RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
CSTF1-204ENST00000452950 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
CSTF1-204ENST00000452950 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
CSTF1-204ENST00000452950 POTEMA6NI47 508 aa12.12□□□□□ -0.47
CSTF1-204ENST00000452950 STK25O00506 426 aa12.12□□□□□ -0.47
CSTF1-204ENST00000452950 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
CSTF1-204ENST00000452950 POTEGQ6S5H5 508 aa12.1□□□□□ -0.47
CSTF1-204ENST00000452950 RYDENQ9NUL5 291 aaKnown RBP12.1□□□□□ -0.47
CSTF1-204ENST00000452950 LMOD2Q6P5Q4 547 aa12.07□□□□□ -0.48
CSTF1-204ENST00000452950 C3orf67Q6ZVT6 689 aa12.07□□□□□ -0.48
CSTF1-204ENST00000452950 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
CSTF1-204ENST00000452950 SOX12O15370 315 aa12.03□□□□□ -0.48
CSTF1-204ENST00000452950 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
CSTF1-204ENST00000452950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSTF1-204ENST00000452950 G3V3G9 751 aa12.02□□□□□ -0.49
CSTF1-204ENST00000452950 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
CSTF1-204ENST00000452950 ST18O60284 1047 aa11.99□□□□□ -0.49
CSTF1-204ENST00000452950 STK24Q9Y6E0 443 aa11.99□□□□□ -0.49
CSTF1-204ENST00000452950 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
CSTF1-204ENST00000452950 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
CSTF1-204ENST00000452950 SNPHO15079 494 aa11.97□□□□□ -0.49
CSTF1-204ENST00000452950 KCNV2Q8TDN2 545 aa11.97□□□□□ -0.49
CSTF1-204ENST00000452950 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
CSTF1-204ENST00000452950 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.49
CSTF1-204ENST00000452950 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-204ENST00000452950 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
CSTF1-204ENST00000452950 NLRP6P59044 892 aa11.91□□□□□ -0.5
CSTF1-204ENST00000452950 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
CSTF1-204ENST00000452950 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
CSTF1-204ENST00000452950 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
CSTF1-204ENST00000452950 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
CSTF1-204ENST00000452950 PODXL2Q9NZ53 605 aa11.88□□□□□ -0.51
CSTF1-204ENST00000452950 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
CSTF1-204ENST00000452950 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
CSTF1-204ENST00000452950 RANGAP1P46060 587 aaPredicted RBP11.83□□□□□ -0.52
CSTF1-204ENST00000452950 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
CSTF1-204ENST00000452950 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
CSTF1-204ENST00000452950 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
CSTF1-204ENST00000452950 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
CSTF1-204ENST00000452950 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
CSTF1-204ENST00000452950 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
CSTF1-204ENST00000452950 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CSTF1-204ENST00000452950 EMP3P54852 163 aa11.74□□□□□ -0.53
CSTF1-204ENST00000452950 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
CSTF1-204ENST00000452950 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
CSTF1-204ENST00000452950 PPP1R37O75864 691 aa11.7□□□□□ -0.54
CSTF1-204ENST00000452950 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
CSTF1-204ENST00000452950 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-204ENST00000452950 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
CSTF1-204ENST00000452950 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-204ENST00000452950 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
CSTF1-204ENST00000452950 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
CSTF1-204ENST00000452950 SEMA3EO15041 775 aa11.66□□□□□ -0.54
CSTF1-204ENST00000452950 E2F4Q16254 413 aa11.66□□□□□ -0.54
CSTF1-204ENST00000452950 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
CSTF1-204ENST00000452950 ZMYND10O75800 440 aa11.65□□□□□ -0.54
CSTF1-204ENST00000452950 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
CSTF1-204ENST00000452950 C2orf72A6NCS6 295 aa11.64□□□□□ -0.55
CSTF1-204ENST00000452950 KIF3CO14782 793 aa11.63□□□□□ -0.55
CSTF1-204ENST00000452950 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
CSTF1-204ENST00000452950 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
CSTF1-204ENST00000452950 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
CSTF1-204ENST00000452950 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
CSTF1-204ENST00000452950 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
CSTF1-204ENST00000452950 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
CSTF1-204ENST00000452950 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
CSTF1-204ENST00000452950 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
CSTF1-204ENST00000452950 ERBB3P21860 1342 aa11.59□□□□□ -0.55
CSTF1-204ENST00000452950 ARSIQ5FYB1 569 aa11.58□□□□□ -0.56
CSTF1-204ENST00000452950 ABCC9O60706 1549 aa11.56□□□□□ -0.56
CSTF1-204ENST00000452950 BARGINQ6ZT62 677 aa11.56□□□□□ -0.56
CSTF1-204ENST00000452950 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
CSTF1-204ENST00000452950 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSTF1-204ENST00000452950 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
CSTF1-204ENST00000452950 AK7Q96M32 723 aa11.52□□□□□ -0.57
CSTF1-204ENST00000452950 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
CSTF1-204ENST00000452950 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
CSTF1-204ENST00000452950 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
CSTF1-204ENST00000452950 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
CSTF1-204ENST00000452950 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
CSTF1-204ENST00000452950 SLC34A2O95436 690 aa11.48□□□□□ -0.57
CSTF1-204ENST00000452950 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
CSTF1-204ENST00000452950 HRCP23327 699 aa11.46□□□□□ -0.57
CSTF1-204ENST00000452950 ARID3AQ99856 593 aa11.46□□□□□ -0.57
CSTF1-204ENST00000452950 FOXK1P85037 733 aa11.45□□□□□ -0.58
CSTF1-204ENST00000452950 MMRN1Q13201 1228 aa11.45□□□□□ -0.58
CSTF1-204ENST00000452950 KDM4CQ9H3R0 1056 aa11.45□□□□□ -0.58
CSTF1-204ENST00000452950 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
CSTF1-204ENST00000452950 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
CSTF1-204ENST00000452950 NUDT7P0C024 238 aa11.44□□□□□ -0.58
CSTF1-204ENST00000452950 ZNF687Q8N1G0 1237 aa11.44□□□□□ -0.58
CSTF1-204ENST00000452950 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
CSTF1-204ENST00000452950 PLPP6Q8IY26 295 aa11.43□□□□□ -0.58
CSTF1-204ENST00000452950 DSG2Q14126 1118 aa11.42□□□□□ -0.58
CSTF1-204ENST00000452950 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
CSTF1-204ENST00000452950 ARIH1Q9Y4X5 557 aaPredicted RBP11.41□□□□□ -0.58
CSTF1-204ENST00000452950 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
CSTF1-204ENST00000452950 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
CSTF1-204ENST00000452950 PTCD2Q8WV60 388 aaKnown RBP11.38□□□□□ -0.59
CSTF1-204ENST00000452950 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms