RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
AC007879.3-202ENST00000448786 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
AC007879.3-202ENST00000448786 HOXB3P14651 431 aaPredicted RBP10.3□□□□□ -0.76
AC007879.3-202ENST00000448786 EMP3P54852 163 aa10.3□□□□□ -0.76
AC007879.3-202ENST00000448786 RYDENQ9NUL5 291 aaKnown RBP10.3□□□□□ -0.76
AC007879.3-202ENST00000448786 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
AC007879.3-202ENST00000448786 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
AC007879.3-202ENST00000448786 PPP1R37O75864 691 aa10.25□□□□□ -0.77
AC007879.3-202ENST00000448786 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
AC007879.3-202ENST00000448786 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
AC007879.3-202ENST00000448786 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
AC007879.3-202ENST00000448786 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
AC007879.3-202ENST00000448786 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
AC007879.3-202ENST00000448786 HOXB1P14653 301 aaPredicted RBP10.23□□□□□ -0.77
AC007879.3-202ENST00000448786 ZSWIM6Q9HCJ5 1215 aa10.23□□□□□ -0.77
AC007879.3-202ENST00000448786 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
AC007879.3-202ENST00000448786 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
AC007879.3-202ENST00000448786 KIF3CO14782 793 aa10.19□□□□□ -0.78
AC007879.3-202ENST00000448786 ERBB3P21860 1342 aa10.18□□□□□ -0.78
AC007879.3-202ENST00000448786 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
AC007879.3-202ENST00000448786 HS3ST6Q96QI5 342 aa10.18□□□□□ -0.78
AC007879.3-202ENST00000448786 ARSIQ5FYB1 569 aa10.14□□□□□ -0.79
AC007879.3-202ENST00000448786 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
AC007879.3-202ENST00000448786 GPHNQ9NQX3 736 aaPredicted RBP10.11□□□□□ -0.79
AC007879.3-202ENST00000448786 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
AC007879.3-202ENST00000448786 VARS2Q5ST30 1063 aaKnown RBP10.1□□□□□ -0.79
AC007879.3-202ENST00000448786 SLC34A2O95436 690 aa10.09□□□□□ -0.79
AC007879.3-202ENST00000448786 FOXK1P85037 733 aa10.08□□□□□ -0.8
AC007879.3-202ENST00000448786 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
AC007879.3-202ENST00000448786 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
AC007879.3-202ENST00000448786 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
AC007879.3-202ENST00000448786 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
AC007879.3-202ENST00000448786 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
AC007879.3-202ENST00000448786 NUDT7P0C024 238 aa10.04□□□□□ -0.8
AC007879.3-202ENST00000448786 PDE4AP27815 886 aa10.04□□□□□ -0.8
AC007879.3-202ENST00000448786 DSG2Q14126 1118 aa10.04□□□□□ -0.8
AC007879.3-202ENST00000448786 TBC1D12O60347 775 aa10.03□□□□□ -0.8
AC007879.3-202ENST00000448786 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
AC007879.3-202ENST00000448786 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
AC007879.3-202ENST00000448786 PTCD2Q8WV60 388 aaKnown RBP10.01□□□□□ -0.81
AC007879.3-202ENST00000448786 CRISPLD2Q9H0B8 497 aa10.01□□□□□ -0.81
AC007879.3-202ENST00000448786 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
AC007879.3-202ENST00000448786 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
AC007879.3-202ENST00000448786 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
AC007879.3-202ENST00000448786 LHX6Q9UPM6 363 aa9.97□□□□□ -0.81
AC007879.3-202ENST00000448786 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
AC007879.3-202ENST00000448786 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
AC007879.3-202ENST00000448786 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
AC007879.3-202ENST00000448786 UPF1Q92900 1129 aaKnown RBP eCLIP9.94□□□□□ -0.82
AC007879.3-202ENST00000448786 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
AC007879.3-202ENST00000448786 PBX2P40425 430 aa9.91□□□□□ -0.82
AC007879.3-202ENST00000448786 OXER1Q8TDS5 423 aa9.91□□□□□ -0.82
AC007879.3-202ENST00000448786 ANKRD13DQ6ZTN6 518 aa9.89□□□□□ -0.83
AC007879.3-202ENST00000448786 RNF166Q96A37 237 aaPredicted RBP9.89□□□□□ -0.83
AC007879.3-202ENST00000448786 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
AC007879.3-202ENST00000448786 MFSD10Q14728 455 aa9.88□□□□□ -0.83
AC007879.3-202ENST00000448786 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
AC007879.3-202ENST00000448786 CADPS2Q86UW7 1296 aa9.87□□□□□ -0.83
AC007879.3-202ENST00000448786 MAP3K9P80192 1104 aa9.86□□□□□ -0.83
AC007879.3-202ENST00000448786 LSM11P83369 360 aaKnown RBP eCLIP9.86□□□□□ -0.83
AC007879.3-202ENST00000448786 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
AC007879.3-202ENST00000448786 PTGER2P43116 358 aa9.85□□□□□ -0.83
AC007879.3-202ENST00000448786 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
AC007879.3-202ENST00000448786 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
AC007879.3-202ENST00000448786 AXIN2Q9Y2T1 843 aa9.84□□□□□ -0.83
AC007879.3-202ENST00000448786 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
AC007879.3-202ENST00000448786 MYT1LQ9UL68 1186 aa9.83□□□□□ -0.84
AC007879.3-202ENST00000448786 EVI5O60447 810 aa9.82□□□□□ -0.84
AC007879.3-202ENST00000448786 ZNF454Q8N9F8 522 aa9.81□□□□□ -0.84
AC007879.3-202ENST00000448786 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
AC007879.3-202ENST00000448786 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
AC007879.3-202ENST00000448786 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
AC007879.3-202ENST00000448786 KCNK17Q96T54 332 aa9.77□□□□□ -0.85
AC007879.3-202ENST00000448786 PSEN2P49810 448 aa9.76□□□□□ -0.85
AC007879.3-202ENST00000448786 FOSBP53539 338 aa9.75□□□□□ -0.85
AC007879.3-202ENST00000448786 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
AC007879.3-202ENST00000448786 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
AC007879.3-202ENST00000448786 TK2O00142 265 aa9.74□□□□□ -0.85
AC007879.3-202ENST00000448786 CAMK2BQ13554 666 aa9.74□□□□□ -0.85
AC007879.3-202ENST00000448786 ADGRD1Q6QNK2 874 aa9.74□□□□□ -0.85
AC007879.3-202ENST00000448786 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
AC007879.3-202ENST00000448786 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
AC007879.3-202ENST00000448786 PTPREP23469 700 aa9.72□□□□□ -0.85
AC007879.3-202ENST00000448786 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
AC007879.3-202ENST00000448786 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
AC007879.3-202ENST00000448786 DPYSL4O14531 572 aa9.7□□□□□ -0.86
AC007879.3-202ENST00000448786 E2F4Q16254 413 aa9.67□□□□□ -0.86
AC007879.3-202ENST00000448786 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
AC007879.3-202ENST00000448786 PHF14O94880 888 aa9.66□□□□□ -0.86
AC007879.3-202ENST00000448786 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
AC007879.3-202ENST00000448786 ADAM33Q9BZ11 813 aa9.66□□□□□ -0.86
AC007879.3-202ENST00000448786 VPS9D1Q9Y2B5 631 aa9.65□□□□□ -0.86
AC007879.3-202ENST00000448786 PCDHGA10Q9Y5H3 936 aa9.65□□□□□ -0.86
AC007879.3-202ENST00000448786 HRO43593 1189 aa9.64□□□□□ -0.87
AC007879.3-202ENST00000448786 EPAS1Q99814 870 aa9.64□□□□□ -0.87
AC007879.3-202ENST00000448786 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
AC007879.3-202ENST00000448786 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
AC007879.3-202ENST00000448786 PPP1R3GB7ZBB8 358 aa9.6□□□□□ -0.87
AC007879.3-202ENST00000448786 PDIA6Q15084 440 aa9.6□□□□□ -0.87
AC007879.3-202ENST00000448786 DDX12PQ92771 950 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms