RNA–Protein interactions for RNA: ENST00000457805.6

PTP4A2-201, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2 BASIC

Gene PTP4A2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-201ENST00000457805 WIZO95785 1651 aa15.49■□□□□ 0.07
PTP4A2-201ENST00000457805 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
PTP4A2-201ENST00000457805 PDAP1Q13442 181 aaKnown RBP15.45■□□□□ 0.06
PTP4A2-201ENST00000457805 BOLA1Q9Y3E2 137 aa15.45■□□□□ 0.06
PTP4A2-201ENST00000457805 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
PTP4A2-201ENST00000457805 HOXB1P14653 301 aaPredicted RBP15.43■□□□□ 0.06
PTP4A2-201ENST00000457805 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
PTP4A2-201ENST00000457805 CABP2Q9NPB3 220 aa15.4■□□□□ 0.06
PTP4A2-201ENST00000457805 G3V3G9 751 aa15.38■□□□□ 0.05
PTP4A2-201ENST00000457805 ZNF710Q8N1W2 664 aa15.37■□□□□ 0.05
PTP4A2-201ENST00000457805 ERBB3P21860 1342 aa15.35■□□□□ 0.05
PTP4A2-201ENST00000457805 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
PTP4A2-201ENST00000457805 LAMC3Q9Y6N6 1575 aa15.33■□□□□ 0.05
PTP4A2-201ENST00000457805 DOK7Q18PE1 504 aa15.33■□□□□ 0.04
PTP4A2-201ENST00000457805 RNF166Q96A37 237 aaPredicted RBP15.31■□□□□ 0.04
PTP4A2-201ENST00000457805 CUX2O14529 1486 aa15.31■□□□□ 0.04
PTP4A2-201ENST00000457805 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
PTP4A2-201ENST00000457805 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.03
PTP4A2-201ENST00000457805 VARS2Q5ST30 1063 aaKnown RBP15.25■□□□□ 0.03
PTP4A2-201ENST00000457805 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
PTP4A2-201ENST00000457805 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
PTP4A2-201ENST00000457805 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
PTP4A2-201ENST00000457805 MYT1LQ9UL68 1186 aa15.21■□□□□ 0.03
PTP4A2-201ENST00000457805 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
PTP4A2-201ENST00000457805 SPOCK2Q92563 424 aa15.18■□□□□ 0.02
PTP4A2-201ENST00000457805 CFTRP13569 1480 aa15.18■□□□□ 0.02
PTP4A2-201ENST00000457805 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
PTP4A2-201ENST00000457805 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
PTP4A2-201ENST00000457805 TMEM92Q6UXU6 159 aa15.16■□□□□ 0.02
PTP4A2-201ENST00000457805 ZNF687Q8N1G0 1237 aa15.16■□□□□ 0.02
PTP4A2-201ENST00000457805 EFCAB3Q8N7B9 438 aa15.15■□□□□ 0.02
PTP4A2-201ENST00000457805 ZSWIM6Q9HCJ5 1215 aa15.14■□□□□ 0.01
PTP4A2-201ENST00000457805 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
PTP4A2-201ENST00000457805 IFNLR1Q8IU57 520 aaPredicted RBP15.13■□□□□ 0.01
PTP4A2-201ENST00000457805 MRC2Q9UBG0 1479 aa15.13■□□□□ 0.01
PTP4A2-201ENST00000457805 GPR153Q6NV75 609 aa15.11■□□□□ 0.01
PTP4A2-201ENST00000457805 MICALL2Q8IY33 904 aa15.11■□□□□ 0.01
PTP4A2-201ENST00000457805 CEP164Q9UPV0 1460 aa15.1■□□□□ 0.01
PTP4A2-201ENST00000457805 WDR62O43379 1518 aa15.06■□□□□ 0
PTP4A2-201ENST00000457805 PTGER2P43116 358 aa15.05■□□□□ -0
PTP4A2-201ENST00000457805 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
PTP4A2-201ENST00000457805 URB2Q14146 1524 aaKnown RBP15.01□□□□□ -0.01
PTP4A2-201ENST00000457805 MS4A4AQ96JQ5 239 aa14.98□□□□□ -0.01
PTP4A2-201ENST00000457805 ARSIQ5FYB1 569 aa14.97□□□□□ -0.01
PTP4A2-201ENST00000457805 PRDM2Q13029 1718 aa14.96□□□□□ -0.01
PTP4A2-201ENST00000457805 ANKRD13DQ6ZTN6 518 aa14.96□□□□□ -0.01
PTP4A2-201ENST00000457805 SOX12O15370 315 aa14.95□□□□□ -0.02
PTP4A2-201ENST00000457805 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
PTP4A2-201ENST00000457805 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
PTP4A2-201ENST00000457805 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTP4A2-201ENST00000457805 PHF8Q9UPP1 1060 aa14.89□□□□□ -0.03
PTP4A2-201ENST00000457805 LSM11P83369 360 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTP4A2-201ENST00000457805 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
PTP4A2-201ENST00000457805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
PTP4A2-201ENST00000457805 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
PTP4A2-201ENST00000457805 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
PTP4A2-201ENST00000457805 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
PTP4A2-201ENST00000457805 RNF25Q96BH1 459 aaPredicted RBP14.82□□□□□ -0.04
PTP4A2-201ENST00000457805 ZNF608Q9ULD9 1512 aaPredicted RBP14.81□□□□□ -0.04
PTP4A2-201ENST00000457805 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
PTP4A2-201ENST00000457805 IFT140Q96RY7 1462 aa14.8□□□□□ -0.04
PTP4A2-201ENST00000457805 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
PTP4A2-201ENST00000457805 POTEEQ6S8J3 1075 aa14.75□□□□□ -0.05
PTP4A2-201ENST00000457805 PBX2P40425 430 aa14.74□□□□□ -0.05
PTP4A2-201ENST00000457805 PLA2G2EQ9NZK7 142 aa14.74□□□□□ -0.05
PTP4A2-201ENST00000457805 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
PTP4A2-201ENST00000457805 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.056e-8■■■■□ 23.2
PTP4A2-201ENST00000457805 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
PTP4A2-201ENST00000457805 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
PTP4A2-201ENST00000457805 NUDT7P0C024 238 aa14.71□□□□□ -0.05
PTP4A2-201ENST00000457805 FBXO22Q8NEZ5 403 aa14.71□□□□□ -0.05
PTP4A2-201ENST00000457805 SOGA1O94964 1423 aa14.71□□□□□ -0.05
PTP4A2-201ENST00000457805 CUX1P39880 1505 aa14.71□□□□□ -0.06
PTP4A2-201ENST00000457805 KIF3CO14782 793 aa14.7□□□□□ -0.06
PTP4A2-201ENST00000457805 NLRP6P59044 892 aa14.7□□□□□ -0.06
PTP4A2-201ENST00000457805 AXIN2Q9Y2T1 843 aa14.69□□□□□ -0.06
PTP4A2-201ENST00000457805 TDRD9Q8NDG6 1382 aaKnown RBP14.68□□□□□ -0.06
PTP4A2-201ENST00000457805 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
PTP4A2-201ENST00000457805 HCSTQ9UBK5 93 aa14.67□□□□□ -0.06
PTP4A2-201ENST00000457805 LHX6Q9UPM6 363 aa14.67□□□□□ -0.06
PTP4A2-201ENST00000457805 EIF4G3O43432 1585 aaKnown RBP14.65□□□□□ -0.06
PTP4A2-201ENST00000457805 C2orf72A6NCS6 295 aa14.65□□□□□ -0.06
PTP4A2-201ENST00000457805 PCDHGA4Q9Y5G9 962 aa14.61□□□□□ -0.07
PTP4A2-201ENST00000457805 SLC34A2O95436 690 aa14.6□□□□□ -0.07
PTP4A2-201ENST00000457805 ADGRD1Q6QNK2 874 aa14.58□□□□□ -0.08
PTP4A2-201ENST00000457805 MFRPQ9BY79 579 aa14.58□□□□□ -0.08
PTP4A2-201ENST00000457805 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
PTP4A2-201ENST00000457805 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
PTP4A2-201ENST00000457805 ARHGAP33O14559 1287 aa14.53□□□□□ -0.08
PTP4A2-201ENST00000457805 CHD1O14646 1710 aa14.52□□□□□ -0.08
PTP4A2-201ENST00000457805 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
PTP4A2-201ENST00000457805 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
PTP4A2-201ENST00000457805 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
PTP4A2-201ENST00000457805 STK24Q9Y6E0 443 aa14.51□□□□□ -0.09
PTP4A2-201ENST00000457805 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
PTP4A2-201ENST00000457805 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
PTP4A2-201ENST00000457805 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
PTP4A2-201ENST00000457805 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
PTP4A2-201ENST00000457805 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
PTP4A2-201ENST00000457805 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms