RNA–Protein interactions for RNA: ENST00000446962.1

AL590648.3-201, humanhuman

TSL 3 BASIC

Gene AL590648.3, Length 473 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590648.3-201ENST00000446962 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
AL590648.3-201ENST00000446962 MLECQ14165 292 aa16.87■□□□□ 0.29
AL590648.3-201ENST00000446962 PTPRTO14522 1441 aa16.84■□□□□ 0.29
AL590648.3-201ENST00000446962 ATP10AO60312 1499 aa16.82■□□□□ 0.28
AL590648.3-201ENST00000446962 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
AL590648.3-201ENST00000446962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
AL590648.3-201ENST00000446962 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
AL590648.3-201ENST00000446962 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
AL590648.3-201ENST00000446962 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
AL590648.3-201ENST00000446962 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
AL590648.3-201ENST00000446962 SETD1BQ9UPS6 1966 aaKnown RBP16.79■□□□□ 0.28
AL590648.3-201ENST00000446962 PLEKHD1A6NEE1 506 aa16.79■□□□□ 0.28
AL590648.3-201ENST00000446962 PLCH2O75038 1416 aa16.79■□□□□ 0.28
AL590648.3-201ENST00000446962 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.27
AL590648.3-201ENST00000446962 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
AL590648.3-201ENST00000446962 C3P01024 1663 aa16.75■□□□□ 0.27
AL590648.3-201ENST00000446962 KDM5CP41229 1560 aa16.72■□□□□ 0.27
AL590648.3-201ENST00000446962 NCOA1Q15788 1441 aa16.72■□□□□ 0.27
AL590648.3-201ENST00000446962 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
AL590648.3-201ENST00000446962 REREQ9P2R6 1566 aa16.71■□□□□ 0.27
AL590648.3-201ENST00000446962 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
AL590648.3-201ENST00000446962 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
AL590648.3-201ENST00000446962 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
AL590648.3-201ENST00000446962 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
AL590648.3-201ENST00000446962 ABCA6Q8N139 1617 aa16.66■□□□□ 0.26
AL590648.3-201ENST00000446962 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
AL590648.3-201ENST00000446962 AGLP35573 1532 aa16.65■□□□□ 0.26
AL590648.3-201ENST00000446962 MYO5CQ9NQX4 1742 aa16.65■□□□□ 0.26
AL590648.3-201ENST00000446962 KIF14Q15058 1648 aa16.63■□□□□ 0.25
AL590648.3-201ENST00000446962 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
AL590648.3-201ENST00000446962 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
AL590648.3-201ENST00000446962 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
AL590648.3-201ENST00000446962 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
AL590648.3-201ENST00000446962 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
AL590648.3-201ENST00000446962 MED1Q15648 1581 aaPredicted RBP16.57■□□□□ 0.24
AL590648.3-201ENST00000446962 UBAP1LF5GYI3 381 aa16.57■□□□□ 0.24
AL590648.3-201ENST00000446962 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
AL590648.3-201ENST00000446962 NCKAP5LQ9HCH0 1330 aa16.56■□□□□ 0.24
AL590648.3-201ENST00000446962 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
AL590648.3-201ENST00000446962 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
AL590648.3-201ENST00000446962 NPATQ14207 1427 aa16.55■□□□□ 0.24
AL590648.3-201ENST00000446962 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
AL590648.3-201ENST00000446962 ARHGAP5Q13017 1502 aa16.53■□□□□ 0.24
AL590648.3-201ENST00000446962 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
AL590648.3-201ENST00000446962 ABCC1P33527 1531 aa16.52■□□□□ 0.24
AL590648.3-201ENST00000446962 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
AL590648.3-201ENST00000446962 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
AL590648.3-201ENST00000446962 PLA2R1Q13018 1463 aa16.51■□□□□ 0.23
AL590648.3-201ENST00000446962 HSPA1LP34931 641 aa16.51■□□□□ 0.23
AL590648.3-201ENST00000446962 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
AL590648.3-201ENST00000446962 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
AL590648.3-201ENST00000446962 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
AL590648.3-201ENST00000446962 ALKQ9UM73 1620 aa16.49■□□□□ 0.23
AL590648.3-201ENST00000446962 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
AL590648.3-201ENST00000446962 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
AL590648.3-201ENST00000446962 PKD2Q13563 968 aa16.46■□□□□ 0.23
AL590648.3-201ENST00000446962 CEP170BQ9Y4F5 1589 aaPredicted RBP16.46■□□□□ 0.23
AL590648.3-201ENST00000446962 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
AL590648.3-201ENST00000446962 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
AL590648.3-201ENST00000446962 EEA1Q15075 1411 aa16.44■□□□□ 0.22
AL590648.3-201ENST00000446962 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
AL590648.3-201ENST00000446962 ESF1Q9H501 851 aaKnown RBP16.43■□□□□ 0.22
AL590648.3-201ENST00000446962 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
AL590648.3-201ENST00000446962 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
AL590648.3-201ENST00000446962 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
AL590648.3-201ENST00000446962 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
AL590648.3-201ENST00000446962 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
AL590648.3-201ENST00000446962 NEURL4Q96JN8 1562 aa16.41■□□□□ 0.22
AL590648.3-201ENST00000446962 CDC42BPAQ5VT25 1732 aa16.4■□□□□ 0.22
AL590648.3-201ENST00000446962 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
AL590648.3-201ENST00000446962 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
AL590648.3-201ENST00000446962 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
AL590648.3-201ENST00000446962 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
AL590648.3-201ENST00000446962 ATP1B4Q9UN42 357 aaPredicted RBP16.37■□□□□ 0.21
AL590648.3-201ENST00000446962 CLIP1P30622 1438 aa16.36■□□□□ 0.21
AL590648.3-201ENST00000446962 CPS1P31327 1500 aa16.36■□□□□ 0.21
AL590648.3-201ENST00000446962 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
AL590648.3-201ENST00000446962 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
AL590648.3-201ENST00000446962 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
AL590648.3-201ENST00000446962 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
AL590648.3-201ENST00000446962 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
AL590648.3-201ENST00000446962 POLR1AO95602 1720 aaPredicted RBP16.33■□□□□ 0.2
AL590648.3-201ENST00000446962 TOM1O60784 492 aa16.32■□□□□ 0.2
AL590648.3-201ENST00000446962 SYCP2Q9BX26 1530 aa16.32■□□□□ 0.2
AL590648.3-201ENST00000446962 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
AL590648.3-201ENST00000446962 A2MP01023 1474 aa16.3■□□□□ 0.2
AL590648.3-201ENST00000446962 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
AL590648.3-201ENST00000446962 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
AL590648.3-201ENST00000446962 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
AL590648.3-201ENST00000446962 SPAG9O60271 1321 aaKnown RBP16.29■□□□□ 0.2
AL590648.3-201ENST00000446962 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
AL590648.3-201ENST00000446962 MED14O60244 1454 aa16.26■□□□□ 0.19
AL590648.3-201ENST00000446962 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
AL590648.3-201ENST00000446962 GGT6Q6P531 493 aa16.25■□□□□ 0.19
AL590648.3-201ENST00000446962 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
AL590648.3-201ENST00000446962 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
AL590648.3-201ENST00000446962 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
AL590648.3-201ENST00000446962 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
AL590648.3-201ENST00000446962 LRRC7Q96NW7 1537 aa16.23■□□□□ 0.19
AL590648.3-201ENST00000446962 DEPDC5O75140 1603 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms