RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 HSPA2P54652 639 aa33.52■■■□□ 2.96
CD58-204ENST00000464088 TTC37Q6PGP7 1564 aa33.51■■■□□ 2.96
CD58-204ENST00000464088 YEATS2Q9ULM3 1422 aa33.49■■■□□ 2.95
CD58-204ENST00000464088 FER1L4A9Z1Z3 1794 aa33.44■■■□□ 2.94
CD58-204ENST00000464088 HECW1Q76N89 1606 aa33.44■■■□□ 2.94
CD58-204ENST00000464088 CERKQ8TCT0 537 aa33.41■■■□□ 2.94
CD58-204ENST00000464088 PLPPR3Q6T4P5 718 aa33.37■■■□□ 2.93
CD58-204ENST00000464088 PLCH2O75038 1416 aa33.36■■■□□ 2.93
CD58-204ENST00000464088 SCAPERQ9BY12 1400 aa33.35■■■□□ 2.93
CD58-204ENST00000464088 ARHGEF12Q9NZN5 1544 aa33.34■■■□□ 2.93
CD58-204ENST00000464088 CASKIN1Q8WXD9 1431 aa33.33■■■□□ 2.93
CD58-204ENST00000464088 MLECQ14165 292 aa33.32■■■□□ 2.92
CD58-204ENST00000464088 ATP10AO60312 1499 aa33.31■■■□□ 2.92
CD58-204ENST00000464088 PREX1Q8TCU6 1659 aa33.31■■■□□ 2.92
CD58-204ENST00000464088 CDK13Q14004 1512 aaKnown RBP33.31■■■□□ 2.92
CD58-204ENST00000464088 LRRIQ1Q96JM4 1722 aa33.28■■■□□ 2.92
CD58-204ENST00000464088 C9orf84Q5VXU9 1444 aa33.28■■■□□ 2.92
CD58-204ENST00000464088 FYCO1Q9BQS8 1478 aa33.26■■■□□ 2.92
CD58-204ENST00000464088 MYO5CQ9NQX4 1742 aa33.24■■■□□ 2.91
CD58-204ENST00000464088 ATP1B4Q9UN42 357 aaPredicted RBP33.2■■■□□ 2.91
CD58-204ENST00000464088 STRCQ7RTU9 1775 aa33.19■■■□□ 2.9
CD58-204ENST00000464088 EFCAB2Q5VUJ9 269 aa33.19■■■□□ 2.9
CD58-204ENST00000464088 VPS8Q8N3P4 1428 aa33.17■■■□□ 2.9
CD58-204ENST00000464088 SETD1BQ9UPS6 1966 aaKnown RBP33.16■■■□□ 2.9
CD58-204ENST00000464088 CCDC18Q5T9S5 1454 aa33.14■■■□□ 2.9
CD58-204ENST00000464088 ZNF518AQ6AHZ1 1483 aa33.14■■■□□ 2.9
CD58-204ENST00000464088 CEBPAP49715 358 aaPredicted RBP33.14■■■□□ 2.9
CD58-204ENST00000464088 DMRT2Q9Y5R5 561 aa33.14■■■□□ 2.9
CD58-204ENST00000464088 KDM5CP41229 1560 aa33.13■■■□□ 2.89
CD58-204ENST00000464088 KIF14Q15058 1648 aa33.09■■■□□ 2.89
CD58-204ENST00000464088 CDK11AQ9UQ88 783 aaPredicted RBP33.08■■■□□ 2.89
CD58-204ENST00000464088 UHRF1BP1Q6BDS2 1440 aa33.08■■■□□ 2.89
CD58-204ENST00000464088 REREQ9P2R6 1566 aa33.08■■■□□ 2.89
CD58-204ENST00000464088 DIP2CQ9Y2E4 1556 aa33.04■■■□□ 2.88
CD58-204ENST00000464088 AFAP1Q8N556 730 aa33.03■■■□□ 2.88
CD58-204ENST00000464088 ARHGAP5Q13017 1502 aa33.02■■■□□ 2.88
CD58-204ENST00000464088 TROQ12816 1431 aaPredicted RBP33.02■■■□□ 2.88
CD58-204ENST00000464088 DISP3Q9P2K9 1392 aa33■■■□□ 2.87
CD58-204ENST00000464088 PTPRTO14522 1441 aa33■■■□□ 2.87
CD58-204ENST00000464088 C3P01024 1663 aa32.99■■■□□ 2.87
CD58-204ENST00000464088 ILDR2Q71H61 639 aa32.98■■■□□ 2.87
CD58-204ENST00000464088 MLH3Q9UHC1 1453 aa32.98■■■□□ 2.87
CD58-204ENST00000464088 ABCA6Q8N139 1617 aa32.97■■■□□ 2.87
CD58-204ENST00000464088 CDC42BPBQ9Y5S2 1711 aa32.96■■■□□ 2.87
CD58-204ENST00000464088 AGLP35573 1532 aa32.95■■■□□ 2.87
CD58-204ENST00000464088 SOCS7O14512 581 aa32.93■■■□□ 2.86
CD58-204ENST00000464088 TIAM1Q13009 1591 aa32.9■■■□□ 2.86
CD58-204ENST00000464088 TRAPPC8Q9Y2L5 1435 aa32.88■■■□□ 2.85
CD58-204ENST00000464088 MYT1LQ9UL68 1186 aa32.88■■■□□ 2.85
CD58-204ENST00000464088 LTBP4Q8N2S1 1624 aa32.88■■■□□ 2.85
CD58-204ENST00000464088 PREX2Q70Z35 1606 aa32.87■■■□□ 2.85
CD58-204ENST00000464088 MAP3K1Q13233 1512 aa32.87■■■□□ 2.85
CD58-204ENST00000464088 ABCC1P33527 1531 aa32.86■■■□□ 2.85
CD58-204ENST00000464088 IQSEC2Q5JU85 1478 aa32.85■■■□□ 2.85
CD58-204ENST00000464088 ITSN2Q9NZM3 1697 aa32.85■■■□□ 2.85
CD58-204ENST00000464088 SPATA31D1Q6ZQQ2 1576 aa32.83■■■□□ 2.85
CD58-204ENST00000464088 KIDINS220Q9ULH0 1771 aa32.82■■■□□ 2.84
CD58-204ENST00000464088 NCOA1Q15788 1441 aa32.81■■■□□ 2.84
CD58-204ENST00000464088 ESF1Q9H501 851 aaKnown RBP32.81■■■□□ 2.84
CD58-204ENST00000464088 CNTLNQ9NXG0 1405 aa32.81■■■□□ 2.84
CD58-204ENST00000464088 EHBP1L1Q8N3D4 1523 aa32.8■■■□□ 2.84
CD58-204ENST00000464088 MTUS2Q5JR59 1369 aa32.8■■■□□ 2.84
CD58-204ENST00000464088 MROH2AA6NES4 1674 aa32.75■■■□□ 2.83
CD58-204ENST00000464088 LRRC9Q6ZRR7 1453 aa32.74■■■□□ 2.83
CD58-204ENST00000464088 NPATQ14207 1427 aa32.73■■■□□ 2.83
CD58-204ENST00000464088 CDC42BPAQ5VT25 1732 aa32.73■■■□□ 2.83
CD58-204ENST00000464088 CAMSAP1Q5T5Y3 1602 aa32.69■■■□□ 2.82
CD58-204ENST00000464088 KANK4Q5T7N3 995 aaPredicted RBP32.68■■■□□ 2.82
CD58-204ENST00000464088 SAMD9LQ8IVG5 1584 aa32.66■■■□□ 2.82
CD58-204ENST00000464088 SUPT6HQ7KZ85 1726 aaKnown RBP32.65■■■□□ 2.82
CD58-204ENST00000464088 APLP2Q06481 763 aa32.64■■■□□ 2.82
CD58-204ENST00000464088 ZMYM3Q14202 1370 aa32.62■■■□□ 2.81
CD58-204ENST00000464088 GPATCH8Q9UKJ3 1502 aaKnown RBP32.61■■■□□ 2.81
CD58-204ENST00000464088 NCOA2Q15596 1464 aa32.6■■■□□ 2.81
CD58-204ENST00000464088 ZNF142P52746 1687 aaPredicted RBP32.58■■■□□ 2.81
CD58-204ENST00000464088 SYCP2Q9BX26 1530 aa32.56■■■□□ 2.8
CD58-204ENST00000464088 PLA2R1Q13018 1463 aa32.55■■■□□ 2.8
CD58-204ENST00000464088 CCNB3Q8WWL7 1395 aa32.55■■■□□ 2.8
CD58-204ENST00000464088 MYO3AQ8NEV4 1616 aa32.54■■■□□ 2.8
CD58-204ENST00000464088 PLXNC1O60486 1568 aa32.53■■■□□ 2.8
CD58-204ENST00000464088 SPAG9O60271 1321 aaKnown RBP32.53■■■□□ 2.8
CD58-204ENST00000464088 NCKAP5LQ9HCH0 1330 aa32.53■■■□□ 2.8
CD58-204ENST00000464088 CLTCQ00610 1675 aaKnown RBP32.53■■■□□ 2.8
CD58-204ENST00000464088 ZNF335Q9H4Z2 1342 aaPredicted RBP32.51■■■□□ 2.8
CD58-204ENST00000464088 PKD2Q13563 968 aa32.51■■■□□ 2.79
CD58-204ENST00000464088 ATP7AQ04656 1500 aa32.51■■■□□ 2.79
CD58-204ENST00000464088 TCOF1Q13428 1488 aaKnown RBP32.5■■■□□ 2.79
CD58-204ENST00000464088 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
CD58-204ENST00000464088 ZNF777Q9ULD5 760 aaPredicted RBP32.49■■■□□ 2.79
CD58-204ENST00000464088 KIAA1107Q9UPP5 1409 aa32.49■■■□□ 2.79
CD58-204ENST00000464088 CEP170BQ9Y4F5 1589 aaPredicted RBP32.49■■■□□ 2.79
CD58-204ENST00000464088 PTPRKQ15262 1439 aa32.48■■■□□ 2.79
CD58-204ENST00000464088 HNRNPMP52272 730 aaKnown RBP eCLIP32.47■■■□□ 2.79
CD58-204ENST00000464088 A2MP01023 1474 aa32.46■■■□□ 2.79
CD58-204ENST00000464088 UBAP1LF5GYI3 381 aa32.45■■■□□ 2.79
CD58-204ENST00000464088 PLEKHH2Q8IVE3 1493 aa32.44■■■□□ 2.78
CD58-204ENST00000464088 CFDP1Q9UEE9 299 aaPredicted RBP32.42■■■□□ 2.78
CD58-204ENST00000464088 PPP6R1Q9UPN7 881 aa32.41■■■□□ 2.78
CD58-204ENST00000464088 ADGBQ8N7X0 1667 aa32.38■■■□□ 2.77
CD58-204ENST00000464088 MYOM3Q5VTT5 1437 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms