RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 NRG2O14511 850 aaPredicted RBP4.29□□□□□ -1.72
SNHG3-203ENST00000447507 VASPP50552 380 aaPredicted RBP4.29□□□□□ -1.72
SNHG3-203ENST00000447507 TREML4Q6UXN2 200 aa4.29□□□□□ -1.72
SNHG3-203ENST00000447507 KCTD12Q96CX2 325 aaKnown RBP4.29□□□□□ -1.72
SNHG3-203ENST00000447507 KRTAP4-8Q9BYQ9 185 aa4.29□□□□□ -1.72
SNHG3-203ENST00000447507 TK2O00142 265 aa4.28□□□□□ -1.72
SNHG3-203ENST00000447507 HRO43593 1189 aa4.28□□□□□ -1.72
SNHG3-203ENST00000447507 GSE1Q14687 1217 aa4.28□□□□□ -1.72
SNHG3-203ENST00000447507 KLHL34Q8N239 644 aa4.28□□□□□ -1.72
SNHG3-203ENST00000447507 MKRN3Q13064 507 aaKnown RBP4.27□□□□□ -1.73
SNHG3-203ENST00000447507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNHG3-203ENST00000447507 G3V3G9 751 aa4.26□□□□□ -1.73
SNHG3-203ENST00000447507 ZNF467Q7Z7K2 595 aaPredicted RBP4.26□□□□□ -1.73
SNHG3-203ENST00000447507 PCDHB8Q9UN66 801 aa4.26□□□□□ -1.73
SNHG3-203ENST00000447507 BOLA1Q9Y3E2 137 aa4.26□□□□□ -1.73
SNHG3-203ENST00000447507 INSM1Q01101 510 aaPredicted RBP4.23□□□□□ -1.73
SNHG3-203ENST00000447507 GOLGA2Q08379 1002 aa4.23□□□□□ -1.73
SNHG3-203ENST00000447507 AXIN2Q9Y2T1 843 aa4.23□□□□□ -1.73
SNHG3-203ENST00000447507 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
SNHG3-203ENST00000447507 CHRM1P11229 460 aaPredicted RBP4.22□□□□□ -1.73
SNHG3-203ENST00000447507 PTPN5P54829 565 aa4.22□□□□□ -1.73
SNHG3-203ENST00000447507 ARSIQ5FYB1 569 aa4.22□□□□□ -1.73
SNHG3-203ENST00000447507 PSEN1P49768 467 aa4.21□□□□□ -1.74
SNHG3-203ENST00000447507 SPOCK2Q92563 424 aa4.21□□□□□ -1.74
SNHG3-203ENST00000447507 ITGBL1O95965 494 aaPredicted RBP4.2□□□□□ -1.74
SNHG3-203ENST00000447507 KRTAP1-3Q8IUG1 177 aa4.2□□□□□ -1.74
SNHG3-203ENST00000447507 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
SNHG3-203ENST00000447507 ARHGAP33O14559 1287 aa4.19□□□□□ -1.74
SNHG3-203ENST00000447507 WIPF1O43516 503 aa4.19□□□□□ -1.74
SNHG3-203ENST00000447507 PDAP1Q13442 181 aaKnown RBP4.19□□□□□ -1.74
SNHG3-203ENST00000447507 DPY19L2Q6NUT2 758 aa4.19□□□□□ -1.74
SNHG3-203ENST00000447507 CIZ1Q9ULV3 898 aaPredicted RBP4.19□□□□□ -1.74
SNHG3-203ENST00000447507 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
SNHG3-203ENST00000447507 IFNLR1Q8IU57 520 aaPredicted RBP4.18□□□□□ -1.74
SNHG3-203ENST00000447507 STAC3Q96MF2 364 aa4.16□□□□□ -1.74
SNHG3-203ENST00000447507 CABP2Q9NPB3 220 aa4.16□□□□□ -1.74
SNHG3-203ENST00000447507 THSD4Q6ZMP0 1018 aa4.15□□□□□ -1.75
SNHG3-203ENST00000447507 TRIM41Q8WV44 630 aa4.15□□□□□ -1.75
SNHG3-203ENST00000447507 XP32Q5T750 250 aa4.13□□□□□ -1.75
SNHG3-203ENST00000447507 KHSRPQ92945 711 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNHG3-203ENST00000447507 TMEM92Q6UXU6 159 aa4.11□□□□□ -1.75
SNHG3-203ENST00000447507 FAM181BA6NEQ2 426 aa4.1□□□□□ -1.75
SNHG3-203ENST00000447507 WFS1O76024 890 aa4.1□□□□□ -1.75
SNHG3-203ENST00000447507 EFCAB3Q8N7B9 438 aa4.1□□□□□ -1.75
SNHG3-203ENST00000447507 DMRTA1Q5VZB9 504 aa4.09□□□□□ -1.75
SNHG3-203ENST00000447507 PSMG3-AS1Q96PY0 264 aa4.09□□□□□ -1.75
SNHG3-203ENST00000447507 ANO8Q9HCE9 1232 aaPredicted RBP4.09□□□□□ -1.75
SNHG3-203ENST00000447507 LHX6Q9UPM6 363 aa4.09□□□□□ -1.75
SNHG3-203ENST00000447507 PSDA5PKW4 1024 aaPredicted RBP4.08□□□□□ -1.76
SNHG3-203ENST00000447507 RIOK3O14730 519 aaKnown RBP4.08□□□□□ -1.76
SNHG3-203ENST00000447507 VGFO15240 615 aaPredicted RBP4.07□□□□□ -1.76
SNHG3-203ENST00000447507 MICALL2Q8IY33 904 aa4.07□□□□□ -1.76
SNHG3-203ENST00000447507 RNF25Q96BH1 459 aaPredicted RBP4.07□□□□□ -1.76
SNHG3-203ENST00000447507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.06□□□□□ -1.76
SNHG3-203ENST00000447507 POTECB2RU33 542 aa4.06□□□□□ -1.76
SNHG3-203ENST00000447507 SOX12O15370 315 aa4.06□□□□□ -1.76
SNHG3-203ENST00000447507 NUDT7P0C024 238 aa4.06□□□□□ -1.76
SNHG3-203ENST00000447507 ZFP91Q96JP5 570 aaPredicted RBP4.06□□□□□ -1.76
SNHG3-203ENST00000447507 V9GY48 417 aaPredicted RBP4.05□□□□□ -1.76
SNHG3-203ENST00000447507 MS4A4AQ96JQ5 239 aa4.04□□□□□ -1.76
SNHG3-203ENST00000447507 TAOK2Q9UL54 1235 aa4.04□□□□□ -1.76
SNHG3-203ENST00000447507 PHF8Q9UPP1 1060 aa4.04□□□□□ -1.76
SNHG3-203ENST00000447507 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
SNHG3-203ENST00000447507 PSEN2P49810 448 aa4.03□□□□□ -1.76
SNHG3-203ENST00000447507 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
SNHG3-203ENST00000447507 PDZRN3Q9UPQ7 1066 aa4.03□□□□□ -1.76
SNHG3-203ENST00000447507 KCNC4Q03721 635 aa4.02□□□□□ -1.77
SNHG3-203ENST00000447507 NFX1Q12986 1120 aaKnown RBP4.02□□□□□ -1.77
SNHG3-203ENST00000447507 PRKD2Q9BZL6 878 aa4.02□□□□□ -1.77
SNHG3-203ENST00000447507 BCL11BQ9C0K0 894 aaPredicted RBP4.02□□□□□ -1.77
SNHG3-203ENST00000447507 NLRP6P59044 892 aa4.01□□□□□ -1.77
SNHG3-203ENST00000447507 WNT2BQ93097 391 aa4.01□□□□□ -1.77
SNHG3-203ENST00000447507 MYT1Q01538 1121 aa4□□□□□ -1.77
SNHG3-203ENST00000447507 FBXO22Q8NEZ5 403 aa4□□□□□ -1.77
SNHG3-203ENST00000447507 VPS9D1Q9Y2B5 631 aa4□□□□□ -1.77
SNHG3-203ENST00000447507 STK24Q9Y6E0 443 aa4□□□□□ -1.77
SNHG3-203ENST00000447507 BTBD11A6QL63 1104 aa3.99□□□□□ -1.77
SNHG3-203ENST00000447507 STK25O00506 426 aa3.99□□□□□ -1.77
SNHG3-203ENST00000447507 BHMG1C9JSJ3 638 aaPredicted RBP3.98□□□□□ -1.77
SNHG3-203ENST00000447507 ECM2O94769 699 aaPredicted RBP3.98□□□□□ -1.77
SNHG3-203ENST00000447507 NYAP1Q6ZVC0 841 aa3.98□□□□□ -1.77
SNHG3-203ENST00000447507 SLC4A5Q9BY07 1137 aa3.98□□□□□ -1.77
SNHG3-203ENST00000447507 MFRPQ9BY79 579 aa3.98□□□□□ -1.77
SNHG3-203ENST00000447507 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
SNHG3-203ENST00000447507 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
SNHG3-203ENST00000447507 GOLGA8CPA6NN73 597 aa3.97□□□□□ -1.77
SNHG3-203ENST00000447507 DGAT1O75907 488 aa3.96□□□□□ -1.78
SNHG3-203ENST00000447507 C2orf72A6NCS6 295 aa3.95□□□□□ -1.78
SNHG3-203ENST00000447507 KIF3CO14782 793 aa3.95□□□□□ -1.78
SNHG3-203ENST00000447507 SLC34A2O95436 690 aa3.95□□□□□ -1.78
SNHG3-203ENST00000447507 RGL2O15211 777 aa3.94□□□□□ -1.78
SNHG3-203ENST00000447507 PKD2Q13563 968 aa3.94□□□□□ -1.78
SNHG3-203ENST00000447507 KCNH8Q96L42 1107 aa3.94□□□□□ -1.78
SNHG3-203ENST00000447507 PCDHGA4Q9Y5G9 962 aa3.94□□□□□ -1.78
SNHG3-203ENST00000447507 PKDCCQ504Y2 493 aa3.93□□□□□ -1.78
SNHG3-203ENST00000447507 TMC2Q8TDI7 906 aa3.93□□□□□ -1.78
SNHG3-203ENST00000447507 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
SNHG3-203ENST00000447507 LCE2CQ5TA81 110 aa3.92□□□□□ -1.78
SNHG3-203ENST00000447507 MRPL50Q8N5N7 158 aaKnown RBP3.92□□□□□ -1.78
SNHG3-203ENST00000447507 KCTD17Q8N5Z5 321 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms