RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
COMMD3-204ENST00000456711 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
COMMD3-204ENST00000456711 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
COMMD3-204ENST00000456711 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
COMMD3-204ENST00000456711 G3V3G9 751 aa13.47□□□□□ -0.25
COMMD3-204ENST00000456711 PDAP1Q13442 181 aaKnown RBP13.47□□□□□ -0.25
COMMD3-204ENST00000456711 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
COMMD3-204ENST00000456711 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-204ENST00000456711 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
COMMD3-204ENST00000456711 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
COMMD3-204ENST00000456711 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
COMMD3-204ENST00000456711 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
COMMD3-204ENST00000456711 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
COMMD3-204ENST00000456711 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
COMMD3-204ENST00000456711 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
COMMD3-204ENST00000456711 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
COMMD3-204ENST00000456711 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
COMMD3-204ENST00000456711 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
COMMD3-204ENST00000456711 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
COMMD3-204ENST00000456711 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
COMMD3-204ENST00000456711 ATAD2BQ9ULI0 1458 aa13.33□□□□□ -0.28
COMMD3-204ENST00000456711 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
COMMD3-204ENST00000456711 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
COMMD3-204ENST00000456711 ZSWIM6Q9HCJ5 1215 aa13.29□□□□□ -0.28
COMMD3-204ENST00000456711 ANKRD13DQ6ZTN6 518 aa13.28□□□□□ -0.28
COMMD3-204ENST00000456711 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
COMMD3-204ENST00000456711 PTGER2P43116 358 aa13.27□□□□□ -0.29
COMMD3-204ENST00000456711 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
COMMD3-204ENST00000456711 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
COMMD3-204ENST00000456711 WDR62O43379 1518 aa13.23□□□□□ -0.29
COMMD3-204ENST00000456711 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
COMMD3-204ENST00000456711 ARSIQ5FYB1 569 aa13.22□□□□□ -0.29
COMMD3-204ENST00000456711 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-204ENST00000456711 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.291e-11■■□□□ 14
COMMD3-204ENST00000456711 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
COMMD3-204ENST00000456711 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
COMMD3-204ENST00000456711 BAZ1BQ9UIG0 1483 aaKnown RBP13.15□□□□□ -0.3
COMMD3-204ENST00000456711 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-204ENST00000456711 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
COMMD3-204ENST00000456711 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
COMMD3-204ENST00000456711 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
COMMD3-204ENST00000456711 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-204ENST00000456711 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
COMMD3-204ENST00000456711 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
COMMD3-204ENST00000456711 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
COMMD3-204ENST00000456711 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
COMMD3-204ENST00000456711 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
COMMD3-204ENST00000456711 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
COMMD3-204ENST00000456711 SOX12O15370 315 aa13□□□□□ -0.33
COMMD3-204ENST00000456711 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
COMMD3-204ENST00000456711 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
COMMD3-204ENST00000456711 NUDT7P0C024 238 aa12.98□□□□□ -0.33
COMMD3-204ENST00000456711 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
COMMD3-204ENST00000456711 PBX2P40425 430 aa12.96□□□□□ -0.33
COMMD3-204ENST00000456711 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
COMMD3-204ENST00000456711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.92□□□□□ -0.34
COMMD3-204ENST00000456711 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
COMMD3-204ENST00000456711 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
COMMD3-204ENST00000456711 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
COMMD3-204ENST00000456711 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
COMMD3-204ENST00000456711 KIF3CO14782 793 aa12.87□□□□□ -0.35
COMMD3-204ENST00000456711 ADGRD1Q6QNK2 874 aa12.87□□□□□ -0.35
COMMD3-204ENST00000456711 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
COMMD3-204ENST00000456711 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
COMMD3-204ENST00000456711 RIOK3O14730 519 aaKnown RBP12.85□□□□□ -0.35
COMMD3-204ENST00000456711 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
COMMD3-204ENST00000456711 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
COMMD3-204ENST00000456711 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
COMMD3-204ENST00000456711 CHD1O14646 1710 aa12.81□□□□□ -0.36
COMMD3-204ENST00000456711 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
COMMD3-204ENST00000456711 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
COMMD3-204ENST00000456711 HRO43593 1189 aa12.78□□□□□ -0.36
COMMD3-204ENST00000456711 NLRP6P59044 892 aa12.78□□□□□ -0.36
COMMD3-204ENST00000456711 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
COMMD3-204ENST00000456711 IFT140Q96RY7 1462 aa12.77□□□□□ -0.37
COMMD3-204ENST00000456711 SLC34A2O95436 690 aa12.76□□□□□ -0.37
COMMD3-204ENST00000456711 KCTD12Q96CX2 325 aaKnown RBP12.74□□□□□ -0.37
COMMD3-204ENST00000456711 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
COMMD3-204ENST00000456711 PSEN2P49810 448 aa12.73□□□□□ -0.37
COMMD3-204ENST00000456711 EIF4G3O43432 1585 aaKnown RBP12.73□□□□□ -0.37
COMMD3-204ENST00000456711 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
COMMD3-204ENST00000456711 CFTRP13569 1480 aa12.72□□□□□ -0.37
COMMD3-204ENST00000456711 TK2O00142 265 aa12.7□□□□□ -0.38
COMMD3-204ENST00000456711 KDM4FA0A1W2PPD8 638 aa12.68□□□□□ -0.38
COMMD3-204ENST00000456711 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
COMMD3-204ENST00000456711 CLASP1Q7Z460 1538 aa12.64□□□□□ -0.39
COMMD3-204ENST00000456711 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-204ENST00000456711 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
COMMD3-204ENST00000456711 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.396e-7■■■■□ 24.7
COMMD3-204ENST00000456711 PTPN5P54829 565 aa12.6□□□□□ -0.39
COMMD3-204ENST00000456711 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
COMMD3-204ENST00000456711 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
COMMD3-204ENST00000456711 RGS20O76081 388 aa12.57□□□□□ -0.4
COMMD3-204ENST00000456711 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
COMMD3-204ENST00000456711 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
COMMD3-204ENST00000456711 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
COMMD3-204ENST00000456711 WIZO95785 1651 aa12.54□□□□□ -0.4
COMMD3-204ENST00000456711 KIF13AQ9H1H9 1805 aa12.54□□□□□ -0.4
COMMD3-204ENST00000456711 FBXO41Q8TF61 875 aa12.54□□□□□ -0.4
COMMD3-204ENST00000456711 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms