RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
CENPA-204ENST00000460030 POGZQ7Z3K3 1410 aa29.61■■■□□ 2.33
CENPA-204ENST00000460030 ARHGAP5Q13017 1502 aa29.61■■■□□ 2.33
CENPA-204ENST00000460030 ZMYM4Q5VZL5 1548 aa29.61■■■□□ 2.33
CENPA-204ENST00000460030 ARID4BQ4LE39 1312 aaPredicted RBP29.59■■■□□ 2.33
CENPA-204ENST00000460030 YEATS2Q9ULM3 1422 aa29.59■■■□□ 2.33
CENPA-204ENST00000460030 ZFYVE16Q7Z3T8 1539 aa29.56■■■□□ 2.32
CENPA-204ENST00000460030 MTUS2Q5JR59 1369 aa29.56■■■□□ 2.32
CENPA-204ENST00000460030 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
CENPA-204ENST00000460030 ADAMTSL3P82987 1691 aa29.53■■■□□ 2.32
CENPA-204ENST00000460030 BCORL1Q5H9F3 1711 aa29.51■■■□□ 2.32
CENPA-204ENST00000460030 CDC42BPBQ9Y5S2 1711 aa29.51■■■□□ 2.32
CENPA-204ENST00000460030 TIAM1Q13009 1591 aa29.51■■■□□ 2.31
CENPA-204ENST00000460030 PREX2Q70Z35 1606 aa29.5■■■□□ 2.31
CENPA-204ENST00000460030 MAGI2Q86UL8 1455 aa29.49■■■□□ 2.31
CENPA-204ENST00000460030 APLP2Q06481 763 aa29.49■■■□□ 2.31
CENPA-204ENST00000460030 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
CENPA-204ENST00000460030 EHBP1L1Q8N3D4 1523 aa29.46■■■□□ 2.31
CENPA-204ENST00000460030 MADDQ8WXG6 1647 aa29.46■■■□□ 2.31
CENPA-204ENST00000460030 PTPRMP28827 1452 aa29.46■■■□□ 2.31
CENPA-204ENST00000460030 HECW2Q9P2P5 1572 aa29.46■■■□□ 2.31
CENPA-204ENST00000460030 ZNF518AQ6AHZ1 1483 aa29.45■■■□□ 2.31
CENPA-204ENST00000460030 AFAP1Q8N556 730 aa29.45■■■□□ 2.31
CENPA-204ENST00000460030 LRRC9Q6ZRR7 1453 aa29.43■■■□□ 2.3
CENPA-204ENST00000460030 CDC42BPAQ5VT25 1732 aa29.42■■■□□ 2.3
CENPA-204ENST00000460030 ABCC1P33527 1531 aa29.41■■■□□ 2.3
CENPA-204ENST00000460030 ARHGEF12Q9NZN5 1544 aa29.4■■■□□ 2.3
CENPA-204ENST00000460030 KDM5CP41229 1560 aa29.4■■■□□ 2.3
CENPA-204ENST00000460030 KANK4Q5T7N3 995 aaPredicted RBP29.39■■■□□ 2.3
CENPA-204ENST00000460030 TRAPPC8Q9Y2L5 1435 aa29.38■■■□□ 2.29
CENPA-204ENST00000460030 MLECQ14165 292 aa29.38■■■□□ 2.29
CENPA-204ENST00000460030 ATP10AO60312 1499 aa29.37■■■□□ 2.29
CENPA-204ENST00000460030 GPATCH8Q9UKJ3 1502 aaKnown RBP29.37■■■□□ 2.29
CENPA-204ENST00000460030 MYT1LQ9UL68 1186 aa29.37■■■□□ 2.29
CENPA-204ENST00000460030 ZNF777Q9ULD5 760 aaPredicted RBP29.37■■■□□ 2.29
CENPA-204ENST00000460030 RIMS1Q86UR5 1692 aaKnown RBP29.37■■■□□ 2.29
CENPA-204ENST00000460030 C9orf84Q5VXU9 1444 aa29.36■■■□□ 2.29
CENPA-204ENST00000460030 ITSN2Q9NZM3 1697 aa29.35■■■□□ 2.29
CENPA-204ENST00000460030 CCNB3Q8WWL7 1395 aa29.34■■■□□ 2.29
CENPA-204ENST00000460030 SAMD9LQ8IVG5 1584 aa29.32■■■□□ 2.28
CENPA-204ENST00000460030 NCOA2Q15596 1464 aa29.31■■■□□ 2.28
CENPA-204ENST00000460030 DIP2CQ9Y2E4 1556 aa29.3■■■□□ 2.28
CENPA-204ENST00000460030 PLPPR3Q6T4P5 718 aa29.29■■■□□ 2.28
CENPA-204ENST00000460030 SYCP2Q9BX26 1530 aa29.29■■■□□ 2.28
CENPA-204ENST00000460030 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
CENPA-204ENST00000460030 ABCA6Q8N139 1617 aa29.28■■■□□ 2.28
CENPA-204ENST00000460030 MLH3Q9UHC1 1453 aa29.28■■■□□ 2.28
CENPA-204ENST00000460030 CFDP1Q9UEE9 299 aaPredicted RBP29.27■■■□□ 2.28
CENPA-204ENST00000460030 HNRNPMP52272 730 aaKnown RBP eCLIP29.24■■■□□ 2.27
CENPA-204ENST00000460030 FER1L4A9Z1Z3 1794 aa29.23■■■□□ 2.27
CENPA-204ENST00000460030 KIDINS220Q9ULH0 1771 aa29.2■■■□□ 2.26
CENPA-204ENST00000460030 REREQ9P2R6 1566 aa29.18■■■□□ 2.26
CENPA-204ENST00000460030 ZNF644Q9H582 1327 aaPredicted RBP29.17■■■□□ 2.26
CENPA-204ENST00000460030 PLEKHH2Q8IVE3 1493 aa29.16■■■□□ 2.26
CENPA-204ENST00000460030 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
CENPA-204ENST00000460030 LMTK3Q96Q04 1460 aa29.15■■■□□ 2.26
CENPA-204ENST00000460030 SPAG9O60271 1321 aaKnown RBP29.15■■■□□ 2.26
CENPA-204ENST00000460030 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
CENPA-204ENST00000460030 MIA2Q96PC5 1412 aa29.1■■■□□ 2.25
CENPA-204ENST00000460030 AGLP35573 1532 aa29.1■■■□□ 2.25
CENPA-204ENST00000460030 ATP7AQ04656 1500 aa29.1■■■□□ 2.25
CENPA-204ENST00000460030 CEBPAP49715 358 aaPredicted RBP29.09■■■□□ 2.25
CENPA-204ENST00000460030 INO80Q9ULG1 1556 aaPredicted RBP29.08■■■□□ 2.25
CENPA-204ENST00000460030 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
CENPA-204ENST00000460030 HSPA2P54652 639 aa29.03■■■□□ 2.24
CENPA-204ENST00000460030 CAMSAP2Q08AD1 1489 aa29.01■■■□□ 2.23
CENPA-204ENST00000460030 RSPH4AQ5TD94 716 aa29■■■□□ 2.23
CENPA-204ENST00000460030 A2MP01023 1474 aa28.98■■■□□ 2.23
CENPA-204ENST00000460030 PPARGC1BQ86YN6 1023 aaKnown RBP28.98■■■□□ 2.23
CENPA-204ENST00000460030 FGD6Q6ZV73 1430 aa28.97■■■□□ 2.23
CENPA-204ENST00000460030 PLXNC1O60486 1568 aa28.96■■■□□ 2.23
CENPA-204ENST00000460030 ESF1Q9H501 851 aaKnown RBP28.96■■■□□ 2.23
CENPA-204ENST00000460030 CCDC141Q6ZP82 1450 aa28.93■■■□□ 2.22
CENPA-204ENST00000460030 C3P01024 1663 aa28.93■■■□□ 2.22
CENPA-204ENST00000460030 PREX1Q8TCU6 1659 aa28.9■■■□□ 2.22
CENPA-204ENST00000460030 TCOF1Q13428 1488 aaKnown RBP28.9■■■□□ 2.22
CENPA-204ENST00000460030 RTEL1-TNFRSF6BF6WH68 1400 aa28.89■■■□□ 2.22
CENPA-204ENST00000460030 ADGBQ8N7X0 1667 aa28.89■■■□□ 2.21
CENPA-204ENST00000460030 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
CENPA-204ENST00000460030 ARHGEF5Q12774 1597 aa28.88■■■□□ 2.21
CENPA-204ENST00000460030 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
CENPA-204ENST00000460030 GGT6Q6P531 493 aa28.86■■■□□ 2.21
CENPA-204ENST00000460030 ILDR1Q86SU0 546 aaPredicted RBP28.86■■■□□ 2.21
CENPA-204ENST00000460030 TSPY4P0CV99 314 aa28.85■■■□□ 2.21
CENPA-204ENST00000460030 TSPY10P0CW01 314 aa28.85■■■□□ 2.21
CENPA-204ENST00000460030 UHRF1BP1Q6BDS2 1440 aa28.85■■■□□ 2.21
CENPA-204ENST00000460030 CLTCQ00610 1675 aaKnown RBP28.81■■■□□ 2.2
CENPA-204ENST00000460030 DHX29Q7Z478 1369 aaKnown RBP28.81■■■□□ 2.2
CENPA-204ENST00000460030 ZMYM3Q14202 1370 aa28.8■■■□□ 2.2
CENPA-204ENST00000460030 MROH2AA6NES4 1674 aa28.8■■■□□ 2.2
CENPA-204ENST00000460030 FAM50AQ14320 339 aaKnown RBP28.79■■■□□ 2.2
CENPA-204ENST00000460030 ABCC5O15440 1437 aa28.77■■■□□ 2.2
CENPA-204ENST00000460030 SETD1BQ9UPS6 1966 aaKnown RBP28.75■■■□□ 2.19
CENPA-204ENST00000460030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
CENPA-204ENST00000460030 KIF3BO15066 747 aa28.73■■■□□ 2.19
CENPA-204ENST00000460030 DAPK1P53355 1430 aa28.73■■■□□ 2.19
CENPA-204ENST00000460030 MAST1Q9Y2H9 1570 aa28.71■■■□□ 2.19
CENPA-204ENST00000460030 NPATQ14207 1427 aa28.71■■■□□ 2.19
CENPA-204ENST00000460030 RRBP1Q9P2E9 1410 aaKnown RBP28.71■■■□□ 2.19
CENPA-204ENST00000460030 SHANK2Q9UPX8 1470 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms