RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 ATP10BO94823 1461 aa11.65□□□□□ -0.55
PRPF4B-203ENST00000463634 TRIM52Q96A61 297 aa11.65□□□□□ -0.55
PRPF4B-203ENST00000463634 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.55
PRPF4B-203ENST00000463634 DENND4BO75064 1496 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-203ENST00000463634 CAMSAP2Q08AD1 1489 aa11.64□□□□□ -0.55
PRPF4B-203ENST00000463634 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-203ENST00000463634 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-203ENST00000463634 ITSN2Q9NZM3 1697 aa11.64□□□□□ -0.55
PRPF4B-203ENST00000463634 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
PRPF4B-203ENST00000463634 PTPRGP23470 1445 aa11.63□□□□□ -0.55
PRPF4B-203ENST00000463634 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
PRPF4B-203ENST00000463634 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
PRPF4B-203ENST00000463634 PLEKHD1A6NEE1 506 aa11.62□□□□□ -0.55
PRPF4B-203ENST00000463634 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
PRPF4B-203ENST00000463634 MPHOSPH9Q99550 1183 aa11.6□□□□□ -0.55
PRPF4B-203ENST00000463634 SHROOM2Q13796 1616 aa11.59□□□□□ -0.55
PRPF4B-203ENST00000463634 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
PRPF4B-203ENST00000463634 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
PRPF4B-203ENST00000463634 FOXD1Q16676 465 aa11.59□□□□□ -0.55
PRPF4B-203ENST00000463634 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
PRPF4B-203ENST00000463634 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
PRPF4B-203ENST00000463634 KDM5BQ9UGL1 1544 aa11.57□□□□□ -0.56
PRPF4B-203ENST00000463634 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
PRPF4B-203ENST00000463634 NCOA1Q15788 1441 aa11.56□□□□□ -0.56
PRPF4B-203ENST00000463634 ADGBQ8N7X0 1667 aa11.56□□□□□ -0.56
PRPF4B-203ENST00000463634 ADGRL2O95490 1459 aa11.53□□□□□ -0.56
PRPF4B-203ENST00000463634 DDX10Q13206 875 aaKnown RBP11.53□□□□□ -0.56
PRPF4B-203ENST00000463634 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.56
PRPF4B-203ENST00000463634 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
PRPF4B-203ENST00000463634 CLASP1Q7Z460 1538 aa11.51□□□□□ -0.57
PRPF4B-203ENST00000463634 ANKRD30BQ9BXX2 1392 aa11.51□□□□□ -0.57
PRPF4B-203ENST00000463634 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
PRPF4B-203ENST00000463634 PZPP20742 1482 aa11.5□□□□□ -0.57
PRPF4B-203ENST00000463634 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
PRPF4B-203ENST00000463634 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRPF4B-203ENST00000463634 C9orf84Q5VXU9 1444 aa11.5□□□□□ -0.57
PRPF4B-203ENST00000463634 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
PRPF4B-203ENST00000463634 CDC42BPBQ9Y5S2 1711 aa11.49□□□□□ -0.57
PRPF4B-203ENST00000463634 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
PRPF4B-203ENST00000463634 SAMD9LQ8IVG5 1584 aa11.49□□□□□ -0.57
PRPF4B-203ENST00000463634 SHANK2Q9UPX8 1470 aa11.49□□□□□ -0.57
PRPF4B-203ENST00000463634 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
PRPF4B-203ENST00000463634 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-203ENST00000463634 ANKRD50Q9ULJ7 1429 aa11.48□□□□□ -0.57
PRPF4B-203ENST00000463634 MBD5Q9P267 1494 aa11.47□□□□□ -0.57
PRPF4B-203ENST00000463634 TSPY4P0CV99 314 aa11.47□□□□□ -0.57
PRPF4B-203ENST00000463634 TSPY10P0CW01 314 aa11.47□□□□□ -0.57
PRPF4B-203ENST00000463634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRPF4B-203ENST00000463634 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
PRPF4B-203ENST00000463634 ARHGEF5Q12774 1597 aa11.46□□□□□ -0.57
PRPF4B-203ENST00000463634 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
PRPF4B-203ENST00000463634 ARHGAP5Q13017 1502 aa11.45□□□□□ -0.58
PRPF4B-203ENST00000463634 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
PRPF4B-203ENST00000463634 ZCCHC11Q5TAX3 1644 aaKnown RBP11.44□□□□□ -0.58
PRPF4B-203ENST00000463634 CCDC141Q6ZP82 1450 aa11.44□□□□□ -0.58
PRPF4B-203ENST00000463634 SYCP2Q9BX26 1530 aa11.44□□□□□ -0.58
PRPF4B-203ENST00000463634 PKD2Q13563 968 aa11.44□□□□□ -0.58
PRPF4B-203ENST00000463634 KIAA1107Q9UPP5 1409 aa11.43□□□□□ -0.58
PRPF4B-203ENST00000463634 NUP155O75694 1391 aa11.43□□□□□ -0.58
PRPF4B-203ENST00000463634 HSPA5P11021 654 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-203ENST00000463634 MYO5CQ9NQX4 1742 aa11.42□□□□□ -0.58
PRPF4B-203ENST00000463634 NBPF8Q3BBV2 869 aa11.42□□□□□ -0.58
PRPF4B-203ENST00000463634 UHRF1BP1LA0JNW5 1464 aa11.41□□□□□ -0.58
PRPF4B-203ENST00000463634 EIF4G2P78344 907 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRPF4B-203ENST00000463634 KDM5DQ9BY66 1539 aa11.38□□□□□ -0.59
PRPF4B-203ENST00000463634 RSPH4AQ5TD94 716 aa11.38□□□□□ -0.59
PRPF4B-203ENST00000463634 WASHC2AQ641Q2 1341 aa11.38□□□□□ -0.59
PRPF4B-203ENST00000463634 ARHGEF12Q9NZN5 1544 aa11.38□□□□□ -0.59
PRPF4B-203ENST00000463634 ANP32CO43423 234 aa11.37□□□□□ -0.59
PRPF4B-203ENST00000463634 PLCH2O75038 1416 aa11.37□□□□□ -0.59
PRPF4B-203ENST00000463634 MAST1Q9Y2H9 1570 aa11.36□□□□□ -0.59
PRPF4B-203ENST00000463634 PLEKHH2Q8IVE3 1493 aa11.36□□□□□ -0.59
PRPF4B-203ENST00000463634 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
PRPF4B-203ENST00000463634 FAM135AQ9P2D6 1515 aa11.35□□□□□ -0.59
PRPF4B-203ENST00000463634 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
PRPF4B-203ENST00000463634 EFCAB2Q5VUJ9 269 aa11.33□□□□□ -0.6
PRPF4B-203ENST00000463634 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
PRPF4B-203ENST00000463634 ABCC1P33527 1531 aa11.33□□□□□ -0.6
PRPF4B-203ENST00000463634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.66e-8■■□□□ 14.1
PRPF4B-203ENST00000463634 SPATA31E1Q6ZUB1 1445 aa11.32□□□□□ -0.6
PRPF4B-203ENST00000463634 TRAPPC8Q9Y2L5 1435 aa11.32□□□□□ -0.6
PRPF4B-203ENST00000463634 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
PRPF4B-203ENST00000463634 UNC13BO14795 1591 aa11.32□□□□□ -0.6
PRPF4B-203ENST00000463634 WDR7Q9Y4E6 1490 aa11.31□□□□□ -0.6
PRPF4B-203ENST00000463634 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
PRPF4B-203ENST00000463634 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
PRPF4B-203ENST00000463634 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
PRPF4B-203ENST00000463634 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
PRPF4B-203ENST00000463634 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
PRPF4B-203ENST00000463634 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
PRPF4B-203ENST00000463634 USP47Q96K76 1375 aa11.28□□□□□ -0.6
PRPF4B-203ENST00000463634 UHRF1BP1Q6BDS2 1440 aa11.28□□□□□ -0.6
PRPF4B-203ENST00000463634 IQGAP3Q86VI3 1631 aa11.27□□□□□ -0.6
PRPF4B-203ENST00000463634 ERBINQ96RT1 1412 aa11.27□□□□□ -0.61
PRPF4B-203ENST00000463634 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
PRPF4B-203ENST00000463634 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.61
PRPF4B-203ENST00000463634 PLA2R1Q13018 1463 aa11.27□□□□□ -0.61
PRPF4B-203ENST00000463634 ARAP3Q8WWN8 1544 aa11.27□□□□□ -0.61
PRPF4B-203ENST00000463634 SPAG9O60271 1321 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-203ENST00000463634 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms