RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
CDK11A-209ENST00000460465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.71■■□□□ 1.71
CDK11A-209ENST00000460465 NAIPQ13075 1403 aa25.7■■□□□ 1.7
CDK11A-209ENST00000460465 ABCC5O15440 1437 aa25.69■■□□□ 1.7
CDK11A-209ENST00000460465 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
CDK11A-209ENST00000460465 ZNF777Q9ULD5 760 aaPredicted RBP25.68■■□□□ 1.7
CDK11A-209ENST00000460465 CROCC2H7BZ55 1655 aa25.67■■□□□ 1.7
CDK11A-209ENST00000460465 AKNAQ7Z591 1439 aa25.67■■□□□ 1.7
CDK11A-209ENST00000460465 MYO5CQ9NQX4 1742 aa25.67■■□□□ 1.7
CDK11A-209ENST00000460465 CLSPNQ9HAW4 1339 aa25.66■■□□□ 1.7
CDK11A-209ENST00000460465 RRP7BPQ9NSQ0 103 aa25.62■■□□□ 1.69
CDK11A-209ENST00000460465 ADGBQ8N7X0 1667 aa25.62■■□□□ 1.69
CDK11A-209ENST00000460465 KCNH8Q96L42 1107 aa25.62■■□□□ 1.69
CDK11A-209ENST00000460465 SAMD9LQ8IVG5 1584 aa25.61■■□□□ 1.69
CDK11A-209ENST00000460465 ROCK1Q13464 1354 aa25.59■■□□□ 1.69
CDK11A-209ENST00000460465 MAPKBP1O60336 1514 aa25.59■■□□□ 1.69
CDK11A-209ENST00000460465 WDR7Q9Y4E6 1490 aa25.58■■□□□ 1.69
CDK11A-209ENST00000460465 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.69
CDK11A-209ENST00000460465 KDM6BO15054 1643 aa25.57■■□□□ 1.68
CDK11A-209ENST00000460465 ARHGEF5Q12774 1597 aa25.55■■□□□ 1.68
CDK11A-209ENST00000460465 ADGRL2O95490 1459 aa25.52■■□□□ 1.68
CDK11A-209ENST00000460465 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
CDK11A-209ENST00000460465 SHANK2Q9UPX8 1470 aa25.51■■□□□ 1.67
CDK11A-209ENST00000460465 MBD5Q9P267 1494 aa25.5■■□□□ 1.67
CDK11A-209ENST00000460465 PLCH2O75038 1416 aa25.49■■□□□ 1.67
CDK11A-209ENST00000460465 RIMBP3CA6NJZ7 1639 aa25.49■■□□□ 1.67
CDK11A-209ENST00000460465 RIMBP3BA6NNM3 1639 aa25.49■■□□□ 1.67
CDK11A-209ENST00000460465 RIMBP3Q9UFD9 1639 aa25.49■■□□□ 1.67
CDK11A-209ENST00000460465 SYCP2Q9BX26 1530 aa25.48■■□□□ 1.67
CDK11A-209ENST00000460465 HNRNPMP52272 730 aaKnown RBP eCLIP25.47■■□□□ 1.67
CDK11A-209ENST00000460465 ABCA9Q8IUA7 1624 aa25.47■■□□□ 1.67
CDK11A-209ENST00000460465 NCOA1Q15788 1441 aa25.47■■□□□ 1.67
CDK11A-209ENST00000460465 NPM1P06748 294 aaKnown RBP eCLIP25.46■■□□□ 1.67
CDK11A-209ENST00000460465 C9orf84Q5VXU9 1444 aa25.46■■□□□ 1.67
CDK11A-209ENST00000460465 CCDC141Q6ZP82 1450 aa25.46■■□□□ 1.67
CDK11A-209ENST00000460465 PLEKHH2Q8IVE3 1493 aa25.44■■□□□ 1.66
CDK11A-209ENST00000460465 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
CDK11A-209ENST00000460465 ARAP3Q8WWN8 1544 aa25.43■■□□□ 1.66
CDK11A-209ENST00000460465 KIAA1107Q9UPP5 1409 aa25.41■■□□□ 1.66
CDK11A-209ENST00000460465 TSPY4P0CV99 314 aa25.4■■□□□ 1.66
CDK11A-209ENST00000460465 TSPY10P0CW01 314 aa25.4■■□□□ 1.66
CDK11A-209ENST00000460465 ABCC1P33527 1531 aa25.39■■□□□ 1.66
CDK11A-209ENST00000460465 RSPH4AQ5TD94 716 aa25.38■■□□□ 1.65
CDK11A-209ENST00000460465 EFCAB2Q5VUJ9 269 aa25.38■■□□□ 1.65
CDK11A-209ENST00000460465 MAST1Q9Y2H9 1570 aa25.38■■□□□ 1.65
CDK11A-209ENST00000460465 TRIM52Q96A61 297 aa25.37■■□□□ 1.65
CDK11A-209ENST00000460465 ARHGEF12Q9NZN5 1544 aa25.37■■□□□ 1.65
CDK11A-209ENST00000460465 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
CDK11A-209ENST00000460465 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.65
CDK11A-209ENST00000460465 DENND4BO75064 1496 aaPredicted RBP25.32■■□□□ 1.64
CDK11A-209ENST00000460465 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
CDK11A-209ENST00000460465 ANKRD50Q9ULJ7 1429 aa25.31■■□□□ 1.64
CDK11A-209ENST00000460465 FANCAO15360 1455 aa25.3■■□□□ 1.64
CDK11A-209ENST00000460465 KIF15Q9NS87 1388 aa25.3■■□□□ 1.64
CDK11A-209ENST00000460465 PLXNC1O60486 1568 aa25.28■■□□□ 1.64
CDK11A-209ENST00000460465 NEUROD1Q13562 356 aa25.26■■□□□ 1.63
CDK11A-209ENST00000460465 MPHOSPH9Q99550 1183 aa25.26■■□□□ 1.63
CDK11A-209ENST00000460465 TRAPPC8Q9Y2L5 1435 aa25.26■■□□□ 1.63
CDK11A-209ENST00000460465 PZPP20742 1482 aa25.22■■□□□ 1.63
CDK11A-209ENST00000460465 CD109Q6YHK3 1445 aa25.21■■□□□ 1.63
CDK11A-209ENST00000460465 CFAP74Q9C0B2 1584 aa25.2■■□□□ 1.62
CDK11A-209ENST00000460465 ADGRL1O94910 1474 aa25.2■■□□□ 1.62
CDK11A-209ENST00000460465 SLC4A1APQ9BWU0 796 aaKnown RBP25.17■■□□□ 1.62
CDK11A-209ENST00000460465 ZFYVE16Q7Z3T8 1539 aa25.16■■□□□ 1.62
CDK11A-209ENST00000460465 KDM5DQ9BY66 1539 aa25.16■■□□□ 1.62
CDK11A-209ENST00000460465 TIMELESSQ9UNS1 1208 aa25.15■■□□□ 1.62
CDK11A-209ENST00000460465 DUOX2Q9NRD8 1548 aa25.15■■□□□ 1.62
CDK11A-209ENST00000460465 SCAPERQ9BY12 1400 aa25.15■■□□□ 1.62
CDK11A-209ENST00000460465 FOXD1Q16676 465 aa25.14■■□□□ 1.61
CDK11A-209ENST00000460465 AFAP1Q8N556 730 aa25.14■■□□□ 1.61
CDK11A-209ENST00000460465 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.61
CDK11A-209ENST00000460465 MAP3K4Q9Y6R4 1608 aa25.13■■□□□ 1.61
CDK11A-209ENST00000460465 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
CDK11A-209ENST00000460465 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
CDK11A-209ENST00000460465 UNC13BO14795 1591 aa25.12■■□□□ 1.61
CDK11A-209ENST00000460465 NUP155O75694 1391 aa25.11■■□□□ 1.61
CDK11A-209ENST00000460465 ZNF316A6NFI3 1004 aaPredicted RBP25.11■■□□□ 1.61
CDK11A-209ENST00000460465 TONSLQ96HA7 1378 aa25.1■■□□□ 1.61
CDK11A-209ENST00000460465 GLI2P10070 1586 aa25.1■■□□□ 1.61
CDK11A-209ENST00000460465 ATP7AQ04656 1500 aa25.1■■□□□ 1.61
CDK11A-209ENST00000460465 ANKRD30BQ9BXX2 1392 aa25.09■■□□□ 1.61
CDK11A-209ENST00000460465 ERBINQ96RT1 1412 aa25.09■■□□□ 1.61
CDK11A-209ENST00000460465 DIP2BQ9P265 1576 aa25.06■■□□□ 1.6
CDK11A-209ENST00000460465 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
CDK11A-209ENST00000460465 NEO1Q92859 1461 aa25.04■■□□□ 1.6
CDK11A-209ENST00000460465 FAM135AQ9P2D6 1515 aa25.04■■□□□ 1.6
CDK11A-209ENST00000460465 PKD2Q13563 968 aa25.03■■□□□ 1.6
CDK11A-209ENST00000460465 KIDINS220Q9ULH0 1771 aa25.03■■□□□ 1.6
CDK11A-209ENST00000460465 PPP1R15AO75807 674 aaPredicted RBP25.02■■□□□ 1.6
CDK11A-209ENST00000460465 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
CDK11A-209ENST00000460465 POGZQ7Z3K3 1410 aa25.01■■□□□ 1.59
CDK11A-209ENST00000460465 KDM5CP41229 1560 aa25.01■■□□□ 1.59
CDK11A-209ENST00000460465 RPRD2Q5VT52 1461 aaKnown RBP25.01■■□□□ 1.59
CDK11A-209ENST00000460465 MAGI2Q86UL8 1455 aa25■■□□□ 1.59
CDK11A-209ENST00000460465 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
CDK11A-209ENST00000460465 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.58
CDK11A-209ENST00000460465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.95■■□□□ 1.582e-6■■■■□ 19.5
CDK11A-209ENST00000460465 HECW2Q9P2P5 1572 aa24.95■■□□□ 1.58
CDK11A-209ENST00000460465 TSPOAP1O95153 1857 aa24.94■■□□□ 1.58
CDK11A-209ENST00000460465 DEPDC5O75140 1603 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms