RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 CROCC2H7BZ55 1655 aa22.88■■□□□ 1.25
SNX13-204ENST00000444712 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
SNX13-204ENST00000444712 ABCC5O15440 1437 aa22.86■■□□□ 1.25
SNX13-204ENST00000444712 UHRF1BP1LA0JNW5 1464 aa22.85■■□□□ 1.25
SNX13-204ENST00000444712 TIMELESSQ9UNS1 1208 aa22.84■■□□□ 1.25
SNX13-204ENST00000444712 PREX2Q70Z35 1606 aa22.81■■□□□ 1.24
SNX13-204ENST00000444712 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
SNX13-204ENST00000444712 RRP7BPQ9NSQ0 103 aa22.79■■□□□ 1.24
SNX13-204ENST00000444712 ADGRL2O95490 1459 aa22.78■■□□□ 1.24
SNX13-204ENST00000444712 ZCCHC11Q5TAX3 1644 aaKnown RBP22.77■■□□□ 1.24
SNX13-204ENST00000444712 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
SNX13-204ENST00000444712 SHANK2Q9UPX8 1470 aa22.77■■□□□ 1.24
SNX13-204ENST00000444712 ZNF644Q9H582 1327 aaPredicted RBP22.76■■□□□ 1.23
SNX13-204ENST00000444712 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
SNX13-204ENST00000444712 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
SNX13-204ENST00000444712 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
SNX13-204ENST00000444712 KDM5BQ9UGL1 1544 aa22.74■■□□□ 1.23
SNX13-204ENST00000444712 KDM6BO15054 1643 aa22.74■■□□□ 1.23
SNX13-204ENST00000444712 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.23
SNX13-204ENST00000444712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.22
SNX13-204ENST00000444712 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
SNX13-204ENST00000444712 ANKRD30AQ9BXX3 1397 aa22.69■■□□□ 1.22
SNX13-204ENST00000444712 NCOA1Q15788 1441 aa22.69■■□□□ 1.22
SNX13-204ENST00000444712 SAMD9LQ8IVG5 1584 aa22.67■■□□□ 1.22
SNX13-204ENST00000444712 SIN3AQ96ST3 1273 aa22.66■■□□□ 1.22
SNX13-204ENST00000444712 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
SNX13-204ENST00000444712 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
SNX13-204ENST00000444712 RSPH4AQ5TD94 716 aa22.64■■□□□ 1.22
SNX13-204ENST00000444712 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
SNX13-204ENST00000444712 ARHGAP5Q13017 1502 aa22.63■■□□□ 1.21
SNX13-204ENST00000444712 C9orf84Q5VXU9 1444 aa22.63■■□□□ 1.21
SNX13-204ENST00000444712 CCDC141Q6ZP82 1450 aa22.62■■□□□ 1.21
SNX13-204ENST00000444712 TONSLQ96HA7 1378 aa22.62■■□□□ 1.21
SNX13-204ENST00000444712 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
SNX13-204ENST00000444712 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
SNX13-204ENST00000444712 TSPY4P0CV99 314 aa22.6■■□□□ 1.21
SNX13-204ENST00000444712 TSPY10P0CW01 314 aa22.6■■□□□ 1.21
SNX13-204ENST00000444712 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
SNX13-204ENST00000444712 DENND4BO75064 1496 aaPredicted RBP22.59■■□□□ 1.21
SNX13-204ENST00000444712 MPHOSPH9Q99550 1183 aa22.58■■□□□ 1.21
SNX13-204ENST00000444712 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
SNX13-204ENST00000444712 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
SNX13-204ENST00000444712 ANKRD50Q9ULJ7 1429 aa22.55■■□□□ 1.2
SNX13-204ENST00000444712 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
SNX13-204ENST00000444712 PPP1R15AO75807 674 aaPredicted RBP22.54■■□□□ 1.2
SNX13-204ENST00000444712 PLCH2O75038 1416 aa22.54■■□□□ 1.2
SNX13-204ENST00000444712 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
SNX13-204ENST00000444712 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
SNX13-204ENST00000444712 HNRNPMP52272 730 aaKnown RBP eCLIP22.5■■□□□ 1.198e-7■■■■■ 42.1
SNX13-204ENST00000444712 KDM5DQ9BY66 1539 aa22.5■■□□□ 1.19
SNX13-204ENST00000444712 PZPP20742 1482 aa22.49■■□□□ 1.19
SNX13-204ENST00000444712 KCNH8Q96L42 1107 aa22.48■■□□□ 1.19
SNX13-204ENST00000444712 KIF15Q9NS87 1388 aa22.48■■□□□ 1.19
SNX13-204ENST00000444712 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
SNX13-204ENST00000444712 ABCA9Q8IUA7 1624 aa22.47■■□□□ 1.19
SNX13-204ENST00000444712 ABCC1P33527 1531 aa22.47■■□□□ 1.19
SNX13-204ENST00000444712 EFCAB2Q5VUJ9 269 aa22.47■■□□□ 1.19
SNX13-204ENST00000444712 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
SNX13-204ENST00000444712 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
SNX13-204ENST00000444712 UNC13BO14795 1591 aa22.39■■□□□ 1.17
SNX13-204ENST00000444712 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
SNX13-204ENST00000444712 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
SNX13-204ENST00000444712 ARHGEF12Q9NZN5 1544 aa22.37■■□□□ 1.17
SNX13-204ENST00000444712 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNX13-204ENST00000444712 NUP155O75694 1391 aa22.36■■□□□ 1.17
SNX13-204ENST00000444712 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
SNX13-204ENST00000444712 FOXD1Q16676 465 aa22.33■■□□□ 1.16
SNX13-204ENST00000444712 RTEL1-TNFRSF6BF6WH68 1400 aa22.33■■□□□ 1.16
SNX13-204ENST00000444712 TEX14Q8IWB6 1497 aa22.33■■□□□ 1.16
SNX13-204ENST00000444712 CFAP74Q9C0B2 1584 aa22.32■■□□□ 1.16
SNX13-204ENST00000444712 FANCAO15360 1455 aa22.31■■□□□ 1.16
SNX13-204ENST00000444712 PKD2Q13563 968 aa22.31■■□□□ 1.16
SNX13-204ENST00000444712 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
SNX13-204ENST00000444712 IQGAP3Q86VI3 1631 aa22.3■■□□□ 1.16
SNX13-204ENST00000444712 MIER1Q8N108 512 aa22.28■■□□□ 1.16
SNX13-204ENST00000444712 TRAPPC8Q9Y2L5 1435 aa22.28■■□□□ 1.16
SNX13-204ENST00000444712 ZFYVE16Q7Z3T8 1539 aa22.27■■□□□ 1.16
SNX13-204ENST00000444712 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.15
SNX13-204ENST00000444712 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
SNX13-204ENST00000444712 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
SNX13-204ENST00000444712 ADGRL1O94910 1474 aa22.23■■□□□ 1.15
SNX13-204ENST00000444712 SPAG9O60271 1321 aaKnown RBP22.23■■□□□ 1.15
SNX13-204ENST00000444712 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
SNX13-204ENST00000444712 CENPBP07199 599 aaPredicted RBP22.19■■□□□ 1.14
SNX13-204ENST00000444712 EIF2AK4Q9P2K8 1649 aaKnown RBP22.18■■□□□ 1.14
SNX13-204ENST00000444712 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
SNX13-204ENST00000444712 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
SNX13-204ENST00000444712 CD109Q6YHK3 1445 aa22.15■■□□□ 1.14
SNX13-204ENST00000444712 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.14
SNX13-204ENST00000444712 ZNF518AQ6AHZ1 1483 aa22.14■■□□□ 1.13
SNX13-204ENST00000444712 AFAP1Q8N556 730 aa22.12■■□□□ 1.13
SNX13-204ENST00000444712 RIMBP3CA6NJZ7 1639 aa22.12■■□□□ 1.13
SNX13-204ENST00000444712 RIMBP3BA6NNM3 1639 aa22.12■■□□□ 1.13
SNX13-204ENST00000444712 RIMBP3Q9UFD9 1639 aa22.12■■□□□ 1.13
SNX13-204ENST00000444712 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
SNX13-204ENST00000444712 ATP10AO60312 1499 aa22.11■■□□□ 1.13
SNX13-204ENST00000444712 UHRF1BP1Q6BDS2 1440 aa22.11■■□□□ 1.13
SNX13-204ENST00000444712 CCDC144AA2RUR9 1427 aa22.1■■□□□ 1.13
SNX13-204ENST00000444712 KIDINS220Q9ULH0 1771 aa22.09■■□□□ 1.13
SNX13-204ENST00000444712 NEO1Q92859 1461 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms