RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
SREBF1-207ENST00000447641 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-207ENST00000447641 DENND4BO75064 1496 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-207ENST00000447641 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
SREBF1-207ENST00000447641 TROQ12816 1431 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-207ENST00000447641 AKNAQ7Z591 1439 aa22.5■■□□□ 1.19
SREBF1-207ENST00000447641 FANCAO15360 1455 aa22.5■■□□□ 1.19
SREBF1-207ENST00000447641 FER1L4A9Z1Z3 1794 aa22.48■■□□□ 1.19
SREBF1-207ENST00000447641 YEATS2Q9ULM3 1422 aa22.48■■□□□ 1.19
SREBF1-207ENST00000447641 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
SREBF1-207ENST00000447641 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-207ENST00000447641 KIF14Q15058 1648 aa22.43■■□□□ 1.18
SREBF1-207ENST00000447641 HSPA2P54652 639 aa22.38■■□□□ 1.17
SREBF1-207ENST00000447641 PLCH2O75038 1416 aa22.38■■□□□ 1.17
SREBF1-207ENST00000447641 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
SREBF1-207ENST00000447641 MAP3K1Q13233 1512 aa22.37■■□□□ 1.17
SREBF1-207ENST00000447641 MAGI2Q86UL8 1455 aa22.37■■□□□ 1.17
SREBF1-207ENST00000447641 MYO5CQ9NQX4 1742 aa22.37■■□□□ 1.17
SREBF1-207ENST00000447641 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
SREBF1-207ENST00000447641 TIAM1Q13009 1591 aa22.36■■□□□ 1.17
SREBF1-207ENST00000447641 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
SREBF1-207ENST00000447641 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
SREBF1-207ENST00000447641 EHBP1L1Q8N3D4 1523 aa22.31■■□□□ 1.16
SREBF1-207ENST00000447641 SCAPERQ9BY12 1400 aa22.3■■□□□ 1.16
SREBF1-207ENST00000447641 STRCQ7RTU9 1775 aa22.3■■□□□ 1.16
SREBF1-207ENST00000447641 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
SREBF1-207ENST00000447641 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
SREBF1-207ENST00000447641 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
SREBF1-207ENST00000447641 KDM5CP41229 1560 aa22.27■■□□□ 1.16
SREBF1-207ENST00000447641 CDC42BPAQ5VT25 1732 aa22.27■■□□□ 1.16
SREBF1-207ENST00000447641 EFCAB2Q5VUJ9 269 aa22.27■■□□□ 1.16
SREBF1-207ENST00000447641 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
SREBF1-207ENST00000447641 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
SREBF1-207ENST00000447641 GPATCH8Q9UKJ3 1502 aaKnown RBP22.26■■□□□ 1.15
SREBF1-207ENST00000447641 KANK4Q5T7N3 995 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-207ENST00000447641 ATP10AO60312 1499 aa22.25■■□□□ 1.15
SREBF1-207ENST00000447641 MLECQ14165 292 aa22.24■■□□□ 1.15
SREBF1-207ENST00000447641 DIP2CQ9Y2E4 1556 aa22.23■■□□□ 1.15
SREBF1-207ENST00000447641 ARHGAP5Q13017 1502 aa22.22■■□□□ 1.15
SREBF1-207ENST00000447641 ABCA6Q8N139 1617 aa22.22■■□□□ 1.15
SREBF1-207ENST00000447641 SUPT6HQ7KZ85 1726 aaKnown RBP22.21■■□□□ 1.15
SREBF1-207ENST00000447641 CCNB3Q8WWL7 1395 aa22.2■■□□□ 1.14
SREBF1-207ENST00000447641 NCOA2Q15596 1464 aa22.2■■□□□ 1.14
SREBF1-207ENST00000447641 CERKQ8TCT0 537 aa22.19■■□□□ 1.14
SREBF1-207ENST00000447641 REREQ9P2R6 1566 aa22.19■■□□□ 1.14
SREBF1-207ENST00000447641 C3P01024 1663 aa22.19■■□□□ 1.14
SREBF1-207ENST00000447641 ZNF518AQ6AHZ1 1483 aa22.18■■□□□ 1.14
SREBF1-207ENST00000447641 APLP2Q06481 763 aa22.17■■□□□ 1.14
SREBF1-207ENST00000447641 ITSN2Q9NZM3 1697 aa22.14■■□□□ 1.14
SREBF1-207ENST00000447641 CEBPAP49715 358 aaPredicted RBP22.14■■□□□ 1.13
SREBF1-207ENST00000447641 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
SREBF1-207ENST00000447641 ABCC1P33527 1531 aa22.12■■□□□ 1.13
SREBF1-207ENST00000447641 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
SREBF1-207ENST00000447641 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
SREBF1-207ENST00000447641 KIDINS220Q9ULH0 1771 aa22.1■■□□□ 1.13
SREBF1-207ENST00000447641 KIAA1107Q9UPP5 1409 aa22.09■■□□□ 1.13
SREBF1-207ENST00000447641 UHRF1BP1Q6BDS2 1440 aa22.08■■□□□ 1.13
SREBF1-207ENST00000447641 AFAP1Q8N556 730 aa22.07■■□□□ 1.12
SREBF1-207ENST00000447641 ZNF777Q9ULD5 760 aaPredicted RBP22.07■■□□□ 1.12
SREBF1-207ENST00000447641 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
SREBF1-207ENST00000447641 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
SREBF1-207ENST00000447641 AGLP35573 1532 aa22.06■■□□□ 1.12
SREBF1-207ENST00000447641 TRAPPC8Q9Y2L5 1435 aa22.06■■□□□ 1.12
SREBF1-207ENST00000447641 ZNF644Q9H582 1327 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-207ENST00000447641 MYOM3Q5VTT5 1437 aa22.04■■□□□ 1.12
SREBF1-207ENST00000447641 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
SREBF1-207ENST00000447641 SYCP2Q9BX26 1530 aa22.02■■□□□ 1.12
SREBF1-207ENST00000447641 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.122e-8■■■□□ 16.1
SREBF1-207ENST00000447641 MIA2Q96PC5 1412 aa22.02■■□□□ 1.12
SREBF1-207ENST00000447641 MBD5Q9P267 1494 aa22.02■■□□□ 1.12
SREBF1-207ENST00000447641 MROH2AA6NES4 1674 aa21.99■■□□□ 1.11
SREBF1-207ENST00000447641 PTPRTO14522 1441 aa21.98■■□□□ 1.11
SREBF1-207ENST00000447641 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
SREBF1-207ENST00000447641 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
SREBF1-207ENST00000447641 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
SREBF1-207ENST00000447641 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
SREBF1-207ENST00000447641 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
SREBF1-207ENST00000447641 ARHGEF5Q12774 1597 aa21.92■■□□□ 1.1
SREBF1-207ENST00000447641 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
SREBF1-207ENST00000447641 DISP3Q9P2K9 1392 aa21.92■■□□□ 1.1
SREBF1-207ENST00000447641 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-207ENST00000447641 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
SREBF1-207ENST00000447641 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
SREBF1-207ENST00000447641 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
SREBF1-207ENST00000447641 CAMSAP1Q5T5Y3 1602 aa21.9■■□□□ 1.1
SREBF1-207ENST00000447641 INO80Q9ULG1 1556 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-207ENST00000447641 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
SREBF1-207ENST00000447641 MYO3AQ8NEV4 1616 aa21.89■■□□□ 1.09
SREBF1-207ENST00000447641 PTPN23Q9H3S7 1636 aa21.89■■□□□ 1.09
SREBF1-207ENST00000447641 IQSEC2Q5JU85 1478 aa21.89■■□□□ 1.09
SREBF1-207ENST00000447641 CCDC141Q6ZP82 1450 aa21.89■■□□□ 1.09
SREBF1-207ENST00000447641 CLTCQ00610 1675 aaKnown RBP21.88■■□□□ 1.09
SREBF1-207ENST00000447641 RTEL1-TNFRSF6BF6WH68 1400 aa21.88■■□□□ 1.09
SREBF1-207ENST00000447641 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
SREBF1-207ENST00000447641 ATP7AQ04656 1500 aa21.87■■□□□ 1.09
SREBF1-207ENST00000447641 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
SREBF1-207ENST00000447641 NPATQ14207 1427 aa21.84■■□□□ 1.09
SREBF1-207ENST00000447641 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
SREBF1-207ENST00000447641 MAST1Q9Y2H9 1570 aa21.81■■□□□ 1.08
SREBF1-207ENST00000447641 SOCS7O14512 581 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms