RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	OTUD5	Q96G74	571 aa		13.81	□□□□□ -0.2
RBM17-208	ENST00000467080	TMEM92	Q6UXU6	159 aa		13.8	□□□□□ -0.2
RBM17-208	ENST00000467080	NCKAP5L	Q9HCH0	1330 aa		13.76	□□□□□ -0.21
RBM17-208	ENST00000467080	SLAIN1	Q8ND83	568 aa		13.76	□□□□□ -0.21
RBM17-208	ENST00000467080	TMC2	Q8TDI7	906 aa		13.76	□□□□□ -0.21
RBM17-208	ENST00000467080	CRISPLD2	Q9H0B8	497 aa		13.75	□□□□□ -0.21
RBM17-208	ENST00000467080	C2orf72	A6NCS6	295 aa		13.74	□□□□□ -0.21
RBM17-208	ENST00000467080	PDE4A	P27815	886 aa		13.74	□□□□□ -0.21
RBM17-208	ENST00000467080	KIF3C	O14782	793 aa		13.73	□□□□□ -0.21
RBM17-208	ENST00000467080	GPHN	Q9NQX3	736 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM17-208	ENST00000467080	LARP6	Q9BRS8	491 aa	Known RBP	13.71	□□□□□ -0.21
RBM17-208	ENST00000467080	SLC24A1	O60721	1099 aa		13.66	□□□□□ -0.22
RBM17-208	ENST00000467080	DSG2	Q14126	1118 aa		13.66	□□□□□ -0.22
RBM17-208	ENST00000467080	MFSD10	Q14728	455 aa		13.65	□□□□□ -0.22
RBM17-208	ENST00000467080	VSIG10	Q8N0Z9	540 aa		13.65	□□□□□ -0.22
RBM17-208	ENST00000467080	DDX27	Q96GQ7	796 aa	Known RBP	13.65	□□□□□ -0.22
RBM17-208	ENST00000467080	KDM2A	Q9Y2K7	1162 aa		13.65	□□□□□ -0.22
RBM17-208	ENST00000467080	FOXK1	P85037	733 aa		13.64	□□□□□ -0.23
RBM17-208	ENST00000467080	PPP1R15B	Q5SWA1	713 aa		13.63	□□□□□ -0.23
RBM17-208	ENST00000467080	WDR70	Q9NW82	654 aa		13.62	□□□□□ -0.23
RBM17-208	ENST00000467080	PLPP6	Q8IY26	295 aa		13.61	□□□□□ -0.23
RBM17-208	ENST00000467080	HOXB3	P14651	431 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM17-208	ENST00000467080	SNPH	O15079	494 aa		13.51	□□□□□ -0.25
RBM17-208	ENST00000467080	E2F4	Q16254	413 aa		13.5	□□□□□ -0.25
RBM17-208	ENST00000467080	CAMK2B	Q13554	666 aa		13.49	□□□□□ -0.25
RBM17-208	ENST00000467080	DOK7	Q18PE1	504 aa		13.49	□□□□□ -0.25
RBM17-208	ENST00000467080	SLC34A2	O95436	690 aa		13.46	□□□□□ -0.25
RBM17-208	ENST00000467080	EMILIN3	Q9NT22	766 aa		13.46	□□□□□ -0.25
RBM17-208	ENST00000467080	ZNF710	Q8N1W2	664 aa		13.44	□□□□□ -0.26
RBM17-208	ENST00000467080	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
RBM17-208	ENST00000467080	OXER1	Q8TDS5	423 aa		13.43	□□□□□ -0.26
RBM17-208	ENST00000467080	RIMBP2	O15034	1052 aa		13.42	□□□□□ -0.26
RBM17-208	ENST00000467080	KCNV2	Q8TDN2	545 aa		13.42	□□□□□ -0.26
RBM17-208	ENST00000467080	PTCD2	Q8WV60	388 aa	Known RBP	13.42	□□□□□ -0.26
RBM17-208	ENST00000467080	FAM163A	Q96GL9	167 aa	Predicted RBP	13.41	□□□□□ -0.26
RBM17-208	ENST00000467080	PCDHGA4	Q9Y5G9	962 aa		13.4	□□□□□ -0.26
RBM17-208	ENST00000467080	ARSI	Q5FYB1	569 aa		13.38	□□□□□ -0.27
RBM17-208	ENST00000467080	P3H3	Q8IVL6	736 aa		13.38	□□□□□ -0.27
RBM17-208	ENST00000467080	ZSWIM6	Q9HCJ5	1215 aa		13.38	□□□□□ -0.27
RBM17-208	ENST00000467080	DPYSL4	O14531	572 aa		13.37	□□□□□ -0.27
RBM17-208	ENST00000467080	ST18	O60284	1047 aa		13.37	□□□□□ -0.27
RBM17-208	ENST00000467080	TBC1D12	O60347	775 aa		13.37	□□□□□ -0.27
RBM17-208	ENST00000467080	MAP3K9	P80192	1104 aa		13.37	□□□□□ -0.27
RBM17-208	ENST00000467080	GPR153	Q6NV75	609 aa		13.37	□□□□□ -0.27
RBM17-208	ENST00000467080	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	4e-6	■■■□□ 15.6
RBM17-208	ENST00000467080	ARHGEF1	Q92888	912 aa	Known RBP	13.34	□□□□□ -0.27
RBM17-208	ENST00000467080	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.34	□□□□□ -0.27
RBM17-208	ENST00000467080	HOXB1	P14653	301 aa	Predicted RBP	13.32	□□□□□ -0.28
RBM17-208	ENST00000467080	NUDT7	P0C024	238 aa		13.3	□□□□□ -0.28
RBM17-208	ENST00000467080	LCE2D	Q5TA82	110 aa	Predicted RBP	13.3	□□□□□ -0.28
RBM17-208	ENST00000467080	EVI5	O60447	810 aa		13.29	□□□□□ -0.28
RBM17-208	ENST00000467080	KDM4F	A0A1W2PPD8	638 aa		13.27	□□□□□ -0.29
RBM17-208	ENST00000467080	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.25	□□□□□ -0.29
RBM17-208	ENST00000467080	PDIA6	Q15084	440 aa		13.25	□□□□□ -0.29
RBM17-208	ENST00000467080	MARVELD3	Q96A59	401 aa		13.25	□□□□□ -0.29
RBM17-208	ENST00000467080	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM17-208	ENST00000467080	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM17-208	ENST00000467080	EMP3	P54852	163 aa		13.21	□□□□□ -0.29
RBM17-208	ENST00000467080	LHX6	Q9UPM6	363 aa		13.21	□□□□□ -0.29
RBM17-208	ENST00000467080	SEMA3E	O15041	775 aa		13.17	□□□□□ -0.3
RBM17-208	ENST00000467080	ERBB3	P21860	1342 aa		13.16	□□□□□ -0.3
RBM17-208	ENST00000467080	FAM205C	A6NFA0	338 aa		13.14	□□□□□ -0.31
RBM17-208	ENST00000467080	PTGER2	P43116	358 aa		13.14	□□□□□ -0.31
RBM17-208	ENST00000467080	NBR1	Q14596	966 aa		13.14	□□□□□ -0.31
RBM17-208	ENST00000467080	DDX12P	Q92771	950 aa		13.14	□□□□□ -0.31
RBM17-208	ENST00000467080	MLLT3	P42568	568 aa	Predicted RBP	13.12	□□□□□ -0.31
RBM17-208	ENST00000467080	VARS2	Q5ST30	1063 aa	Known RBP	13.12	□□□□□ -0.31
RBM17-208	ENST00000467080	GRXCR2	A6NFK2	248 aa		13.11	□□□□□ -0.31
RBM17-208	ENST00000467080	ZNF454	Q8N9F8	522 aa		13.11	□□□□□ -0.31
RBM17-208	ENST00000467080	FOSB	P53539	338 aa		13.1	□□□□□ -0.31
RBM17-208	ENST00000467080	JPH4	Q96JJ6	628 aa		13.1	□□□□□ -0.31
RBM17-208	ENST00000467080	POTEB3	A0JP26	581 aa		13.09	□□□□□ -0.31
RBM17-208	ENST00000467080	TESPA1	A2RU30	521 aa	Predicted RBP	13.09	□□□□□ -0.31
RBM17-208	ENST00000467080	PSD	A5PKW4	1024 aa	Predicted RBP	13.09	□□□□□ -0.31
RBM17-208	ENST00000467080	POTEB	Q6S5H4	581 aa		13.09	□□□□□ -0.31
RBM17-208	ENST00000467080	HS3ST6	Q96QI5	342 aa		13.09	□□□□□ -0.31
RBM17-208	ENST00000467080	PCDHGA10	Q9Y5H3	936 aa		13.09	□□□□□ -0.31
RBM17-208	ENST00000467080	PHF14	O94880	888 aa		13.08	□□□□□ -0.32
RBM17-208	ENST00000467080	POTEG	Q6S5H5	508 aa		13.07	□□□□□ -0.32
RBM17-208	ENST00000467080	PPP4R3B	Q5MIZ7	849 aa		13.06	□□□□□ -0.32
RBM17-208	ENST00000467080	POTEM	A6NI47	508 aa		13.05	□□□□□ -0.32
RBM17-208	ENST00000467080	TYW1B	Q6NUM6	668 aa		13.04	□□□□□ -0.32
RBM17-208	ENST00000467080	ZDHHC16	Q969W1	377 aa		13.04	□□□□□ -0.32
RBM17-208	ENST00000467080	BCAN	Q96GW7	911 aa		13.04	□□□□□ -0.32
RBM17-208	ENST00000467080	EPAS1	Q99814	870 aa		13.04	□□□□□ -0.32
RBM17-208	ENST00000467080	OSBP	P22059	807 aa		13.03	□□□□□ -0.32
RBM17-208	ENST00000467080	PRIM1	P49642	420 aa	Known RBP	13.01	□□□□□ -0.33
RBM17-208	ENST00000467080	SMYD5	Q6GMV2	418 aa		13.01	□□□□□ -0.33
RBM17-208	ENST00000467080	ADAM33	Q9BZ11	813 aa		13.01	□□□□□ -0.33
RBM17-208	ENST00000467080	ZNF687	Q8N1G0	1237 aa		13	□□□□□ -0.33
RBM17-208	ENST00000467080	FBXW7	Q969H0	707 aa		13	□□□□□ -0.33
RBM17-208	ENST00000467080	RBM33	Q96EV2	1170 aa	Known RBP	13	□□□□□ -0.33
RBM17-208	ENST00000467080	EN1	Q05925	392 aa	Predicted RBP	12.97	□□□□□ -0.33
RBM17-208	ENST00000467080	BCL2L12	Q9HB09	334 aa		12.96	□□□□□ -0.33
RBM17-208	ENST00000467080	MAP3K7	O43318	606 aa		12.95	□□□□□ -0.34
RBM17-208	ENST00000467080	TULP1	O00294	542 aa	Predicted RBP	12.94	□□□□□ -0.34
RBM17-208	ENST00000467080	RBM26	Q5T8P6	1007 aa	Known RBP	12.94	□□□□□ -0.34
RBM17-208	ENST00000467080	POTEE	Q6S8J3	1075 aa		12.94	□□□□□ -0.34
RBM17-208	ENST00000467080	C6orf132	Q5T0Z8	1188 aa		12.93	□□□□□ -0.34
RBM17-208	ENST00000467080	AXIN2	Q9Y2T1	843 aa		12.93	□□□□□ -0.34

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