RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
HDAC6-215ENST00000465457 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
HDAC6-215ENST00000465457 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
HDAC6-215ENST00000465457 CDK13Q14004 1512 aaKnown RBP22.64■■□□□ 1.21
HDAC6-215ENST00000465457 MAGI2Q86UL8 1455 aa22.63■■□□□ 1.21
HDAC6-215ENST00000465457 SOCS7O14512 581 aa22.63■■□□□ 1.21
HDAC6-215ENST00000465457 PLEKHD1A6NEE1 506 aa22.6■■□□□ 1.21
HDAC6-215ENST00000465457 CEBPAP49715 358 aaPredicted RBP22.6■■□□□ 1.21
HDAC6-215ENST00000465457 SCAPERQ9BY12 1400 aa22.58■■□□□ 1.21
HDAC6-215ENST00000465457 C9orf84Q5VXU9 1444 aa22.57■■□□□ 1.2
HDAC6-215ENST00000465457 MYO5CQ9NQX4 1742 aa22.56■■□□□ 1.2
HDAC6-215ENST00000465457 ATP10AO60312 1499 aa22.55■■□□□ 1.2
HDAC6-215ENST00000465457 C3P01024 1663 aa22.52■■□□□ 1.2
HDAC6-215ENST00000465457 PLCH2O75038 1416 aa22.52■■□□□ 1.2
HDAC6-215ENST00000465457 KIF14Q15058 1648 aa22.52■■□□□ 1.2
HDAC6-215ENST00000465457 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
HDAC6-215ENST00000465457 DIP2CQ9Y2E4 1556 aa22.49■■□□□ 1.19
HDAC6-215ENST00000465457 LTBP4Q8N2S1 1624 aa22.49■■□□□ 1.19
HDAC6-215ENST00000465457 SETD1BQ9UPS6 1966 aaKnown RBP22.49■■□□□ 1.19
HDAC6-215ENST00000465457 UHRF1BP1Q6BDS2 1440 aa22.48■■□□□ 1.19
HDAC6-215ENST00000465457 KDM5CP41229 1560 aa22.47■■□□□ 1.19
HDAC6-215ENST00000465457 ABCA6Q8N139 1617 aa22.47■■□□□ 1.19
HDAC6-215ENST00000465457 ZNF518AQ6AHZ1 1483 aa22.41■■□□□ 1.18
HDAC6-215ENST00000465457 PTPRTO14522 1441 aa22.41■■□□□ 1.18
HDAC6-215ENST00000465457 LRRIQ1Q96JM4 1722 aa22.4■■□□□ 1.18
HDAC6-215ENST00000465457 REREQ9P2R6 1566 aa22.39■■□□□ 1.18
HDAC6-215ENST00000465457 DMRT2Q9Y5R5 561 aa22.39■■□□□ 1.17
HDAC6-215ENST00000465457 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
HDAC6-215ENST00000465457 CDC42BPBQ9Y5S2 1711 aa22.37■■□□□ 1.17
HDAC6-215ENST00000465457 AFAP1Q8N556 730 aa22.37■■□□□ 1.17
HDAC6-215ENST00000465457 NCOA1Q15788 1441 aa22.34■■□□□ 1.17
HDAC6-215ENST00000465457 EFCAB2Q5VUJ9 269 aa22.34■■□□□ 1.17
HDAC6-215ENST00000465457 IQSEC2Q5JU85 1478 aa22.32■■□□□ 1.16
HDAC6-215ENST00000465457 ITSN2Q9NZM3 1697 aa22.32■■□□□ 1.16
HDAC6-215ENST00000465457 CAMSAP1Q5T5Y3 1602 aa22.3■■□□□ 1.16
HDAC6-215ENST00000465457 KIDINS220Q9ULH0 1771 aa22.3■■□□□ 1.16
HDAC6-215ENST00000465457 ABCC1P33527 1531 aa22.29■■□□□ 1.16
HDAC6-215ENST00000465457 AGLP35573 1532 aa22.29■■□□□ 1.16
HDAC6-215ENST00000465457 EEA1Q15075 1411 aa22.29■■□□□ 1.16
HDAC6-215ENST00000465457 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
HDAC6-215ENST00000465457 TRAPPC8Q9Y2L5 1435 aa22.28■■□□□ 1.16
HDAC6-215ENST00000465457 MLH3Q9UHC1 1453 aa22.28■■□□□ 1.16
HDAC6-215ENST00000465457 TROQ12816 1431 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-215ENST00000465457 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
HDAC6-215ENST00000465457 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-215ENST00000465457 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
HDAC6-215ENST00000465457 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
HDAC6-215ENST00000465457 MYO3AQ8NEV4 1616 aa22.22■■□□□ 1.15
HDAC6-215ENST00000465457 ZNF335Q9H4Z2 1342 aaPredicted RBP22.22■■□□□ 1.15
HDAC6-215ENST00000465457 SUPT6HQ7KZ85 1726 aaKnown RBP22.22■■□□□ 1.15
HDAC6-215ENST00000465457 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
HDAC6-215ENST00000465457 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
HDAC6-215ENST00000465457 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.15
HDAC6-215ENST00000465457 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
HDAC6-215ENST00000465457 CLTCQ00610 1675 aaKnown RBP22.18■■□□□ 1.14
HDAC6-215ENST00000465457 CLIP1P30622 1438 aa22.17■■□□□ 1.14
HDAC6-215ENST00000465457 NCKAP5LQ9HCH0 1330 aa22.17■■□□□ 1.14
HDAC6-215ENST00000465457 CNTLNQ9NXG0 1405 aa22.16■■□□□ 1.14
HDAC6-215ENST00000465457 ESF1Q9H501 851 aaKnown RBP22.15■■□□□ 1.14
HDAC6-215ENST00000465457 SAMD9LQ8IVG5 1584 aa22.15■■□□□ 1.14
HDAC6-215ENST00000465457 NPATQ14207 1427 aa22.14■■□□□ 1.14
HDAC6-215ENST00000465457 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.13
HDAC6-215ENST00000465457 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.13
HDAC6-215ENST00000465457 MED1Q15648 1581 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-215ENST00000465457 CEP170BQ9Y4F5 1589 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-215ENST00000465457 SYCP2Q9BX26 1530 aa22.11■■□□□ 1.13
HDAC6-215ENST00000465457 TCOF1Q13428 1488 aaKnown RBP22.1■■□□□ 1.13
HDAC6-215ENST00000465457 ZMYM3Q14202 1370 aa22.09■■□□□ 1.13
HDAC6-215ENST00000465457 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
HDAC6-215ENST00000465457 PLXNC1O60486 1568 aa22.08■■□□□ 1.12
HDAC6-215ENST00000465457 INO80Q9ULG1 1556 aaPredicted RBP22.06■■□□□ 1.12
HDAC6-215ENST00000465457 PTPRKQ15262 1439 aa22.05■■□□□ 1.12
HDAC6-215ENST00000465457 UBTFP17480 764 aaKnown RBP22.04■■□□□ 1.12
HDAC6-215ENST00000465457 ATP7AQ04656 1500 aa22.04■■□□□ 1.12
HDAC6-215ENST00000465457 POLR1AO95602 1720 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-215ENST00000465457 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
HDAC6-215ENST00000465457 NEURL4Q96JN8 1562 aa22■■□□□ 1.11
HDAC6-215ENST00000465457 DNMT1P26358 1616 aaKnown RBP22■■□□□ 1.11
HDAC6-215ENST00000465457 HSPA1LP34931 641 aa22■■□□□ 1.11
HDAC6-215ENST00000465457 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
HDAC6-215ENST00000465457 PKD2Q13563 968 aa21.97■■□□□ 1.11
HDAC6-215ENST00000465457 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
HDAC6-215ENST00000465457 ALKQ9UM73 1620 aa21.97■■□□□ 1.11
HDAC6-215ENST00000465457 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
HDAC6-215ENST00000465457 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
HDAC6-215ENST00000465457 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
HDAC6-215ENST00000465457 A2MP01023 1474 aa21.96■■□□□ 1.11
HDAC6-215ENST00000465457 PIP4K2BP78356 416 aa21.95■■□□□ 1.1
HDAC6-215ENST00000465457 SPAG9O60271 1321 aaKnown RBP21.95■■□□□ 1.1
HDAC6-215ENST00000465457 GPATCH8Q9UKJ3 1502 aaKnown RBP21.95■■□□□ 1.1
HDAC6-215ENST00000465457 HNRNPMP52272 730 aaKnown RBP eCLIP21.93■■□□□ 1.1
HDAC6-215ENST00000465457 ADGBQ8N7X0 1667 aa21.92■■□□□ 1.1
HDAC6-215ENST00000465457 A2ML1A8K2U0 1454 aa21.92■■□□□ 1.1
HDAC6-215ENST00000465457 GGT6Q6P531 493 aa21.9■■□□□ 1.1
HDAC6-215ENST00000465457 VWDEQ8N2E2 1590 aa21.89■■□□□ 1.09
HDAC6-215ENST00000465457 CPS1P31327 1500 aa21.89■■□□□ 1.09
HDAC6-215ENST00000465457 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
HDAC6-215ENST00000465457 FYCO1Q9BQS8 1478 aa21.86■■□□□ 1.09
HDAC6-215ENST00000465457 STRCP1A6NGW2 1772 aa21.86■■□□□ 1.09
HDAC6-215ENST00000465457 KIAA1107Q9UPP5 1409 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms