RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
SND1-202ENST00000461056 NCOA2Q15596 1464 aa12.93□□□□□ -0.34
SND1-202ENST00000461056 PHLDB1Q86UU1 1377 aa12.92□□□□□ -0.34
SND1-202ENST00000461056 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
SND1-202ENST00000461056 FANCAO15360 1455 aa12.91□□□□□ -0.34
SND1-202ENST00000461056 FRMPD1Q5SYB0 1578 aa12.9□□□□□ -0.35
SND1-202ENST00000461056 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
SND1-202ENST00000461056 ARHGEF12Q9NZN5 1544 aa12.88□□□□□ -0.35
SND1-202ENST00000461056 TSPOAP1O95153 1857 aa12.88□□□□□ -0.35
SND1-202ENST00000461056 CDC42BPAQ5VT25 1732 aa12.87□□□□□ -0.35
SND1-202ENST00000461056 MYO5CQ9NQX4 1742 aa12.87□□□□□ -0.35
SND1-202ENST00000461056 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
SND1-202ENST00000461056 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
SND1-202ENST00000461056 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
SND1-202ENST00000461056 KDM6BO15054 1643 aa12.86□□□□□ -0.35
SND1-202ENST00000461056 ABCC1P33527 1531 aa12.86□□□□□ -0.35
SND1-202ENST00000461056 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
SND1-202ENST00000461056 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
SND1-202ENST00000461056 EFCAB2Q5VUJ9 269 aa12.85□□□□□ -0.35
SND1-202ENST00000461056 POGZQ7Z3K3 1410 aa12.85□□□□□ -0.35
SND1-202ENST00000461056 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
SND1-202ENST00000461056 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
SND1-202ENST00000461056 MYOM3Q5VTT5 1437 aa12.84□□□□□ -0.35
SND1-202ENST00000461056 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
SND1-202ENST00000461056 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
SND1-202ENST00000461056 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
SND1-202ENST00000461056 KDM5CP41229 1560 aa12.82□□□□□ -0.36
SND1-202ENST00000461056 MIA2Q96PC5 1412 aa12.82□□□□□ -0.36
SND1-202ENST00000461056 SCAPERQ9BY12 1400 aa12.82□□□□□ -0.36
SND1-202ENST00000461056 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
SND1-202ENST00000461056 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
SND1-202ENST00000461056 TRAPPC8Q9Y2L5 1435 aa12.81□□□□□ -0.36
SND1-202ENST00000461056 RICTORQ6R327 1708 aa12.81□□□□□ -0.36
SND1-202ENST00000461056 RAPGEF3O95398 923 aa12.8□□□□□ -0.36
SND1-202ENST00000461056 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
SND1-202ENST00000461056 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
SND1-202ENST00000461056 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
SND1-202ENST00000461056 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
SND1-202ENST00000461056 TCOF1Q13428 1488 aaKnown RBP12.79□□□□□ -0.36
SND1-202ENST00000461056 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
SND1-202ENST00000461056 SYCP2Q9BX26 1530 aa12.79□□□□□ -0.36
SND1-202ENST00000461056 APLP2Q06481 763 aa12.78□□□□□ -0.36
SND1-202ENST00000461056 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
SND1-202ENST00000461056 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
SND1-202ENST00000461056 MLH3Q9UHC1 1453 aa12.76□□□□□ -0.37
SND1-202ENST00000461056 ARHGEF5Q12774 1597 aa12.75□□□□□ -0.37
SND1-202ENST00000461056 AFAP1Q8N556 730 aa12.75□□□□□ -0.37
SND1-202ENST00000461056 ARHGEF40Q8TER5 1519 aa12.75□□□□□ -0.37
SND1-202ENST00000461056 YEATS2Q9ULM3 1422 aa12.75□□□□□ -0.37
SND1-202ENST00000461056 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.37
SND1-202ENST00000461056 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
SND1-202ENST00000461056 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
SND1-202ENST00000461056 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
SND1-202ENST00000461056 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
SND1-202ENST00000461056 RRBP1Q9P2E9 1410 aaKnown RBP12.71□□□□□ -0.37
SND1-202ENST00000461056 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
SND1-202ENST00000461056 MAPK8IP2Q13387 824 aaPredicted RBP12.71□□□□□ -0.37
SND1-202ENST00000461056 ABCC5O15440 1437 aa12.71□□□□□ -0.38
SND1-202ENST00000461056 HECW2Q9P2P5 1572 aa12.7□□□□□ -0.38
SND1-202ENST00000461056 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
SND1-202ENST00000461056 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
SND1-202ENST00000461056 RTEL1-TNFRSF6BF6WH68 1400 aa12.7□□□□□ -0.38
SND1-202ENST00000461056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
SND1-202ENST00000461056 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
SND1-202ENST00000461056 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
SND1-202ENST00000461056 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
SND1-202ENST00000461056 ABCA6Q8N139 1617 aa12.69□□□□□ -0.38
SND1-202ENST00000461056 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
SND1-202ENST00000461056 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
SND1-202ENST00000461056 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
SND1-202ENST00000461056 DAPK1P53355 1430 aa12.67□□□□□ -0.38
SND1-202ENST00000461056 PTPRKQ15262 1439 aa12.67□□□□□ -0.38
SND1-202ENST00000461056 PLXNC1O60486 1568 aa12.67□□□□□ -0.38
SND1-202ENST00000461056 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
SND1-202ENST00000461056 ATP10AO60312 1499 aa12.66□□□□□ -0.38
SND1-202ENST00000461056 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
SND1-202ENST00000461056 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
SND1-202ENST00000461056 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
SND1-202ENST00000461056 AGLP35573 1532 aa12.64□□□□□ -0.39
SND1-202ENST00000461056 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
SND1-202ENST00000461056 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
SND1-202ENST00000461056 A2MP01023 1474 aa12.6□□□□□ -0.39
SND1-202ENST00000461056 NCOA1Q15788 1441 aa12.6□□□□□ -0.39
SND1-202ENST00000461056 DHX29Q7Z478 1369 aaKnown RBP12.59□□□□□ -0.39
SND1-202ENST00000461056 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
SND1-202ENST00000461056 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
SND1-202ENST00000461056 ROCK1Q13464 1354 aa12.58□□□□□ -0.4
SND1-202ENST00000461056 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
SND1-202ENST00000461056 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
SND1-202ENST00000461056 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
SND1-202ENST00000461056 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
SND1-202ENST00000461056 TSPY4P0CV99 314 aa12.56□□□□□ -0.4
SND1-202ENST00000461056 TSPY10P0CW01 314 aa12.56□□□□□ -0.4
SND1-202ENST00000461056 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
SND1-202ENST00000461056 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
SND1-202ENST00000461056 ERBINQ96RT1 1412 aa12.54□□□□□ -0.4
SND1-202ENST00000461056 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
SND1-202ENST00000461056 MROH1Q8NDA8 1641 aa12.54□□□□□ -0.4
SND1-202ENST00000461056 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
SND1-202ENST00000461056 RNF17Q9BXT8 1623 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 297.8 ms