RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
GTF3A-205ENST00000466776 MAGI2Q86UL8 1455 aa19.7■□□□□ 0.74
GTF3A-205ENST00000466776 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
GTF3A-205ENST00000466776 KIF14Q15058 1648 aa19.69■□□□□ 0.74
GTF3A-205ENST00000466776 PLCH2O75038 1416 aa19.68■□□□□ 0.74
GTF3A-205ENST00000466776 CLIP1P30622 1438 aa19.65■□□□□ 0.74
GTF3A-205ENST00000466776 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
GTF3A-205ENST00000466776 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
GTF3A-205ENST00000466776 FER1L4A9Z1Z3 1794 aa19.64■□□□□ 0.73
GTF3A-205ENST00000466776 LRRIQ1Q96JM4 1722 aa19.62■□□□□ 0.73
GTF3A-205ENST00000466776 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
GTF3A-205ENST00000466776 TROQ12816 1431 aaPredicted RBP19.61■□□□□ 0.73
GTF3A-205ENST00000466776 YEATS2Q9ULM3 1422 aa19.6■□□□□ 0.73
GTF3A-205ENST00000466776 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
GTF3A-205ENST00000466776 SIGLEC1Q9BZZ2 1709 aa19.59■□□□□ 0.73
GTF3A-205ENST00000466776 CCDC18Q5T9S5 1454 aa19.57■□□□□ 0.72
GTF3A-205ENST00000466776 ZNF518AQ6AHZ1 1483 aa19.57■□□□□ 0.72
GTF3A-205ENST00000466776 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
GTF3A-205ENST00000466776 MSH5O43196 834 aa19.57■□□□□ 0.72
GTF3A-205ENST00000466776 C9orf84Q5VXU9 1444 aa19.56■□□□□ 0.72
GTF3A-205ENST00000466776 ATP10AO60312 1499 aa19.55■□□□□ 0.72
GTF3A-205ENST00000466776 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
GTF3A-205ENST00000466776 PREX2Q70Z35 1606 aa19.53■□□□□ 0.72
GTF3A-205ENST00000466776 KDM5CP41229 1560 aa19.53■□□□□ 0.72
GTF3A-205ENST00000466776 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
GTF3A-205ENST00000466776 MLECQ14165 292 aa19.52■□□□□ 0.72
GTF3A-205ENST00000466776 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
GTF3A-205ENST00000466776 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
GTF3A-205ENST00000466776 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
GTF3A-205ENST00000466776 PREX1Q8TCU6 1659 aa19.48■□□□□ 0.71
GTF3A-205ENST00000466776 ITSN2Q9NZM3 1697 aa19.48■□□□□ 0.71
GTF3A-205ENST00000466776 CDC42BPAQ5VT25 1732 aa19.48■□□□□ 0.71
GTF3A-205ENST00000466776 FYCO1Q9BQS8 1478 aa19.48■□□□□ 0.71
GTF3A-205ENST00000466776 FBXO41Q8TF61 875 aa19.47■□□□□ 0.71
GTF3A-205ENST00000466776 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
GTF3A-205ENST00000466776 ABCC1P33527 1531 aa19.46■□□□□ 0.71
GTF3A-205ENST00000466776 DIP2CQ9Y2E4 1556 aa19.45■□□□□ 0.7
GTF3A-205ENST00000466776 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
GTF3A-205ENST00000466776 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
GTF3A-205ENST00000466776 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
GTF3A-205ENST00000466776 ABCA6Q8N139 1617 aa19.43■□□□□ 0.7
GTF3A-205ENST00000466776 HSPA2P54652 639 aa19.41■□□□□ 0.7
GTF3A-205ENST00000466776 KIDINS220Q9ULH0 1771 aa19.38■□□□□ 0.69
GTF3A-205ENST00000466776 AGLP35573 1532 aa19.37■□□□□ 0.69
GTF3A-205ENST00000466776 ESF1Q9H501 851 aaKnown RBP19.37■□□□□ 0.69
GTF3A-205ENST00000466776 TRAPPC8Q9Y2L5 1435 aa19.36■□□□□ 0.69
GTF3A-205ENST00000466776 C3P01024 1663 aa19.36■□□□□ 0.69
GTF3A-205ENST00000466776 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
GTF3A-205ENST00000466776 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.69
GTF3A-205ENST00000466776 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
GTF3A-205ENST00000466776 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
GTF3A-205ENST00000466776 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
GTF3A-205ENST00000466776 ZNF777Q9ULD5 760 aaPredicted RBP19.31■□□□□ 0.68
GTF3A-205ENST00000466776 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
GTF3A-205ENST00000466776 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
GTF3A-205ENST00000466776 MROH2AA6NES4 1674 aa19.29■□□□□ 0.68
GTF3A-205ENST00000466776 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
GTF3A-205ENST00000466776 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
GTF3A-205ENST00000466776 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
GTF3A-205ENST00000466776 STRCQ7RTU9 1775 aa19.27■□□□□ 0.68
GTF3A-205ENST00000466776 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
GTF3A-205ENST00000466776 CFDP1Q9UEE9 299 aaPredicted RBP19.26■□□□□ 0.67
GTF3A-205ENST00000466776 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
GTF3A-205ENST00000466776 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
GTF3A-205ENST00000466776 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
GTF3A-205ENST00000466776 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
GTF3A-205ENST00000466776 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
GTF3A-205ENST00000466776 CERKQ8TCT0 537 aa19.24■□□□□ 0.67
GTF3A-205ENST00000466776 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
GTF3A-205ENST00000466776 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.67
GTF3A-205ENST00000466776 PLXNC1O60486 1568 aa19.19■□□□□ 0.66
GTF3A-205ENST00000466776 TIAM1Q13009 1591 aa19.19■□□□□ 0.66
GTF3A-205ENST00000466776 CLTCQ00610 1675 aaKnown RBP19.19■□□□□ 0.66
GTF3A-205ENST00000466776 NPATQ14207 1427 aa19.18■□□□□ 0.66
GTF3A-205ENST00000466776 A2MP01023 1474 aa19.18■□□□□ 0.66
GTF3A-205ENST00000466776 PTPRTO14522 1441 aa19.17■□□□□ 0.66
GTF3A-205ENST00000466776 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
GTF3A-205ENST00000466776 ZMYM3Q14202 1370 aa19.14■□□□□ 0.65
GTF3A-205ENST00000466776 ZNF142P52746 1687 aaPredicted RBP19.13■□□□□ 0.65
GTF3A-205ENST00000466776 MYO3AQ8NEV4 1616 aa19.11■□□□□ 0.65
GTF3A-205ENST00000466776 NCOA1Q15788 1441 aa19.11■□□□□ 0.65
GTF3A-205ENST00000466776 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
GTF3A-205ENST00000466776 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
GTF3A-205ENST00000466776 RTEL1-TNFRSF6BF6WH68 1400 aa19.09■□□□□ 0.65
GTF3A-205ENST00000466776 GGT6Q6P531 493 aa19.09■□□□□ 0.65
GTF3A-205ENST00000466776 MBD5Q9P267 1494 aa19.08■□□□□ 0.64
GTF3A-205ENST00000466776 CCDC141Q6ZP82 1450 aa19.07■□□□□ 0.64
GTF3A-205ENST00000466776 CEP170BQ9Y4F5 1589 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-205ENST00000466776 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-205ENST00000466776 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
GTF3A-205ENST00000466776 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
GTF3A-205ENST00000466776 RSPH4AQ5TD94 716 aa19.05■□□□□ 0.64
GTF3A-205ENST00000466776 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
GTF3A-205ENST00000466776 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
GTF3A-205ENST00000466776 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
GTF3A-205ENST00000466776 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
GTF3A-205ENST00000466776 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
GTF3A-205ENST00000466776 DHX29Q7Z478 1369 aaKnown RBP19.02■□□□□ 0.64
GTF3A-205ENST00000466776 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
GTF3A-205ENST00000466776 ARHGEF5Q12774 1597 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms