RNA–Protein interactions for RNA: ENST00000460828.5

PCMT1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-204ENST00000460828 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
PCMT1-204ENST00000460828 ABCC9O60706 1549 aa39.47■■■■□ 3.91
PCMT1-204ENST00000460828 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
PCMT1-204ENST00000460828 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
PCMT1-204ENST00000460828 RB1CC1Q8TDY2 1594 aa37.34■■■■□ 3.57
PCMT1-204ENST00000460828 NACADO15069 1562 aa36.9■■■■□ 3.5
PCMT1-204ENST00000460828 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
PCMT1-204ENST00000460828 PABPN1Q86U42 306 aaKnown RBP eCLIP36.61■■■■□ 3.45
PCMT1-204ENST00000460828 UNC13AQ9UPW8 1703 aa36.51■■■■□ 3.43
PCMT1-204ENST00000460828 BICRAQ9NZM4 1560 aa36.19■■■■□ 3.38
PCMT1-204ENST00000460828 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
PCMT1-204ENST00000460828 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
PCMT1-204ENST00000460828 CC2D2AQ9P2K1 1620 aa35.63■■■■□ 3.29
PCMT1-204ENST00000460828 CECR2Q9BXF3 1484 aa35.6■■■■□ 3.29
PCMT1-204ENST00000460828 ZCCHC6Q5VYS8 1495 aaKnown RBP35.55■■■■□ 3.28
PCMT1-204ENST00000460828 SCRIBQ14160 1630 aa35.49■■■■□ 3.27
PCMT1-204ENST00000460828 DCAF1Q9Y4B6 1507 aa35.47■■■■□ 3.27
PCMT1-204ENST00000460828 EIF4G1Q04637 1599 aaKnown RBP35.41■■■■□ 3.26
PCMT1-204ENST00000460828 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
PCMT1-204ENST00000460828 CUX2O14529 1486 aa34.24■■■■□ 3.07
PCMT1-204ENST00000460828 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
PCMT1-204ENST00000460828 NCAPD3P42695 1498 aa34■■■■□ 3.03
PCMT1-204ENST00000460828 ATAD2BQ9ULI0 1458 aa33.85■■■■□ 3.01
PCMT1-204ENST00000460828 SMARCA2P51531 1590 aa33.79■■■■□ 3
PCMT1-204ENST00000460828 HMGXB3Q12766 1538 aa33.78■■■■□ 3
PCMT1-204ENST00000460828 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
PCMT1-204ENST00000460828 NESP48681 1621 aa33.71■■■□□ 2.99
PCMT1-204ENST00000460828 BAZ1BQ9UIG0 1483 aaKnown RBP33.57■■■□□ 2.97
PCMT1-204ENST00000460828 THOC2Q8NI27 1593 aaKnown RBP33.53■■■□□ 2.96
PCMT1-204ENST00000460828 BAZ1AQ9NRL2 1556 aaPredicted RBP33.48■■■□□ 2.95
PCMT1-204ENST00000460828 LAMC3Q9Y6N6 1575 aa33.43■■■□□ 2.94
PCMT1-204ENST00000460828 KIF21AQ7Z4S6 1674 aa33.35■■■□□ 2.93
PCMT1-204ENST00000460828 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
PCMT1-204ENST00000460828 PDS5BQ9NTI5 1447 aa33.24■■■□□ 2.91
PCMT1-204ENST00000460828 TRIM41Q8WV44 630 aa33.17■■■□□ 2.9
PCMT1-204ENST00000460828 MROH2BQ7Z745 1585 aa33.14■■■□□ 2.9
PCMT1-204ENST00000460828 MRC2Q9UBG0 1479 aa33■■■□□ 2.87
PCMT1-204ENST00000460828 CADPSQ9ULU8 1353 aa32.96■■■□□ 2.87
PCMT1-204ENST00000460828 WDR62O43379 1518 aa32.92■■■□□ 2.86
PCMT1-204ENST00000460828 WIZO95785 1651 aa32.78■■■□□ 2.84
PCMT1-204ENST00000460828 CEP164Q9UPV0 1460 aa32.78■■■□□ 2.84
PCMT1-204ENST00000460828 FANCD2Q9BXW9 1451 aa32.66■■■□□ 2.82
PCMT1-204ENST00000460828 OSCARQ8IYS5 282 aa32.53■■■□□ 2.8
PCMT1-204ENST00000460828 CFTRP13569 1480 aa32.47■■■□□ 2.79
PCMT1-204ENST00000460828 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.78
PCMT1-204ENST00000460828 TOP2AP11388 1531 aaKnown RBP32.32■■■□□ 2.76
PCMT1-204ENST00000460828 RIMBP3CA6NJZ7 1639 aa32.26■■■□□ 2.76
PCMT1-204ENST00000460828 RIMBP3BA6NNM3 1639 aa32.26■■■□□ 2.76
PCMT1-204ENST00000460828 RIMBP3Q9UFD9 1639 aa32.26■■■□□ 2.76
PCMT1-204ENST00000460828 PRDM2Q13029 1718 aa32.26■■■□□ 2.75
PCMT1-204ENST00000460828 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
PCMT1-204ENST00000460828 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
PCMT1-204ENST00000460828 ZNF608Q9ULD9 1512 aaPredicted RBP32.09■■■□□ 2.73
PCMT1-204ENST00000460828 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
PCMT1-204ENST00000460828 EIF4G3O43432 1585 aaKnown RBP31.97■■■□□ 2.71
PCMT1-204ENST00000460828 TOPBP1Q92547 1522 aa31.95■■■□□ 2.71
PCMT1-204ENST00000460828 CCDC88BA6NC98 1476 aa31.9■■■□□ 2.7
PCMT1-204ENST00000460828 CHD1O14646 1710 aa31.86■■■□□ 2.69
PCMT1-204ENST00000460828 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
PCMT1-204ENST00000460828 CYB5RLQ6IPT4 315 aa31.84■■■□□ 2.69
PCMT1-204ENST00000460828 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
PCMT1-204ENST00000460828 TRHP20396 242 aaPredicted RBP31.76■■■□□ 2.67
PCMT1-204ENST00000460828 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.671e-7■■■■■ 30.9
PCMT1-204ENST00000460828 ARAP1Q96P48 1450 aa31.71■■■□□ 2.67
PCMT1-204ENST00000460828 TARBP1Q13395 1621 aaKnown RBP31.71■■■□□ 2.67
PCMT1-204ENST00000460828 FBLN2P98095 1184 aa31.7■■■□□ 2.67
PCMT1-204ENST00000460828 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
PCMT1-204ENST00000460828 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
PCMT1-204ENST00000460828 SNAPC4Q5SXM2 1469 aa31.45■■■□□ 2.62
PCMT1-204ENST00000460828 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
PCMT1-204ENST00000460828 SOGA1O94964 1423 aa31.42■■■□□ 2.62
PCMT1-204ENST00000460828 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.62
PCMT1-204ENST00000460828 SYNJ1O43426 1573 aa31.39■■■□□ 2.62
PCMT1-204ENST00000460828 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
PCMT1-204ENST00000460828 FGD5Q6ZNL6 1462 aa31.34■■■□□ 2.61
PCMT1-204ENST00000460828 CHMP7Q8WUX9 453 aaPredicted RBP31.34■■■□□ 2.61
PCMT1-204ENST00000460828 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
PCMT1-204ENST00000460828 AEBP2Q6ZN18 517 aaPredicted RBP31.29■■■□□ 2.6
PCMT1-204ENST00000460828 GRIN2BQ13224 1484 aa31.25■■■□□ 2.59
PCMT1-204ENST00000460828 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
PCMT1-204ENST00000460828 CUX1P39880 1505 aa31.19■■■□□ 2.58
PCMT1-204ENST00000460828 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
PCMT1-204ENST00000460828 GAPVD1Q14C86 1478 aa31.11■■■□□ 2.57
PCMT1-204ENST00000460828 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
PCMT1-204ENST00000460828 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
PCMT1-204ENST00000460828 ERCC6L2Q5T890 1561 aa30.86■■■□□ 2.53
PCMT1-204ENST00000460828 GRIN2AQ12879 1464 aa30.85■■■□□ 2.53
PCMT1-204ENST00000460828 ADAMTS12P58397 1594 aa30.8■■■□□ 2.52
PCMT1-204ENST00000460828 CEP170Q5SW79 1584 aa30.79■■■□□ 2.52
PCMT1-204ENST00000460828 NUP160Q12769 1436 aa30.72■■■□□ 2.51
PCMT1-204ENST00000460828 WRNQ14191 1432 aaPredicted RBP eCLIP30.7■■■□□ 2.5
PCMT1-204ENST00000460828 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
PCMT1-204ENST00000460828 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
PCMT1-204ENST00000460828 FHAD1B1AJZ9 1412 aa30.63■■■□□ 2.49
PCMT1-204ENST00000460828 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
PCMT1-204ENST00000460828 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
PCMT1-204ENST00000460828 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
PCMT1-204ENST00000460828 PRG4Q92954 1404 aaPredicted RBP30.51■■■□□ 2.47
PCMT1-204ENST00000460828 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
PCMT1-204ENST00000460828 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms