RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
LIN54-203ENST00000446851 FANCAO15360 1455 aa15.36■□□□□ 0.05
LIN54-203ENST00000446851 KIF3BO15066 747 aa15.33■□□□□ 0.05
LIN54-203ENST00000446851 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
LIN54-203ENST00000446851 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
LIN54-203ENST00000446851 ADGRL1O94910 1474 aa15.31■□□□□ 0.04
LIN54-203ENST00000446851 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
LIN54-203ENST00000446851 AKNAQ7Z591 1439 aa15.31■□□□□ 0.04
LIN54-203ENST00000446851 KIF14Q15058 1648 aa15.31■□□□□ 0.04
LIN54-203ENST00000446851 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
LIN54-203ENST00000446851 PLCH2O75038 1416 aa15.28■□□□□ 0.04
LIN54-203ENST00000446851 TEX14Q8IWB6 1497 aa15.28■□□□□ 0.04
LIN54-203ENST00000446851 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
LIN54-203ENST00000446851 EHBP1L1Q8N3D4 1523 aa15.27■□□□□ 0.04
LIN54-203ENST00000446851 GPATCH8Q9UKJ3 1502 aaKnown RBP15.26■□□□□ 0.03
LIN54-203ENST00000446851 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
LIN54-203ENST00000446851 MAPKBP1O60336 1514 aa15.26■□□□□ 0.03
LIN54-203ENST00000446851 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIN54-203ENST00000446851 DENND4BO75064 1496 aaPredicted RBP15.25■□□□□ 0.03
LIN54-203ENST00000446851 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
LIN54-203ENST00000446851 RSPH4AQ5TD94 716 aa15.22■□□□□ 0.03
LIN54-203ENST00000446851 TTC37Q6PGP7 1564 aa15.21■□□□□ 0.03
LIN54-203ENST00000446851 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
LIN54-203ENST00000446851 TRAPPC8Q9Y2L5 1435 aa15.21■□□□□ 0.03
LIN54-203ENST00000446851 DIP2BQ9P265 1576 aa15.21■□□□□ 0.03
LIN54-203ENST00000446851 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
LIN54-203ENST00000446851 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
LIN54-203ENST00000446851 BCANQ96GW7 911 aa15.19■□□□□ 0.02
LIN54-203ENST00000446851 CEBPAP49715 358 aaPredicted RBP15.18■□□□□ 0.02
LIN54-203ENST00000446851 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
LIN54-203ENST00000446851 ANKRD30AQ9BXX3 1397 aa15.16■□□□□ 0.02
LIN54-203ENST00000446851 COL17A1Q9UMD9 1497 aaPredicted RBP15.16■□□□□ 0.02
LIN54-203ENST00000446851 SYCP2Q9BX26 1530 aa15.15■□□□□ 0.02
LIN54-203ENST00000446851 CAMSAP2Q08AD1 1489 aa15.15■□□□□ 0.02
LIN54-203ENST00000446851 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
LIN54-203ENST00000446851 KDM6BO15054 1643 aa15.14■□□□□ 0.01
LIN54-203ENST00000446851 KIF15Q9NS87 1388 aa15.14■□□□□ 0.01
LIN54-203ENST00000446851 FOXD1Q16676 465 aa15.14■□□□□ 0.01
LIN54-203ENST00000446851 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
LIN54-203ENST00000446851 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
LIN54-203ENST00000446851 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
LIN54-203ENST00000446851 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
LIN54-203ENST00000446851 MIA2Q96PC5 1412 aa15.1■□□□□ 0.01
LIN54-203ENST00000446851 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
LIN54-203ENST00000446851 NEO1Q92859 1461 aa15.09■□□□□ 0.01
LIN54-203ENST00000446851 ZNF518AQ6AHZ1 1483 aa15.09■□□□□ 0.01
LIN54-203ENST00000446851 NUP155O75694 1391 aa15.08■□□□□ 0.01
LIN54-203ENST00000446851 MAP3K1Q13233 1512 aa15.08■□□□□ 0
LIN54-203ENST00000446851 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
LIN54-203ENST00000446851 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
LIN54-203ENST00000446851 CFAP43Q8NDM7 1665 aa15.06■□□□□ 0
LIN54-203ENST00000446851 ABCC5O15440 1437 aa15.06■□□□□ 0
LIN54-203ENST00000446851 MYO5CQ9NQX4 1742 aa15.06■□□□□ 0
LIN54-203ENST00000446851 RGL3Q3MIN7 710 aa15.06■□□□□ 0
LIN54-203ENST00000446851 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
LIN54-203ENST00000446851 DAPK1P53355 1430 aa15.06■□□□□ 0
LIN54-203ENST00000446851 POGZQ7Z3K3 1410 aa15.06■□□□□ 0
LIN54-203ENST00000446851 ARHGEF12Q9NZN5 1544 aa15.05■□□□□ 0
LIN54-203ENST00000446851 KANK1Q14678 1352 aa15.05■□□□□ 0
LIN54-203ENST00000446851 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
LIN54-203ENST00000446851 NUTM2DQ5VT03 806 aaPredicted RBP15.03■□□□□ -0
LIN54-203ENST00000446851 KIF13AQ9H1H9 1805 aa15.03■□□□□ -0
LIN54-203ENST00000446851 FBXO31Q5XUX0 539 aaPredicted RBP15.02■□□□□ -0
LIN54-203ENST00000446851 PKD2Q13563 968 aa15.02■□□□□ -0
LIN54-203ENST00000446851 GLI2P10070 1586 aa15.01□□□□□ -0.01
LIN54-203ENST00000446851 ANKRD50Q9ULJ7 1429 aa15.01□□□□□ -0.01
LIN54-203ENST00000446851 KIAA1107Q9UPP5 1409 aa15.01□□□□□ -0.01
LIN54-203ENST00000446851 SAMD9LQ8IVG5 1584 aa15□□□□□ -0.01
LIN54-203ENST00000446851 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
LIN54-203ENST00000446851 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
LIN54-203ENST00000446851 HSPA2P54652 639 aa14.98□□□□□ -0.01
LIN54-203ENST00000446851 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
LIN54-203ENST00000446851 ITSN2Q9NZM3 1697 aa14.98□□□□□ -0.01
LIN54-203ENST00000446851 CDC42BPAQ5VT25 1732 aa14.98□□□□□ -0.01
LIN54-203ENST00000446851 DHX29Q7Z478 1369 aaKnown RBP14.97□□□□□ -0.01
LIN54-203ENST00000446851 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
LIN54-203ENST00000446851 A2MP01023 1474 aa14.97□□□□□ -0.01
LIN54-203ENST00000446851 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
LIN54-203ENST00000446851 PREX2Q70Z35 1606 aa14.97□□□□□ -0.01
LIN54-203ENST00000446851 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.01
LIN54-203ENST00000446851 ATP10AO60312 1499 aa14.96□□□□□ -0.01
LIN54-203ENST00000446851 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
LIN54-203ENST00000446851 ZFYVE16Q7Z3T8 1539 aa14.96□□□□□ -0.01
LIN54-203ENST00000446851 RRBP1Q9P2E9 1410 aaKnown RBP14.95□□□□□ -0.02
LIN54-203ENST00000446851 NCOA1Q15788 1441 aa14.95□□□□□ -0.02
LIN54-203ENST00000446851 ABCC1P33527 1531 aa14.95□□□□□ -0.02
LIN54-203ENST00000446851 MPHOSPH9Q99550 1183 aa14.94□□□□□ -0.02
LIN54-203ENST00000446851 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
LIN54-203ENST00000446851 ARAP3Q8WWN8 1544 aa14.93□□□□□ -0.02
LIN54-203ENST00000446851 ATP7AQ04656 1500 aa14.92□□□□□ -0.02
LIN54-203ENST00000446851 KDM4FA0A1W2PPD8 638 aa14.91□□□□□ -0.02
LIN54-203ENST00000446851 CFAP74Q9C0B2 1584 aa14.91□□□□□ -0.02
LIN54-203ENST00000446851 SIN3AQ96ST3 1273 aa14.9□□□□□ -0.02
LIN54-203ENST00000446851 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
LIN54-203ENST00000446851 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
LIN54-203ENST00000446851 NAIPQ13075 1403 aa14.85□□□□□ -0.03
LIN54-203ENST00000446851 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
LIN54-203ENST00000446851 RTEL1-TNFRSF6BF6WH68 1400 aa14.84□□□□□ -0.03
LIN54-203ENST00000446851 TCOF1Q13428 1488 aaKnown RBP14.84□□□□□ -0.03
LIN54-203ENST00000446851 MAGI2Q86UL8 1455 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms