RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 URB2Q14146 1524 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-209ENST00000448940 PAXIP1Q6ZW49 1069 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-209ENST00000448940 TMC1Q8TDI8 760 aa7.72□□□□□ -1.17
CDC42BPA-209ENST00000448940 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-209ENST00000448940 ANKRD30AQ9BXX3 1397 aa7.72□□□□□ -1.17
CDC42BPA-209ENST00000448940 KIAA0586Q9BVV6 1533 aa7.72□□□□□ -1.17
CDC42BPA-209ENST00000448940 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.17
CDC42BPA-209ENST00000448940 PLB1Q6P1J6 1458 aa7.71□□□□□ -1.18
CDC42BPA-209ENST00000448940 TEX14Q8IWB6 1497 aa7.71□□□□□ -1.18
CDC42BPA-209ENST00000448940 AFAP1Q8N556 730 aa7.71□□□□□ -1.18
CDC42BPA-209ENST00000448940 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-209ENST00000448940 STK26Q9P289 416 aa7.71□□□□□ -1.18
CDC42BPA-209ENST00000448940 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.7□□□□□ -1.18
CDC42BPA-209ENST00000448940 TONSLQ96HA7 1378 aa7.7□□□□□ -1.18
CDC42BPA-209ENST00000448940 GRIN2AQ12879 1464 aa7.7□□□□□ -1.18
CDC42BPA-209ENST00000448940 CEP162Q5TB80 1403 aa7.7□□□□□ -1.18
CDC42BPA-209ENST00000448940 UNC13AQ9UPW8 1703 aa7.69□□□□□ -1.18
CDC42BPA-209ENST00000448940 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
CDC42BPA-209ENST00000448940 ZNF330Q9Y3S2 320 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-209ENST00000448940 TXNDC2Q86VQ3 553 aa7.69□□□□□ -1.18
CDC42BPA-209ENST00000448940 SYTL4Q96C24 671 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-209ENST00000448940 NUTM2FA1L443 756 aa7.68□□□□□ -1.18
CDC42BPA-209ENST00000448940 SAFB2Q14151 953 aaKnown RBP eCLIP7.67□□□□□ -1.186e-6■■■□□ 18.1
CDC42BPA-209ENST00000448940 EIF4G2P78344 907 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDC42BPA-209ENST00000448940 NGDNQ8NEJ9 315 aaKnown RBP7.67□□□□□ -1.18
CDC42BPA-209ENST00000448940 ABCA10Q8WWZ4 1543 aa7.67□□□□□ -1.18
CDC42BPA-209ENST00000448940 GOLGA2Q08379 1002 aa7.67□□□□□ -1.18
CDC42BPA-209ENST00000448940 AKNAQ7Z591 1439 aa7.66□□□□□ -1.18
CDC42BPA-209ENST00000448940 GTF2E1P29083 439 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-209ENST00000448940 CDCA8Q53HL2 280 aa7.66□□□□□ -1.18
CDC42BPA-209ENST00000448940 SCAPERQ9BY12 1400 aa7.66□□□□□ -1.18
CDC42BPA-209ENST00000448940 NUP155O75694 1391 aa7.65□□□□□ -1.18
CDC42BPA-209ENST00000448940 PPP6R1Q9UPN7 881 aa7.65□□□□□ -1.18
CDC42BPA-209ENST00000448940 VGFO15240 615 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-209ENST00000448940 PDE3BQ13370 1112 aa7.64□□□□□ -1.19
CDC42BPA-209ENST00000448940 ADAMTS2O95450 1211 aa7.64□□□□□ -1.19
CDC42BPA-209ENST00000448940 PEG3Q9GZU2 1588 aa7.64□□□□□ -1.19
CDC42BPA-209ENST00000448940 PSME1Q06323 249 aa7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 PHLDB1Q86UU1 1377 aa7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 ARHGAP35Q9NRY4 1499 aa7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 CUX1P39880 1505 aa7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 LMTK3Q96Q04 1460 aa7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 KRI1Q8N9T8 703 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
CDC42BPA-209ENST00000448940 HSPA2P54652 639 aa7.62□□□□□ -1.19
CDC42BPA-209ENST00000448940 WDR62O43379 1518 aa7.62□□□□□ -1.19
CDC42BPA-209ENST00000448940 ARHGAP5Q13017 1502 aa7.62□□□□□ -1.19
CDC42BPA-209ENST00000448940 PKD2Q13563 968 aa7.62□□□□□ -1.19
CDC42BPA-209ENST00000448940 CEBPAP49715 358 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-209ENST00000448940 DENND4BO75064 1496 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-209ENST00000448940 YTHDC1Q96MU7 727 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-209ENST00000448940 ZRANB1Q9UGI0 708 aa7.61□□□□□ -1.19
CDC42BPA-209ENST00000448940 CWC22Q9HCG8 908 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-209ENST00000448940 ASXL2Q76L83 1435 aa7.6□□□□□ -1.19
CDC42BPA-209ENST00000448940 PRDM2Q13029 1718 aa7.6□□□□□ -1.19
CDC42BPA-209ENST00000448940 NBPF8Q3BBV2 869 aa7.59□□□□□ -1.19
CDC42BPA-209ENST00000448940 NBPF14Q5TI25 921 aa7.59□□□□□ -1.19
CDC42BPA-209ENST00000448940 DCAF11Q8TEB1 546 aa7.59□□□□□ -1.19
CDC42BPA-209ENST00000448940 PLEKHH2Q8IVE3 1493 aa7.58□□□□□ -1.2
CDC42BPA-209ENST00000448940 ERICH3Q5RHP9 1530 aa7.58□□□□□ -1.2
CDC42BPA-209ENST00000448940 HDGFL2Q7Z4V5 671 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-209ENST00000448940 BEGAINQ9BUH8 593 aa7.58□□□□□ -1.2
CDC42BPA-209ENST00000448940 GRM1Q13255 1194 aa7.57□□□□□ -1.2
CDC42BPA-209ENST00000448940 STRN4Q9NRL3 753 aa7.57□□□□□ -1.2
CDC42BPA-209ENST00000448940 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-209ENST00000448940 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-209ENST00000448940 ISY1Q9ULR0 285 aaKnown RBP7.57□□□□□ -1.2
CDC42BPA-209ENST00000448940 ARHGEF11O15085 1522 aa7.57□□□□□ -1.2
CDC42BPA-209ENST00000448940 CARD11Q9BXL7 1154 aa7.56□□□□□ -1.2
CDC42BPA-209ENST00000448940 SLC52A1Q9NWF4 448 aa7.56□□□□□ -1.2
CDC42BPA-209ENST00000448940 CFAP53Q96M91 514 aa7.55□□□□□ -1.2
CDC42BPA-209ENST00000448940 SLC26A8Q96RN1 970 aa7.55□□□□□ -1.2
CDC42BPA-209ENST00000448940 VPS8Q8N3P4 1428 aa7.55□□□□□ -1.2
CDC42BPA-209ENST00000448940 C8orf37Q96NL8 207 aa7.55□□□□□ -1.2
CDC42BPA-209ENST00000448940 ADGRL1O94910 1474 aa7.55□□□□□ -1.2
CDC42BPA-209ENST00000448940 TSPOAP1O95153 1857 aa7.55□□□□□ -1.2
CDC42BPA-209ENST00000448940 IQGAP2Q13576 1575 aa7.54□□□□□ -1.2
CDC42BPA-209ENST00000448940 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
CDC42BPA-209ENST00000448940 TROQ12816 1431 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-209ENST00000448940 BCL11BQ9C0K0 894 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-209ENST00000448940 KIF15Q9NS87 1388 aa7.53□□□□□ -1.2
CDC42BPA-209ENST00000448940 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
CDC42BPA-209ENST00000448940 GPR162Q16538 588 aa7.53□□□□□ -1.2
CDC42BPA-209ENST00000448940 LTV1Q96GA3 475 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-209ENST00000448940 MYOM3Q5VTT5 1437 aa7.53□□□□□ -1.2
CDC42BPA-209ENST00000448940 TOP2BQ02880 1626 aa7.53□□□□□ -1.2
CDC42BPA-209ENST00000448940 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
CDC42BPA-209ENST00000448940 RUSC2Q8N2Y8 1516 aa7.52□□□□□ -1.21
CDC42BPA-209ENST00000448940 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
CDC42BPA-209ENST00000448940 HMGB2P26583 209 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-209ENST00000448940 KANK4Q5T7N3 995 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-209ENST00000448940 KNSTRNQ9Y448 316 aa7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 GPRASP1Q5JY77 1395 aa7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 NEFLP07196 543 aa7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 CADPS2Q86UW7 1296 aa7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 TERF2IPQ9NYB0 399 aa7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 NUDCQ9Y266 331 aa7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 ZNF644Q9H582 1327 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 EIF4G3O43432 1585 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-209ENST00000448940 FANCAO15360 1455 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms