RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
SGCE-208ENST00000450385 ARHGAP5Q13017 1502 aa25.73■■□□□ 1.71
SGCE-208ENST00000450385 ADAMTSL3P82987 1691 aa25.72■■□□□ 1.71
SGCE-208ENST00000450385 ZNF518AQ6AHZ1 1483 aa25.72■■□□□ 1.71
SGCE-208ENST00000450385 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
SGCE-208ENST00000450385 ZFYVE16Q7Z3T8 1539 aa25.71■■□□□ 1.71
SGCE-208ENST00000450385 BCORL1Q5H9F3 1711 aa25.7■■□□□ 1.7
SGCE-208ENST00000450385 CEP162Q5TB80 1403 aa25.7■■□□□ 1.7
SGCE-208ENST00000450385 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
SGCE-208ENST00000450385 PREX2Q70Z35 1606 aa25.69■■□□□ 1.7
SGCE-208ENST00000450385 CDC42BPAQ5VT25 1732 aa25.64■■□□□ 1.7
SGCE-208ENST00000450385 ATP10AO60312 1499 aa25.64■■□□□ 1.69
SGCE-208ENST00000450385 KDM5CP41229 1560 aa25.63■■□□□ 1.69
SGCE-208ENST00000450385 YEATS2Q9ULM3 1422 aa25.62■■□□□ 1.69
SGCE-208ENST00000450385 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
SGCE-208ENST00000450385 PTPRMP28827 1452 aa25.6■■□□□ 1.69
SGCE-208ENST00000450385 AFAP1Q8N556 730 aa25.59■■□□□ 1.69
SGCE-208ENST00000450385 MLH3Q9UHC1 1453 aa25.59■■□□□ 1.69
SGCE-208ENST00000450385 C9orf84Q5VXU9 1444 aa25.58■■□□□ 1.69
SGCE-208ENST00000450385 ABCC1P33527 1531 aa25.58■■□□□ 1.68
SGCE-208ENST00000450385 GPATCH8Q9UKJ3 1502 aaKnown RBP25.58■■□□□ 1.68
SGCE-208ENST00000450385 HECW2Q9P2P5 1572 aa25.55■■□□□ 1.68
SGCE-208ENST00000450385 PLEKHH2Q8IVE3 1493 aa25.54■■□□□ 1.68
SGCE-208ENST00000450385 MADDQ8WXG6 1647 aa25.54■■□□□ 1.68
SGCE-208ENST00000450385 ITSN2Q9NZM3 1697 aa25.54■■□□□ 1.68
SGCE-208ENST00000450385 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
SGCE-208ENST00000450385 KIAA1107Q9UPP5 1409 aa25.54■■□□□ 1.68
SGCE-208ENST00000450385 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
SGCE-208ENST00000450385 CFDP1Q9UEE9 299 aaPredicted RBP25.52■■□□□ 1.68
SGCE-208ENST00000450385 EHBP1L1Q8N3D4 1523 aa25.52■■□□□ 1.68
SGCE-208ENST00000450385 LOC105371045A0A1W2PR82 267 aa25.51■■□□□ 1.67
SGCE-208ENST00000450385 MYT1LQ9UL68 1186 aa25.5■■□□□ 1.67
SGCE-208ENST00000450385 ARHGEF12Q9NZN5 1544 aa25.49■■□□□ 1.67
SGCE-208ENST00000450385 TRAPPC8Q9Y2L5 1435 aa25.48■■□□□ 1.67
SGCE-208ENST00000450385 VPS8Q8N3P4 1428 aa25.46■■□□□ 1.67
SGCE-208ENST00000450385 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
SGCE-208ENST00000450385 ZNF777Q9ULD5 760 aaPredicted RBP25.46■■□□□ 1.67
SGCE-208ENST00000450385 SAMD9LQ8IVG5 1584 aa25.46■■□□□ 1.67
SGCE-208ENST00000450385 RIMS1Q86UR5 1692 aaKnown RBP25.45■■□□□ 1.67
SGCE-208ENST00000450385 DIP2CQ9Y2E4 1556 aa25.45■■□□□ 1.66
SGCE-208ENST00000450385 FER1L4A9Z1Z3 1794 aa25.44■■□□□ 1.66
SGCE-208ENST00000450385 AGLP35573 1532 aa25.43■■□□□ 1.66
SGCE-208ENST00000450385 KIDINS220Q9ULH0 1771 aa25.42■■□□□ 1.66
SGCE-208ENST00000450385 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
SGCE-208ENST00000450385 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
SGCE-208ENST00000450385 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
SGCE-208ENST00000450385 ABCA6Q8N139 1617 aa25.4■■□□□ 1.66
SGCE-208ENST00000450385 TIAM1Q13009 1591 aa25.39■■□□□ 1.66
SGCE-208ENST00000450385 SYCP2Q9BX26 1530 aa25.39■■□□□ 1.66
SGCE-208ENST00000450385 HNRNPMP52272 730 aaKnown RBP eCLIP25.39■■□□□ 1.665e-8■■■■■ 27.1
SGCE-208ENST00000450385 MLECQ14165 292 aa25.39■■□□□ 1.66
SGCE-208ENST00000450385 RSPH4AQ5TD94 716 aa25.39■■□□□ 1.66
SGCE-208ENST00000450385 SETD1BQ9UPS6 1966 aaKnown RBP25.38■■□□□ 1.65
SGCE-208ENST00000450385 NCOA2Q15596 1464 aa25.34■■□□□ 1.65
SGCE-208ENST00000450385 LRRC9Q6ZRR7 1453 aa25.32■■□□□ 1.64
SGCE-208ENST00000450385 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
SGCE-208ENST00000450385 RTEL1-TNFRSF6BF6WH68 1400 aa25.31■■□□□ 1.64
SGCE-208ENST00000450385 ESF1Q9H501 851 aaKnown RBP25.31■■□□□ 1.64
SGCE-208ENST00000450385 MBD5Q9P267 1494 aa25.3■■□□□ 1.64
SGCE-208ENST00000450385 CNTLNQ9NXG0 1405 aa25.29■■□□□ 1.64
SGCE-208ENST00000450385 LMTK3Q96Q04 1460 aa25.29■■□□□ 1.64
SGCE-208ENST00000450385 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
SGCE-208ENST00000450385 PPP6R1Q9UPN7 881 aa25.28■■□□□ 1.64
SGCE-208ENST00000450385 ZNF644Q9H582 1327 aaPredicted RBP25.26■■□□□ 1.63
SGCE-208ENST00000450385 ADGBQ8N7X0 1667 aa25.25■■□□□ 1.63
SGCE-208ENST00000450385 A2MP01023 1474 aa25.24■■□□□ 1.63
SGCE-208ENST00000450385 APLP2Q06481 763 aa25.24■■□□□ 1.63
SGCE-208ENST00000450385 PLXNC1O60486 1568 aa25.22■■□□□ 1.63
SGCE-208ENST00000450385 PREX1Q8TCU6 1659 aa25.21■■□□□ 1.63
SGCE-208ENST00000450385 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
SGCE-208ENST00000450385 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
SGCE-208ENST00000450385 MIA2Q96PC5 1412 aa25.2■■□□□ 1.62
SGCE-208ENST00000450385 ARHGEF5Q12774 1597 aa25.19■■□□□ 1.62
SGCE-208ENST00000450385 MROH2AA6NES4 1674 aa25.19■■□□□ 1.62
SGCE-208ENST00000450385 TSPY4P0CV99 314 aa25.18■■□□□ 1.62
SGCE-208ENST00000450385 TSPY10P0CW01 314 aa25.18■■□□□ 1.62
SGCE-208ENST00000450385 PLPPR3Q6T4P5 718 aa25.17■■□□□ 1.62
SGCE-208ENST00000450385 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
SGCE-208ENST00000450385 C3P01024 1663 aa25.17■■□□□ 1.62
SGCE-208ENST00000450385 CEBPAP49715 358 aaPredicted RBP25.16■■□□□ 1.62
SGCE-208ENST00000450385 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
SGCE-208ENST00000450385 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
SGCE-208ENST00000450385 UHRF1BP1Q6BDS2 1440 aa25.13■■□□□ 1.61
SGCE-208ENST00000450385 NPATQ14207 1427 aa25.12■■□□□ 1.61
SGCE-208ENST00000450385 ZMYM3Q14202 1370 aa25.11■■□□□ 1.61
SGCE-208ENST00000450385 DMRT2Q9Y5R5 561 aa25.09■■□□□ 1.61
SGCE-208ENST00000450385 FAM135AQ9P2D6 1515 aa25.08■■□□□ 1.61
SGCE-208ENST00000450385 HSPA2P54652 639 aa25.08■■□□□ 1.61
SGCE-208ENST00000450385 GGT6Q6P531 493 aa25.08■■□□□ 1.61
SGCE-208ENST00000450385 MAST1Q9Y2H9 1570 aa25.05■■□□□ 1.6
SGCE-208ENST00000450385 CLTCQ00610 1675 aaKnown RBP25.03■■□□□ 1.6
SGCE-208ENST00000450385 KIF3BO15066 747 aa25.01■■□□□ 1.59
SGCE-208ENST00000450385 ILDR1Q86SU0 546 aaPredicted RBP24.97■■□□□ 1.59
SGCE-208ENST00000450385 PTPRKQ15262 1439 aa24.95■■□□□ 1.58
SGCE-208ENST00000450385 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
SGCE-208ENST00000450385 STRCQ7RTU9 1775 aa24.94■■□□□ 1.58
SGCE-208ENST00000450385 SHANK2Q9UPX8 1470 aa24.94■■□□□ 1.58
SGCE-208ENST00000450385 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
SGCE-208ENST00000450385 WASHC2CQ9Y4E1 1318 aa24.93■■□□□ 1.58
SGCE-208ENST00000450385 KDM5DQ9BY66 1539 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms