RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
SHC1-210ENST00000448116 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
SHC1-210ENST00000448116 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
SHC1-210ENST00000448116 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
SHC1-210ENST00000448116 IQGAP2Q13576 1575 aa17.77■□□□□ 0.44
SHC1-210ENST00000448116 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.43
SHC1-210ENST00000448116 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
SHC1-210ENST00000448116 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
SHC1-210ENST00000448116 EIF5BO60841 1220 aaKnown RBP17.76■□□□□ 0.43
SHC1-210ENST00000448116 FBLN2P98095 1184 aa17.75■□□□□ 0.43
SHC1-210ENST00000448116 CCDC7Q96M83 1385 aa17.74■□□□□ 0.43
SHC1-210ENST00000448116 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
SHC1-210ENST00000448116 CNTLNQ9NXG0 1405 aa17.73■□□□□ 0.43
SHC1-210ENST00000448116 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
SHC1-210ENST00000448116 SENP3-EIF4A1A0A087X0R7 540 aa17.72■□□□□ 0.43
SHC1-210ENST00000448116 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
SHC1-210ENST00000448116 DAPK1P53355 1430 aa17.71■□□□□ 0.43
SHC1-210ENST00000448116 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
SHC1-210ENST00000448116 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
SHC1-210ENST00000448116 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
SHC1-210ENST00000448116 ABCC5O15440 1437 aa17.69■□□□□ 0.42
SHC1-210ENST00000448116 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
SHC1-210ENST00000448116 WDR62O43379 1518 aa17.68■□□□□ 0.42
SHC1-210ENST00000448116 GCC2Q8IWJ2 1684 aa17.68■□□□□ 0.42
SHC1-210ENST00000448116 NCOA1Q15788 1441 aa17.67■□□□□ 0.42
SHC1-210ENST00000448116 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
SHC1-210ENST00000448116 ADAMTS12P58397 1594 aa17.65■□□□□ 0.42
SHC1-210ENST00000448116 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
SHC1-210ENST00000448116 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
SHC1-210ENST00000448116 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
SHC1-210ENST00000448116 PKD2Q13563 968 aa17.64■□□□□ 0.42
SHC1-210ENST00000448116 RPRD2Q5VT52 1461 aaKnown RBP17.64■□□□□ 0.41
SHC1-210ENST00000448116 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
SHC1-210ENST00000448116 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
SHC1-210ENST00000448116 PPP4R2Q9NY27 417 aa17.63■□□□□ 0.41
SHC1-210ENST00000448116 NUP153P49790 1475 aaKnown RBP17.61■□□□□ 0.41
SHC1-210ENST00000448116 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
SHC1-210ENST00000448116 KIAA0586Q9BVV6 1533 aa17.6■□□□□ 0.41
SHC1-210ENST00000448116 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
SHC1-210ENST00000448116 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
SHC1-210ENST00000448116 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
SHC1-210ENST00000448116 MSH5O43196 834 aa17.59■□□□□ 0.41
SHC1-210ENST00000448116 TEX14Q8IWB6 1497 aa17.58■□□□□ 0.4
SHC1-210ENST00000448116 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
SHC1-210ENST00000448116 USP47Q96K76 1375 aa17.55■□□□□ 0.4
SHC1-210ENST00000448116 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
SHC1-210ENST00000448116 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
SHC1-210ENST00000448116 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
SHC1-210ENST00000448116 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
SHC1-210ENST00000448116 TROQ12816 1431 aaPredicted RBP17.54■□□□□ 0.4
SHC1-210ENST00000448116 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
SHC1-210ENST00000448116 SPATA31E1Q6ZUB1 1445 aa17.54■□□□□ 0.4
SHC1-210ENST00000448116 CARD11Q9BXL7 1154 aa17.53■□□□□ 0.4
SHC1-210ENST00000448116 JPH4Q96JJ6 628 aa17.53■□□□□ 0.4
SHC1-210ENST00000448116 CAMSAP2Q08AD1 1489 aa17.53■□□□□ 0.4
SHC1-210ENST00000448116 PZPP20742 1482 aa17.52■□□□□ 0.4
SHC1-210ENST00000448116 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
SHC1-210ENST00000448116 NUP155O75694 1391 aa17.52■□□□□ 0.39
SHC1-210ENST00000448116 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.39
SHC1-210ENST00000448116 TMC1Q8TDI8 760 aa17.52■□□□□ 0.39
SHC1-210ENST00000448116 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
SHC1-210ENST00000448116 TSPY4P0CV99 314 aa17.51■□□□□ 0.39
SHC1-210ENST00000448116 TSPY10P0CW01 314 aa17.51■□□□□ 0.39
SHC1-210ENST00000448116 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
SHC1-210ENST00000448116 GPATCH8Q9UKJ3 1502 aaKnown RBP17.49■□□□□ 0.39
SHC1-210ENST00000448116 DCAF11Q8TEB1 546 aa17.48■□□□□ 0.39
SHC1-210ENST00000448116 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHC1-210ENST00000448116 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
SHC1-210ENST00000448116 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
SHC1-210ENST00000448116 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
SHC1-210ENST00000448116 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
SHC1-210ENST00000448116 DHX29Q7Z478 1369 aaKnown RBP17.45■□□□□ 0.38
SHC1-210ENST00000448116 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
SHC1-210ENST00000448116 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
SHC1-210ENST00000448116 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
SHC1-210ENST00000448116 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
SHC1-210ENST00000448116 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
SHC1-210ENST00000448116 KIF14Q15058 1648 aa17.42■□□□□ 0.38
SHC1-210ENST00000448116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHC1-210ENST00000448116 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
SHC1-210ENST00000448116 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
SHC1-210ENST00000448116 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
SHC1-210ENST00000448116 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
SHC1-210ENST00000448116 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
SHC1-210ENST00000448116 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
SHC1-210ENST00000448116 MBD5Q9P267 1494 aa17.35■□□□□ 0.37
SHC1-210ENST00000448116 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
SHC1-210ENST00000448116 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
SHC1-210ENST00000448116 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
SHC1-210ENST00000448116 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
SHC1-210ENST00000448116 ROCK2O75116 1388 aaKnown RBP17.34■□□□□ 0.37
SHC1-210ENST00000448116 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
SHC1-210ENST00000448116 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
SHC1-210ENST00000448116 ATP10BO94823 1461 aa17.32■□□□□ 0.36
SHC1-210ENST00000448116 NBPF1Q3BBV0 1214 aa17.31■□□□□ 0.36
SHC1-210ENST00000448116 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
SHC1-210ENST00000448116 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
SHC1-210ENST00000448116 RALBP1Q15311 655 aa17.29■□□□□ 0.36
SHC1-210ENST00000448116 KDM5CP41229 1560 aa17.29■□□□□ 0.36
SHC1-210ENST00000448116 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms