RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
LCLAT1-206ENST00000466477 ZFYVE16Q7Z3T8 1539 aa24.26■■□□□ 1.47
LCLAT1-206ENST00000466477 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
LCLAT1-206ENST00000466477 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
LCLAT1-206ENST00000466477 ZMYM4Q5VZL5 1548 aa24.25■■□□□ 1.47
LCLAT1-206ENST00000466477 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
LCLAT1-206ENST00000466477 HECW2Q9P2P5 1572 aa24.23■■□□□ 1.47
LCLAT1-206ENST00000466477 MADDQ8WXG6 1647 aa24.22■■□□□ 1.47
LCLAT1-206ENST00000466477 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
LCLAT1-206ENST00000466477 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
LCLAT1-206ENST00000466477 MLECQ14165 292 aa24.2■■□□□ 1.46
LCLAT1-206ENST00000466477 BCORL1Q5H9F3 1711 aa24.2■■□□□ 1.46
LCLAT1-206ENST00000466477 ADAMTSL3P82987 1691 aa24.2■■□□□ 1.46
LCLAT1-206ENST00000466477 PREX2Q70Z35 1606 aa24.19■■□□□ 1.46
LCLAT1-206ENST00000466477 MYT1LQ9UL68 1186 aa24.18■■□□□ 1.46
LCLAT1-206ENST00000466477 PTPRMP28827 1452 aa24.18■■□□□ 1.46
LCLAT1-206ENST00000466477 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
LCLAT1-206ENST00000466477 CDC42BPBQ9Y5S2 1711 aa24.17■■□□□ 1.46
LCLAT1-206ENST00000466477 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
LCLAT1-206ENST00000466477 RIMS1Q86UR5 1692 aaKnown RBP24.13■■□□□ 1.45
LCLAT1-206ENST00000466477 ARHGEF12Q9NZN5 1544 aa24.13■■□□□ 1.45
LCLAT1-206ENST00000466477 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
LCLAT1-206ENST00000466477 ABCC1P33527 1531 aa24.12■■□□□ 1.45
LCLAT1-206ENST00000466477 MAGI2Q86UL8 1455 aa24.12■■□□□ 1.45
LCLAT1-206ENST00000466477 TRAPPC8Q9Y2L5 1435 aa24.11■■□□□ 1.45
LCLAT1-206ENST00000466477 CDC42BPAQ5VT25 1732 aa24.11■■□□□ 1.45
LCLAT1-206ENST00000466477 MTUS2Q5JR59 1369 aa24.11■■□□□ 1.45
LCLAT1-206ENST00000466477 KDM5CP41229 1560 aa24.08■■□□□ 1.45
LCLAT1-206ENST00000466477 C9orf84Q5VXU9 1444 aa24.08■■□□□ 1.44
LCLAT1-206ENST00000466477 ITSN2Q9NZM3 1697 aa24.07■■□□□ 1.44
LCLAT1-206ENST00000466477 GPATCH8Q9UKJ3 1502 aaKnown RBP24.06■■□□□ 1.44
LCLAT1-206ENST00000466477 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
LCLAT1-206ENST00000466477 ATP10AO60312 1499 aa24.06■■□□□ 1.44
LCLAT1-206ENST00000466477 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
LCLAT1-206ENST00000466477 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
LCLAT1-206ENST00000466477 ABCA6Q8N139 1617 aa24.04■■□□□ 1.44
LCLAT1-206ENST00000466477 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
LCLAT1-206ENST00000466477 EHBP1L1Q8N3D4 1523 aa24.01■■□□□ 1.43
LCLAT1-206ENST00000466477 HNRNPMP52272 730 aaKnown RBP eCLIP24■■□□□ 1.43
LCLAT1-206ENST00000466477 CFDP1Q9UEE9 299 aaPredicted RBP23.99■■□□□ 1.43
LCLAT1-206ENST00000466477 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
LCLAT1-206ENST00000466477 FER1L4A9Z1Z3 1794 aa23.98■■□□□ 1.43
LCLAT1-206ENST00000466477 MLH3Q9UHC1 1453 aa23.96■■□□□ 1.43
LCLAT1-206ENST00000466477 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
LCLAT1-206ENST00000466477 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
LCLAT1-206ENST00000466477 CEBPAP49715 358 aaPredicted RBP23.93■■□□□ 1.42
LCLAT1-206ENST00000466477 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
LCLAT1-206ENST00000466477 LMTK3Q96Q04 1460 aa23.92■■□□□ 1.42
LCLAT1-206ENST00000466477 HSPA2P54652 639 aa23.91■■□□□ 1.42
LCLAT1-206ENST00000466477 SPAG9O60271 1321 aaKnown RBP23.9■■□□□ 1.42
LCLAT1-206ENST00000466477 NCOA2Q15596 1464 aa23.89■■□□□ 1.42
LCLAT1-206ENST00000466477 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
LCLAT1-206ENST00000466477 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
LCLAT1-206ENST00000466477 PLEKHH2Q8IVE3 1493 aa23.85■■□□□ 1.41
LCLAT1-206ENST00000466477 SUPT6HQ7KZ85 1726 aaKnown RBP23.84■■□□□ 1.41
LCLAT1-206ENST00000466477 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
LCLAT1-206ENST00000466477 INO80Q9ULG1 1556 aaPredicted RBP23.83■■□□□ 1.41
LCLAT1-206ENST00000466477 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
LCLAT1-206ENST00000466477 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
LCLAT1-206ENST00000466477 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
LCLAT1-206ENST00000466477 AGLP35573 1532 aa23.79■■□□□ 1.4
LCLAT1-206ENST00000466477 ESF1Q9H501 851 aaKnown RBP23.78■■□□□ 1.4
LCLAT1-206ENST00000466477 MBD5Q9P267 1494 aa23.78■■□□□ 1.4
LCLAT1-206ENST00000466477 A2MP01023 1474 aa23.76■■□□□ 1.39
LCLAT1-206ENST00000466477 ILDR1Q86SU0 546 aaPredicted RBP23.76■■□□□ 1.39
LCLAT1-206ENST00000466477 PLXNC1O60486 1568 aa23.73■■□□□ 1.39
LCLAT1-206ENST00000466477 C3P01024 1663 aa23.73■■□□□ 1.39
LCLAT1-206ENST00000466477 CCDC141Q6ZP82 1450 aa23.72■■□□□ 1.39
LCLAT1-206ENST00000466477 GGT6Q6P531 493 aa23.71■■□□□ 1.39
LCLAT1-206ENST00000466477 PREX1Q8TCU6 1659 aa23.7■■□□□ 1.38
LCLAT1-206ENST00000466477 UHRF1BP1Q6BDS2 1440 aa23.67■■□□□ 1.38
LCLAT1-206ENST00000466477 CLTCQ00610 1675 aaKnown RBP23.66■■□□□ 1.38
LCLAT1-206ENST00000466477 ADGBQ8N7X0 1667 aa23.65■■□□□ 1.38
LCLAT1-206ENST00000466477 CNTLNQ9NXG0 1405 aa23.64■■□□□ 1.37
LCLAT1-206ENST00000466477 APLP2Q06481 763 aa23.63■■□□□ 1.37
LCLAT1-206ENST00000466477 MAP3K1Q13233 1512 aa23.63■■□□□ 1.37
LCLAT1-206ENST00000466477 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
LCLAT1-206ENST00000466477 RTEL1-TNFRSF6BF6WH68 1400 aa23.61■■□□□ 1.37
LCLAT1-206ENST00000466477 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
LCLAT1-206ENST00000466477 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
LCLAT1-206ENST00000466477 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
LCLAT1-206ENST00000466477 KIF3BO15066 747 aa23.58■■□□□ 1.37
LCLAT1-206ENST00000466477 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
LCLAT1-206ENST00000466477 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
LCLAT1-206ENST00000466477 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
LCLAT1-206ENST00000466477 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
LCLAT1-206ENST00000466477 RSPH4AQ5TD94 716 aa23.5■■□□□ 1.35
LCLAT1-206ENST00000466477 MYO3AQ8NEV4 1616 aa23.5■■□□□ 1.35
LCLAT1-206ENST00000466477 STRCQ7RTU9 1775 aa23.5■■□□□ 1.35
LCLAT1-206ENST00000466477 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
LCLAT1-206ENST00000466477 PTPN23Q9H3S7 1636 aa23.49■■□□□ 1.35
LCLAT1-206ENST00000466477 NPATQ14207 1427 aa23.49■■□□□ 1.35
LCLAT1-206ENST00000466477 MAST1Q9Y2H9 1570 aa23.47■■□□□ 1.35
LCLAT1-206ENST00000466477 KDM5DQ9BY66 1539 aa23.46■■□□□ 1.35
LCLAT1-206ENST00000466477 CAMSAP1Q5T5Y3 1602 aa23.45■■□□□ 1.34
LCLAT1-206ENST00000466477 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
LCLAT1-206ENST00000466477 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
LCLAT1-206ENST00000466477 WASHC2CQ9Y4E1 1318 aa23.44■■□□□ 1.34
LCLAT1-206ENST00000466477 ABCC5O15440 1437 aa23.43■■□□□ 1.34
LCLAT1-206ENST00000466477 CEP170BQ9Y4F5 1589 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms