RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
HDAC6-213ENST00000462730 DAPK1P53355 1430 aa21.34■■□□□ 1.01
HDAC6-213ENST00000462730 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1
HDAC6-213ENST00000462730 MYO5CQ9NQX4 1742 aa21.31■■□□□ 1
HDAC6-213ENST00000462730 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
HDAC6-213ENST00000462730 ABCC5O15440 1437 aa21.3■■□□□ 1
HDAC6-213ENST00000462730 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
HDAC6-213ENST00000462730 NAIPQ13075 1403 aa21.3■■□□□ 1
HDAC6-213ENST00000462730 CROCC2H7BZ55 1655 aa21.29■■□□□ 1
HDAC6-213ENST00000462730 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
HDAC6-213ENST00000462730 AKNAQ7Z591 1439 aa21.29■■□□□ 1
HDAC6-213ENST00000462730 KCNH8Q96L42 1107 aa21.27■■□□□ 1
HDAC6-213ENST00000462730 CHIC2Q9UKJ5 165 aa21.27■■□□□ 1
HDAC6-213ENST00000462730 MAPKBP1O60336 1514 aa21.27■□□□□ 0.99
HDAC6-213ENST00000462730 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
HDAC6-213ENST00000462730 ARHGAP5Q13017 1502 aa21.25■□□□□ 0.99
HDAC6-213ENST00000462730 RIMBP3CA6NJZ7 1639 aa21.25■□□□□ 0.99
HDAC6-213ENST00000462730 RIMBP3BA6NNM3 1639 aa21.25■□□□□ 0.99
HDAC6-213ENST00000462730 RIMBP3Q9UFD9 1639 aa21.25■□□□□ 0.99
HDAC6-213ENST00000462730 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
HDAC6-213ENST00000462730 ASXL2Q76L83 1435 aa21.23■□□□□ 0.99
HDAC6-213ENST00000462730 ROCK1Q13464 1354 aa21.22■□□□□ 0.99
HDAC6-213ENST00000462730 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
HDAC6-213ENST00000462730 ARHGEF5Q12774 1597 aa21.2■□□□□ 0.98
HDAC6-213ENST00000462730 SHANK2Q9UPX8 1470 aa21.18■□□□□ 0.98
HDAC6-213ENST00000462730 KDM6BO15054 1643 aa21.18■□□□□ 0.98
HDAC6-213ENST00000462730 PLCH2O75038 1416 aa21.18■□□□□ 0.98
HDAC6-213ENST00000462730 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
HDAC6-213ENST00000462730 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
HDAC6-213ENST00000462730 SYCP2Q9BX26 1530 aa21.17■□□□□ 0.98
HDAC6-213ENST00000462730 MBD5Q9P267 1494 aa21.17■□□□□ 0.98
HDAC6-213ENST00000462730 ADGRL2O95490 1459 aa21.17■□□□□ 0.98
HDAC6-213ENST00000462730 ARAP3Q8WWN8 1544 aa21.15■□□□□ 0.98
HDAC6-213ENST00000462730 CCDC141Q6ZP82 1450 aa21.14■□□□□ 0.98
HDAC6-213ENST00000462730 C9orf84Q5VXU9 1444 aa21.13■□□□□ 0.97
HDAC6-213ENST00000462730 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
HDAC6-213ENST00000462730 HNRNPMP52272 730 aaKnown RBP eCLIP21.12■□□□□ 0.97
HDAC6-213ENST00000462730 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
HDAC6-213ENST00000462730 ABCC1P33527 1531 aa21.1■□□□□ 0.97
HDAC6-213ENST00000462730 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
HDAC6-213ENST00000462730 KIAA1107Q9UPP5 1409 aa21.09■□□□□ 0.97
HDAC6-213ENST00000462730 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-213ENST00000462730 ANKRD30AQ9BXX3 1397 aa21.09■□□□□ 0.97
HDAC6-213ENST00000462730 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
HDAC6-213ENST00000462730 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
HDAC6-213ENST00000462730 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
HDAC6-213ENST00000462730 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
HDAC6-213ENST00000462730 MYT1Q01538 1121 aa21.06■□□□□ 0.96
HDAC6-213ENST00000462730 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
HDAC6-213ENST00000462730 RSPH4AQ5TD94 716 aa21.05■□□□□ 0.96
HDAC6-213ENST00000462730 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
HDAC6-213ENST00000462730 FANCAO15360 1455 aa21.04■□□□□ 0.96
HDAC6-213ENST00000462730 NEUROD1Q13562 356 aa21.02■□□□□ 0.96
HDAC6-213ENST00000462730 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
HDAC6-213ENST00000462730 ANKRD50Q9ULJ7 1429 aa21■□□□□ 0.95
HDAC6-213ENST00000462730 KIF15Q9NS87 1388 aa21■□□□□ 0.95
HDAC6-213ENST00000462730 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
HDAC6-213ENST00000462730 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
HDAC6-213ENST00000462730 DENND4BO75064 1496 aaPredicted RBP20.98■□□□□ 0.95
HDAC6-213ENST00000462730 TRAPPC8Q9Y2L5 1435 aa20.98■□□□□ 0.95
HDAC6-213ENST00000462730 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
HDAC6-213ENST00000462730 DIEXFQ68CQ4 756 aaKnown RBP20.96■□□□□ 0.95
HDAC6-213ENST00000462730 CD109Q6YHK3 1445 aa20.96■□□□□ 0.95
HDAC6-213ENST00000462730 ADGRL1O94910 1474 aa20.96■□□□□ 0.95
HDAC6-213ENST00000462730 CFAP74Q9C0B2 1584 aa20.96■□□□□ 0.95
HDAC6-213ENST00000462730 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
HDAC6-213ENST00000462730 ZFYVE16Q7Z3T8 1539 aa20.92■□□□□ 0.94
HDAC6-213ENST00000462730 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
HDAC6-213ENST00000462730 MAP3K4Q9Y6R4 1608 aa20.91■□□□□ 0.94
HDAC6-213ENST00000462730 PZPP20742 1482 aa20.9■□□□□ 0.94
HDAC6-213ENST00000462730 SCAPERQ9BY12 1400 aa20.9■□□□□ 0.94
HDAC6-213ENST00000462730 GLI2P10070 1586 aa20.89■□□□□ 0.94
HDAC6-213ENST00000462730 INO80Q9ULG1 1556 aaPredicted RBP20.89■□□□□ 0.93
HDAC6-213ENST00000462730 DIP2BQ9P265 1576 aa20.88■□□□□ 0.93
HDAC6-213ENST00000462730 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
HDAC6-213ENST00000462730 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
HDAC6-213ENST00000462730 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
HDAC6-213ENST00000462730 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
HDAC6-213ENST00000462730 RTEL1-TNFRSF6BF6WH68 1400 aa20.86■□□□□ 0.93
HDAC6-213ENST00000462730 ATP7AQ04656 1500 aa20.86■□□□□ 0.93
HDAC6-213ENST00000462730 SPAG9O60271 1321 aaKnown RBP20.86■□□□□ 0.93
HDAC6-213ENST00000462730 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
HDAC6-213ENST00000462730 UNC13BO14795 1591 aa20.84■□□□□ 0.93
HDAC6-213ENST00000462730 ERBINQ96RT1 1412 aa20.83■□□□□ 0.93
HDAC6-213ENST00000462730 ZNF518AQ6AHZ1 1483 aa20.83■□□□□ 0.93
HDAC6-213ENST00000462730 NEO1Q92859 1461 aa20.83■□□□□ 0.93
HDAC6-213ENST00000462730 NUP155O75694 1391 aa20.82■□□□□ 0.92
HDAC6-213ENST00000462730 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-213ENST00000462730 FOXD1Q16676 465 aa20.82■□□□□ 0.92
HDAC6-213ENST00000462730 POGZQ7Z3K3 1410 aa20.81■□□□□ 0.92
HDAC6-213ENST00000462730 KDM5CP41229 1560 aa20.8■□□□□ 0.92
HDAC6-213ENST00000462730 KIDINS220Q9ULH0 1771 aa20.78■□□□□ 0.92
HDAC6-213ENST00000462730 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
HDAC6-213ENST00000462730 ANKRD30BQ9BXX2 1392 aa20.78■□□□□ 0.92
HDAC6-213ENST00000462730 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
HDAC6-213ENST00000462730 MAGI2Q86UL8 1455 aa20.76■□□□□ 0.91
HDAC6-213ENST00000462730 HECW2Q9P2P5 1572 aa20.75■□□□□ 0.91
HDAC6-213ENST00000462730 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
HDAC6-213ENST00000462730 PPRC1Q5VV67 1664 aaKnown RBP20.74■□□□□ 0.91
HDAC6-213ENST00000462730 PKD2Q13563 968 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms