RNA–Protein interactions for RNA: ENST00000456646.1

CFTRP1-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 1, humanhuman

BASIC

Gene CFTRP1, Length 183 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP1-201ENST00000456646 PPP1R37O75864 691 aa11.14□□□□□ -0.63
CFTRP1-201ENST00000456646 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
CFTRP1-201ENST00000456646 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
CFTRP1-201ENST00000456646 SNPHO15079 494 aa11.09□□□□□ -0.63
CFTRP1-201ENST00000456646 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
CFTRP1-201ENST00000456646 KIF3CO14782 793 aa11.04□□□□□ -0.64
CFTRP1-201ENST00000456646 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
CFTRP1-201ENST00000456646 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
CFTRP1-201ENST00000456646 C2orf72A6NCS6 295 aa10.98□□□□□ -0.65
CFTRP1-201ENST00000456646 DOK7Q18PE1 504 aa10.95□□□□□ -0.66
CFTRP1-201ENST00000456646 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
CFTRP1-201ENST00000456646 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
CFTRP1-201ENST00000456646 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
CFTRP1-201ENST00000456646 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
CFTRP1-201ENST00000456646 FOXK1P85037 733 aa10.89□□□□□ -0.67
CFTRP1-201ENST00000456646 CRISPLD2Q9H0B8 497 aa10.89□□□□□ -0.67
CFTRP1-201ENST00000456646 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
CFTRP1-201ENST00000456646 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
CFTRP1-201ENST00000456646 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
CFTRP1-201ENST00000456646 SLC34A2O95436 690 aa10.87□□□□□ -0.67
CFTRP1-201ENST00000456646 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
CFTRP1-201ENST00000456646 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
CFTRP1-201ENST00000456646 MARVELD3Q96A59 401 aa10.87□□□□□ -0.67
CFTRP1-201ENST00000456646 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
CFTRP1-201ENST00000456646 DSG2Q14126 1118 aa10.85□□□□□ -0.67
CFTRP1-201ENST00000456646 PDE4AP27815 886 aa10.83□□□□□ -0.68
CFTRP1-201ENST00000456646 EMP3P54852 163 aa10.82□□□□□ -0.68
CFTRP1-201ENST00000456646 CADPS2Q86UW7 1296 aa10.82□□□□□ -0.68
CFTRP1-201ENST00000456646 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
CFTRP1-201ENST00000456646 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
CFTRP1-201ENST00000456646 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
CFTRP1-201ENST00000456646 MFSD10Q14728 455 aa10.79□□□□□ -0.68
CFTRP1-201ENST00000456646 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
CFTRP1-201ENST00000456646 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
CFTRP1-201ENST00000456646 PTCD2Q8WV60 388 aaKnown RBP10.79□□□□□ -0.68
CFTRP1-201ENST00000456646 POTEB3A0JP26 581 aa10.78□□□□□ -0.68
CFTRP1-201ENST00000456646 POTEBQ6S5H4 581 aa10.78□□□□□ -0.68
CFTRP1-201ENST00000456646 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
CFTRP1-201ENST00000456646 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
CFTRP1-201ENST00000456646 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
CFTRP1-201ENST00000456646 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
CFTRP1-201ENST00000456646 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
CFTRP1-201ENST00000456646 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
CFTRP1-201ENST00000456646 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
CFTRP1-201ENST00000456646 DDX27Q96GQ7 796 aaKnown RBP10.74□□□□□ -0.69
CFTRP1-201ENST00000456646 KDM4FA0A1W2PPD8 638 aa10.73□□□□□ -0.69
CFTRP1-201ENST00000456646 ERBB3P21860 1342 aa10.71□□□□□ -0.69
CFTRP1-201ENST00000456646 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
CFTRP1-201ENST00000456646 NUDT7P0C024 238 aa10.7□□□□□ -0.7
CFTRP1-201ENST00000456646 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
CFTRP1-201ENST00000456646 TBC1D12O60347 775 aa10.67□□□□□ -0.7
CFTRP1-201ENST00000456646 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
CFTRP1-201ENST00000456646 CAMK2BQ13554 666 aa10.65□□□□□ -0.7
CFTRP1-201ENST00000456646 ZNF687Q8N1G0 1237 aa10.64□□□□□ -0.71
CFTRP1-201ENST00000456646 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
CFTRP1-201ENST00000456646 LHX6Q9UPM6 363 aa10.64□□□□□ -0.71
CFTRP1-201ENST00000456646 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
CFTRP1-201ENST00000456646 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
CFTRP1-201ENST00000456646 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
CFTRP1-201ENST00000456646 PSDA5PKW4 1024 aaPredicted RBP10.58□□□□□ -0.72
CFTRP1-201ENST00000456646 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
CFTRP1-201ENST00000456646 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
CFTRP1-201ENST00000456646 EVI5O60447 810 aa10.55□□□□□ -0.72
CFTRP1-201ENST00000456646 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
CFTRP1-201ENST00000456646 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
CFTRP1-201ENST00000456646 E2F4Q16254 413 aa10.52□□□□□ -0.73
CFTRP1-201ENST00000456646 PBX2P40425 430 aa10.51□□□□□ -0.73
CFTRP1-201ENST00000456646 WDR70Q9NW82 654 aa10.51□□□□□ -0.73
CFTRP1-201ENST00000456646 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
CFTRP1-201ENST00000456646 FOSBP53539 338 aa10.5□□□□□ -0.73
CFTRP1-201ENST00000456646 DPYSL4O14531 572 aa10.49□□□□□ -0.73
CFTRP1-201ENST00000456646 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
CFTRP1-201ENST00000456646 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
CFTRP1-201ENST00000456646 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
CFTRP1-201ENST00000456646 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
CFTRP1-201ENST00000456646 PDIA6Q15084 440 aa10.45□□□□□ -0.74
CFTRP1-201ENST00000456646 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
CFTRP1-201ENST00000456646 PTGER2P43116 358 aa10.44□□□□□ -0.74
CFTRP1-201ENST00000456646 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
CFTRP1-201ENST00000456646 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
CFTRP1-201ENST00000456646 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
CFTRP1-201ENST00000456646 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
CFTRP1-201ENST00000456646 PCDHGA10Q9Y5H3 936 aa10.42□□□□□ -0.74
CFTRP1-201ENST00000456646 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
CFTRP1-201ENST00000456646 PHF14O94880 888 aa10.4□□□□□ -0.74
CFTRP1-201ENST00000456646 PSEN2P49810 448 aa10.4□□□□□ -0.74
CFTRP1-201ENST00000456646 ANKRD13DQ6ZTN6 518 aa10.39□□□□□ -0.75
CFTRP1-201ENST00000456646 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
CFTRP1-201ENST00000456646 ADAM33Q9BZ11 813 aa10.38□□□□□ -0.75
CFTRP1-201ENST00000456646 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
CFTRP1-201ENST00000456646 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
CFTRP1-201ENST00000456646 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
CFTRP1-201ENST00000456646 TK2O00142 265 aa10.36□□□□□ -0.75
CFTRP1-201ENST00000456646 KCNV2Q8TDN2 545 aa10.36□□□□□ -0.75
CFTRP1-201ENST00000456646 KCNK17Q96T54 332 aa10.36□□□□□ -0.75
CFTRP1-201ENST00000456646 EPAS1Q99814 870 aa10.36□□□□□ -0.75
CFTRP1-201ENST00000456646 PTPREP23469 700 aa10.35□□□□□ -0.75
CFTRP1-201ENST00000456646 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
CFTRP1-201ENST00000456646 ADGRD1Q6QNK2 874 aa10.34□□□□□ -0.75
CFTRP1-201ENST00000456646 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms