RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PKD2Q13563 968 aa13.25□□□□□ -0.29
NUDCD3-203ENST00000460110 PPP1R15AO75807 674 aaPredicted RBP13.25□□□□□ -0.29
NUDCD3-203ENST00000460110 NAIPQ13075 1403 aa13.25□□□□□ -0.29
NUDCD3-203ENST00000460110 RGL3Q3MIN7 710 aa13.25□□□□□ -0.29
NUDCD3-203ENST00000460110 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
NUDCD3-203ENST00000460110 ATP10BO94823 1461 aa13.23□□□□□ -0.29
NUDCD3-203ENST00000460110 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
NUDCD3-203ENST00000460110 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
NUDCD3-203ENST00000460110 HFM1A2PYH4 1435 aa13.21□□□□□ -0.29
NUDCD3-203ENST00000460110 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.29
NUDCD3-203ENST00000460110 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
NUDCD3-203ENST00000460110 NUP155O75694 1391 aa13.21□□□□□ -0.3
NUDCD3-203ENST00000460110 UACAQ9BZF9 1416 aa13.2□□□□□ -0.3
NUDCD3-203ENST00000460110 ANKRD30AQ9BXX3 1397 aa13.19□□□□□ -0.3
NUDCD3-203ENST00000460110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.3
NUDCD3-203ENST00000460110 MIA2Q96PC5 1412 aa13.19□□□□□ -0.3
NUDCD3-203ENST00000460110 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
NUDCD3-203ENST00000460110 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-203ENST00000460110 ABCC5O15440 1437 aa13.18□□□□□ -0.3
NUDCD3-203ENST00000460110 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
NUDCD3-203ENST00000460110 DAPK1P53355 1430 aa13.18□□□□□ -0.3
NUDCD3-203ENST00000460110 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-203ENST00000460110 MAPKBP1O60336 1514 aa13.15□□□□□ -0.3
NUDCD3-203ENST00000460110 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
NUDCD3-203ENST00000460110 LRRIQ1Q96JM4 1722 aa13.15□□□□□ -0.3
NUDCD3-203ENST00000460110 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-203ENST00000460110 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
NUDCD3-203ENST00000460110 ANP32CO43423 234 aa13.12□□□□□ -0.31
NUDCD3-203ENST00000460110 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUDCD3-203ENST00000460110 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
NUDCD3-203ENST00000460110 KIF15Q9NS87 1388 aa13.12□□□□□ -0.31
NUDCD3-203ENST00000460110 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-203ENST00000460110 DCAF11Q8TEB1 546 aa13.12□□□□□ -0.31
NUDCD3-203ENST00000460110 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-203ENST00000460110 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
NUDCD3-203ENST00000460110 ANKRD50Q9ULJ7 1429 aa13.11□□□□□ -0.31
NUDCD3-203ENST00000460110 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-203ENST00000460110 KIF14Q15058 1648 aa13.11□□□□□ -0.31
NUDCD3-203ENST00000460110 CHD1O14646 1710 aa13.11□□□□□ -0.31
NUDCD3-203ENST00000460110 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-203ENST00000460110 ARHGAP5Q13017 1502 aa13.09□□□□□ -0.31
NUDCD3-203ENST00000460110 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
NUDCD3-203ENST00000460110 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
NUDCD3-203ENST00000460110 KIF3BO15066 747 aa13.08□□□□□ -0.32
NUDCD3-203ENST00000460110 GGT6Q6P531 493 aa13.06□□□□□ -0.32
NUDCD3-203ENST00000460110 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
NUDCD3-203ENST00000460110 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
NUDCD3-203ENST00000460110 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
NUDCD3-203ENST00000460110 TCOF1Q13428 1488 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-203ENST00000460110 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
NUDCD3-203ENST00000460110 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
NUDCD3-203ENST00000460110 KDM6BO15054 1643 aa13.03□□□□□ -0.32
NUDCD3-203ENST00000460110 ABCA8O94911 1581 aa13.02□□□□□ -0.33
NUDCD3-203ENST00000460110 ROCK1Q13464 1354 aa13.02□□□□□ -0.33
NUDCD3-203ENST00000460110 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
NUDCD3-203ENST00000460110 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
NUDCD3-203ENST00000460110 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
NUDCD3-203ENST00000460110 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
NUDCD3-203ENST00000460110 MLECQ14165 292 aa12.97□□□□□ -0.33
NUDCD3-203ENST00000460110 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
NUDCD3-203ENST00000460110 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
NUDCD3-203ENST00000460110 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
NUDCD3-203ENST00000460110 FAM69CQ0P6D2 419 aa12.96□□□□□ -0.34
NUDCD3-203ENST00000460110 CCDC141Q6ZP82 1450 aa12.95□□□□□ -0.34
NUDCD3-203ENST00000460110 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
NUDCD3-203ENST00000460110 PLEKHH2Q8IVE3 1493 aa12.94□□□□□ -0.34
NUDCD3-203ENST00000460110 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
NUDCD3-203ENST00000460110 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-203ENST00000460110 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-203ENST00000460110 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
NUDCD3-203ENST00000460110 DNMT1P26358 1616 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-203ENST00000460110 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
NUDCD3-203ENST00000460110 ASXL2Q76L83 1435 aa12.92□□□□□ -0.34
NUDCD3-203ENST00000460110 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
NUDCD3-203ENST00000460110 BCANQ96GW7 911 aa12.92□□□□□ -0.34
NUDCD3-203ENST00000460110 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
NUDCD3-203ENST00000460110 PLCH2O75038 1416 aa12.91□□□□□ -0.34
NUDCD3-203ENST00000460110 HNRNPUQ00839 825 aaKnown RBP eCLIP12.91□□□□□ -0.34
NUDCD3-203ENST00000460110 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
NUDCD3-203ENST00000460110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.9□□□□□ -0.34
NUDCD3-203ENST00000460110 MRS2Q9HD23 443 aa12.9□□□□□ -0.34
NUDCD3-203ENST00000460110 ITSN2Q9NZM3 1697 aa12.9□□□□□ -0.34
NUDCD3-203ENST00000460110 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
NUDCD3-203ENST00000460110 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-203ENST00000460110 TTC37Q6PGP7 1564 aa12.88□□□□□ -0.35
NUDCD3-203ENST00000460110 FANCAO15360 1455 aa12.88□□□□□ -0.35
NUDCD3-203ENST00000460110 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-203ENST00000460110 PZPP20742 1482 aa12.88□□□□□ -0.35
NUDCD3-203ENST00000460110 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
NUDCD3-203ENST00000460110 KANK1Q14678 1352 aa12.87□□□□□ -0.35
NUDCD3-203ENST00000460110 CD109Q6YHK3 1445 aa12.87□□□□□ -0.35
NUDCD3-203ENST00000460110 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-203ENST00000460110 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
NUDCD3-203ENST00000460110 USP47Q96K76 1375 aa12.86□□□□□ -0.35
NUDCD3-203ENST00000460110 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
NUDCD3-203ENST00000460110 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-203ENST00000460110 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
NUDCD3-203ENST00000460110 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
NUDCD3-203ENST00000460110 KIF7Q2M1P5 1343 aa12.85□□□□□ -0.35
NUDCD3-203ENST00000460110 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms