RNA–Protein interactions for RNA: ENST00000460828.5

PCMT1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-204ENST00000460828 CDK13Q14004 1512 aaKnown RBP28.42■■■□□ 2.14
PCMT1-204ENST00000460828 SCAPERQ9BY12 1400 aa28.41■■■□□ 2.14
PCMT1-204ENST00000460828 EEA1Q15075 1411 aa28.4■■■□□ 2.14
PCMT1-204ENST00000460828 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
PCMT1-204ENST00000460828 MYO5CQ9NQX4 1742 aa28.37■■■□□ 2.13
PCMT1-204ENST00000460828 ARHGEF12Q9NZN5 1544 aa28.37■■■□□ 2.13
PCMT1-204ENST00000460828 ATP10AO60312 1499 aa28.35■■■□□ 2.13
PCMT1-204ENST00000460828 PLCH2O75038 1416 aa28.35■■■□□ 2.13
PCMT1-204ENST00000460828 DISP3Q9P2K9 1392 aa28.3■■■□□ 2.12
PCMT1-204ENST00000460828 ATP1B4Q9UN42 357 aaPredicted RBP28.29■■■□□ 2.12
PCMT1-204ENST00000460828 UHRF1BP1Q6BDS2 1440 aa28.26■■■□□ 2.12
PCMT1-204ENST00000460828 CEBPAP49715 358 aaPredicted RBP28.26■■■□□ 2.11
PCMT1-204ENST00000460828 MYT1LQ9UL68 1186 aa28.26■■■□□ 2.11
PCMT1-204ENST00000460828 EFCAB2Q5VUJ9 269 aa28.25■■■□□ 2.11
PCMT1-204ENST00000460828 DMRT2Q9Y5R5 561 aa28.25■■■□□ 2.11
PCMT1-204ENST00000460828 KIF14Q15058 1648 aa28.25■■■□□ 2.11
PCMT1-204ENST00000460828 ZNF518AQ6AHZ1 1483 aa28.24■■■□□ 2.11
PCMT1-204ENST00000460828 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
PCMT1-204ENST00000460828 ARHGAP5Q13017 1502 aa28.23■■■□□ 2.11
PCMT1-204ENST00000460828 CDK11AQ9UQ88 783 aaPredicted RBP28.19■■■□□ 2.1
PCMT1-204ENST00000460828 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
PCMT1-204ENST00000460828 KDM5CP41229 1560 aa28.17■■■□□ 2.1
PCMT1-204ENST00000460828 DIP2CQ9Y2E4 1556 aa28.16■■■□□ 2.1
PCMT1-204ENST00000460828 SPATA31D1Q6ZQQ2 1576 aa28.15■■■□□ 2.1
PCMT1-204ENST00000460828 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
PCMT1-204ENST00000460828 CLIP1P30622 1438 aa28.14■■■□□ 2.1
PCMT1-204ENST00000460828 C3P01024 1663 aa28.13■■■□□ 2.09
PCMT1-204ENST00000460828 SETD1BQ9UPS6 1966 aaKnown RBP28.12■■■□□ 2.09
PCMT1-204ENST00000460828 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
PCMT1-204ENST00000460828 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
PCMT1-204ENST00000460828 ABCA6Q8N139 1617 aa28.11■■■□□ 2.09
PCMT1-204ENST00000460828 AFAP1Q8N556 730 aa28.11■■■□□ 2.09
PCMT1-204ENST00000460828 SOCS7O14512 581 aa28.1■■■□□ 2.09
PCMT1-204ENST00000460828 REREQ9P2R6 1566 aa28.1■■■□□ 2.09
PCMT1-204ENST00000460828 TROQ12816 1431 aaPredicted RBP28.09■■■□□ 2.09
PCMT1-204ENST00000460828 UBTFP17480 764 aaKnown RBP28.08■■■□□ 2.09
PCMT1-204ENST00000460828 PTPRTO14522 1441 aa28.07■■■□□ 2.08
PCMT1-204ENST00000460828 CDC42BPBQ9Y5S2 1711 aa28.04■■■□□ 2.08
PCMT1-204ENST00000460828 ARHGAP35Q9NRY4 1499 aa28.04■■■□□ 2.08
PCMT1-204ENST00000460828 MLH3Q9UHC1 1453 aa28.02■■■□□ 2.08
PCMT1-204ENST00000460828 LRRIQ1Q96JM4 1722 aa28.01■■■□□ 2.07
PCMT1-204ENST00000460828 ITSN2Q9NZM3 1697 aa28.01■■■□□ 2.07
PCMT1-204ENST00000460828 PREX2Q70Z35 1606 aa28.01■■■□□ 2.07
PCMT1-204ENST00000460828 ABCC1P33527 1531 aa28■■■□□ 2.07
PCMT1-204ENST00000460828 AGLP35573 1532 aa27.99■■■□□ 2.07
PCMT1-204ENST00000460828 TRAPPC8Q9Y2L5 1435 aa27.98■■■□□ 2.07
PCMT1-204ENST00000460828 LTBP4Q8N2S1 1624 aa27.96■■■□□ 2.07
PCMT1-204ENST00000460828 CNTLNQ9NXG0 1405 aa27.95■■■□□ 2.07
PCMT1-204ENST00000460828 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.06
PCMT1-204ENST00000460828 NCOA1Q15788 1441 aa27.94■■■□□ 2.06
PCMT1-204ENST00000460828 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
PCMT1-204ENST00000460828 CAMSAP1Q5T5Y3 1602 aa27.9■■■□□ 2.06
PCMT1-204ENST00000460828 MROH2AA6NES4 1674 aa27.88■■■□□ 2.05
PCMT1-204ENST00000460828 CCDC18Q5T9S5 1454 aa27.88■■■□□ 2.05
PCMT1-204ENST00000460828 CDC42BPAQ5VT25 1732 aa27.87■■■□□ 2.05
PCMT1-204ENST00000460828 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
PCMT1-204ENST00000460828 NPATQ14207 1427 aa27.83■■■□□ 2.05
PCMT1-204ENST00000460828 SAMD9LQ8IVG5 1584 aa27.82■■■□□ 2.04
PCMT1-204ENST00000460828 CLTCQ00610 1675 aaKnown RBP27.79■■■□□ 2.04
PCMT1-204ENST00000460828 ZNF777Q9ULD5 760 aaPredicted RBP27.79■■■□□ 2.04
PCMT1-204ENST00000460828 MYO3AQ8NEV4 1616 aa27.78■■■□□ 2.04
PCMT1-204ENST00000460828 SYCP2Q9BX26 1530 aa27.78■■■□□ 2.04
PCMT1-204ENST00000460828 CASKIN1Q8WXD9 1431 aa27.77■■■□□ 2.04
PCMT1-204ENST00000460828 ZNF142P52746 1687 aaPredicted RBP27.77■■■□□ 2.04
PCMT1-204ENST00000460828 NCKAP5LQ9HCH0 1330 aa27.76■■■□□ 2.03
PCMT1-204ENST00000460828 UBAP1LF5GYI3 381 aa27.76■■■□□ 2.03
PCMT1-204ENST00000460828 ZMYM3Q14202 1370 aa27.75■■■□□ 2.03
PCMT1-204ENST00000460828 ZNF335Q9H4Z2 1342 aaPredicted RBP27.75■■■□□ 2.03
PCMT1-204ENST00000460828 SPAG9O60271 1321 aaKnown RBP27.74■■■□□ 2.03
PCMT1-204ENST00000460828 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
PCMT1-204ENST00000460828 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
PCMT1-204ENST00000460828 PLA2R1Q13018 1463 aa27.7■■■□□ 2.02
PCMT1-204ENST00000460828 FYCO1Q9BQS8 1478 aa27.68■■■□□ 2.02
PCMT1-204ENST00000460828 PKD2Q13563 968 aa27.67■■■□□ 2.02
PCMT1-204ENST00000460828 PLXNC1O60486 1568 aa27.67■■■□□ 2.02
PCMT1-204ENST00000460828 INO80Q9ULG1 1556 aaPredicted RBP27.67■■■□□ 2.02
PCMT1-204ENST00000460828 A2MP01023 1474 aa27.65■■■□□ 2.02
PCMT1-204ENST00000460828 HNRNPMP52272 730 aaKnown RBP eCLIP27.65■■■□□ 2.02
PCMT1-204ENST00000460828 GPATCH8Q9UKJ3 1502 aaKnown RBP27.63■■■□□ 2.01
PCMT1-204ENST00000460828 TCOF1Q13428 1488 aaKnown RBP27.63■■■□□ 2.01
PCMT1-204ENST00000460828 PLEKHH2Q8IVE3 1493 aa27.63■■■□□ 2.01
PCMT1-204ENST00000460828 PTPRKQ15262 1439 aa27.62■■■□□ 2.01
PCMT1-204ENST00000460828 GGT6Q6P531 493 aa27.62■■■□□ 2.01
PCMT1-204ENST00000460828 PPP6R1Q9UPN7 881 aa27.62■■■□□ 2.01
PCMT1-204ENST00000460828 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
PCMT1-204ENST00000460828 ADGBQ8N7X0 1667 aa27.6■■■□□ 2.01
PCMT1-204ENST00000460828 CFDP1Q9UEE9 299 aaPredicted RBP27.57■■■□□ 2
PCMT1-204ENST00000460828 KIAA1107Q9UPP5 1409 aa27.57■■■□□ 2
PCMT1-204ENST00000460828 CCNB3Q8WWL7 1395 aa27.56■■■□□ 2
PCMT1-204ENST00000460828 POLR1AO95602 1720 aaPredicted RBP27.55■■■□□ 2
PCMT1-204ENST00000460828 A2ML1A8K2U0 1454 aa27.53■■■□□ 2
PCMT1-204ENST00000460828 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
PCMT1-204ENST00000460828 MED1Q15648 1581 aaPredicted RBP27.52■■■□□ 2
PCMT1-204ENST00000460828 PIP4K2BP78356 416 aa27.51■■□□□ 1.99
PCMT1-204ENST00000460828 CPS1P31327 1500 aa27.48■■□□□ 1.99
PCMT1-204ENST00000460828 MTUS2Q5JR59 1369 aa27.48■■□□□ 1.99
PCMT1-204ENST00000460828 HSPA1LP34931 641 aa27.46■■□□□ 1.99
PCMT1-204ENST00000460828 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
PCMT1-204ENST00000460828 TOM1O60784 492 aa27.45■■□□□ 1.98
PCMT1-204ENST00000460828 NEURL4Q96JN8 1562 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms