PRPF3-202ENST00000467329 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
PRPF3-202ENST00000467329 DUOX2Q9NRD8 1548 aa13.84□□□□□ -0.19
PRPF3-202ENST00000467329 INO80Q9ULG1 1556 aaPredicted RBP13.84□□□□□ -0.19
PRPF3-202ENST00000467329 TRAPPC8Q9Y2L5 1435 aa13.84□□□□□ -0.19
PRPF3-202ENST00000467329 ZFYVE16Q7Z3T8 1539 aa13.83□□□□□ -0.2
PRPF3-202ENST00000467329 DIP2BQ9P265 1576 aa13.82□□□□□ -0.2
PRPF3-202ENST00000467329 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
PRPF3-202ENST00000467329 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
PRPF3-202ENST00000467329 UNC13BO14795 1591 aa13.81□□□□□ -0.2
PRPF3-202ENST00000467329 DENND4BO75064 1496 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-202ENST00000467329 SCAPERQ9BY12 1400 aa13.8□□□□□ -0.2
PRPF3-202ENST00000467329 PZPP20742 1482 aa13.8□□□□□ -0.2
PRPF3-202ENST00000467329 ZNF518AQ6AHZ1 1483 aa13.79□□□□□ -0.2
PRPF3-202ENST00000467329 ATP7AQ04656 1500 aa13.79□□□□□ -0.2
PRPF3-202ENST00000467329 KDM5CP41229 1560 aa13.79□□□□□ -0.2
PRPF3-202ENST00000467329 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
PRPF3-202ENST00000467329 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
PRPF3-202ENST00000467329 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
PRPF3-202ENST00000467329 POGZQ7Z3K3 1410 aa13.78□□□□□ -0.2
PRPF3-202ENST00000467329 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.2
PRPF3-202ENST00000467329 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
PRPF3-202ENST00000467329 MLH3Q9UHC1 1453 aa13.75□□□□□ -0.21
PRPF3-202ENST00000467329 IQGAP3Q86VI3 1631 aa13.74□□□□□ -0.21
PRPF3-202ENST00000467329 TEX14Q8IWB6 1497 aa13.73□□□□□ -0.21
PRPF3-202ENST00000467329 HECW2Q9P2P5 1572 aa13.73□□□□□ -0.21
PRPF3-202ENST00000467329 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
PRPF3-202ENST00000467329 DEPDC5O75140 1603 aa13.73□□□□□ -0.21
PRPF3-202ENST00000467329 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
PRPF3-202ENST00000467329 PPRC1Q5VV67 1664 aaKnown RBP13.72□□□□□ -0.21
PRPF3-202ENST00000467329 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
PRPF3-202ENST00000467329 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
PRPF3-202ENST00000467329 NUP155O75694 1391 aa13.71□□□□□ -0.21
PRPF3-202ENST00000467329 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
PRPF3-202ENST00000467329 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
PRPF3-202ENST00000467329 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
PRPF3-202ENST00000467329 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
PRPF3-202ENST00000467329 ZMYM4Q5VZL5 1548 aa13.69□□□□□ -0.22
PRPF3-202ENST00000467329 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
PRPF3-202ENST00000467329 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
PRPF3-202ENST00000467329 SIN3AQ96ST3 1273 aa13.69□□□□□ -0.22
PRPF3-202ENST00000467329 RPRD2Q5VT52 1461 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms