RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 RAPGEF3O95398 923 aa26.59■■□□□ 1.85
SHC1-209ENST00000444664 ADGRL1O94910 1474 aa26.57■■□□□ 1.84
SHC1-209ENST00000444664 DENND4BO75064 1496 aaPredicted RBP26.56■■□□□ 1.84
SHC1-209ENST00000444664 EFCAB2Q5VUJ9 269 aa26.56■■□□□ 1.84
SHC1-209ENST00000444664 SCAPERQ9BY12 1400 aa26.52■■□□□ 1.84
SHC1-209ENST00000444664 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
SHC1-209ENST00000444664 SUPT6HQ7KZ85 1726 aaKnown RBP26.49■■□□□ 1.83
SHC1-209ENST00000444664 MAP3K1Q13233 1512 aa26.48■■□□□ 1.83
SHC1-209ENST00000444664 POGZQ7Z3K3 1410 aa26.47■■□□□ 1.83
SHC1-209ENST00000444664 CCNB3Q8WWL7 1395 aa26.47■■□□□ 1.83
SHC1-209ENST00000444664 LRRC9Q6ZRR7 1453 aa26.47■■□□□ 1.83
SHC1-209ENST00000444664 ABCC1P33527 1531 aa26.45■■□□□ 1.83
SHC1-209ENST00000444664 ZMYM4Q5VZL5 1548 aa26.45■■□□□ 1.83
SHC1-209ENST00000444664 ITSN2Q9NZM3 1697 aa26.44■■□□□ 1.82
SHC1-209ENST00000444664 SAMD9LQ8IVG5 1584 aa26.44■■□□□ 1.82
SHC1-209ENST00000444664 NCOA2Q15596 1464 aa26.43■■□□□ 1.82
SHC1-209ENST00000444664 KANK4Q5T7N3 995 aaPredicted RBP26.42■■□□□ 1.82
SHC1-209ENST00000444664 ARHGEF40Q8TER5 1519 aa26.41■■□□□ 1.82
SHC1-209ENST00000444664 ARHGEF12Q9NZN5 1544 aa26.41■■□□□ 1.82
SHC1-209ENST00000444664 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
SHC1-209ENST00000444664 ZNF518AQ6AHZ1 1483 aa26.38■■□□□ 1.81
SHC1-209ENST00000444664 CFDP1Q9UEE9 299 aaPredicted RBP26.38■■□□□ 1.81
SHC1-209ENST00000444664 ZFYVE16Q7Z3T8 1539 aa26.37■■□□□ 1.81
SHC1-209ENST00000444664 KDM5CP41229 1560 aa26.37■■□□□ 1.81
SHC1-209ENST00000444664 KDM4FA0A1W2PPD8 638 aa26.37■■□□□ 1.81
SHC1-209ENST00000444664 SYCP2Q9BX26 1530 aa26.36■■□□□ 1.81
SHC1-209ENST00000444664 YEATS2Q9ULM3 1422 aa26.36■■□□□ 1.81
SHC1-209ENST00000444664 APLP2Q06481 763 aa26.36■■□□□ 1.81
SHC1-209ENST00000444664 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
SHC1-209ENST00000444664 AFAP1Q8N556 730 aa26.35■■□□□ 1.81
SHC1-209ENST00000444664 MAGI2Q86UL8 1455 aa26.34■■□□□ 1.81
SHC1-209ENST00000444664 HECW2Q9P2P5 1572 aa26.31■■□□□ 1.8
SHC1-209ENST00000444664 PLEKHH2Q8IVE3 1493 aa26.3■■□□□ 1.8
SHC1-209ENST00000444664 ZNF644Q9H582 1327 aaPredicted RBP26.3■■□□□ 1.8
SHC1-209ENST00000444664 SIGLEC1Q9BZZ2 1709 aa26.29■■□□□ 1.8
SHC1-209ENST00000444664 HNRNPMP52272 730 aaKnown RBP eCLIP26.28■■□□□ 1.8
SHC1-209ENST00000444664 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
SHC1-209ENST00000444664 KIAA1107Q9UPP5 1409 aa26.28■■□□□ 1.8
SHC1-209ENST00000444664 KIDINS220Q9ULH0 1771 aa26.25■■□□□ 1.79
SHC1-209ENST00000444664 ABCA6Q8N139 1617 aa26.24■■□□□ 1.79
SHC1-209ENST00000444664 CAMSAP2Q08AD1 1489 aa26.24■■□□□ 1.79
SHC1-209ENST00000444664 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
SHC1-209ENST00000444664 MYT1LQ9UL68 1186 aa26.24■■□□□ 1.79
SHC1-209ENST00000444664 DIP2CQ9Y2E4 1556 aa26.24■■□□□ 1.79
SHC1-209ENST00000444664 ATP10AO60312 1499 aa26.22■■□□□ 1.79
SHC1-209ENST00000444664 BCORL1Q5H9F3 1711 aa26.22■■□□□ 1.79
SHC1-209ENST00000444664 ARID4BQ4LE39 1312 aaPredicted RBP26.21■■□□□ 1.79
SHC1-209ENST00000444664 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
SHC1-209ENST00000444664 MBD5Q9P267 1494 aa26.2■■□□□ 1.78
SHC1-209ENST00000444664 C9orf84Q5VXU9 1444 aa26.19■■□□□ 1.78
SHC1-209ENST00000444664 ADAMTSL3P82987 1691 aa26.19■■□□□ 1.78
SHC1-209ENST00000444664 INO80Q9ULG1 1556 aaPredicted RBP26.17■■□□□ 1.78
SHC1-209ENST00000444664 SPAG9O60271 1321 aaKnown RBP26.17■■□□□ 1.78
SHC1-209ENST00000444664 ATP7AQ04656 1500 aa26.16■■□□□ 1.78
SHC1-209ENST00000444664 MIA2Q96PC5 1412 aa26.14■■□□□ 1.77
SHC1-209ENST00000444664 REREQ9P2R6 1566 aa26.13■■□□□ 1.77
SHC1-209ENST00000444664 MADDQ8WXG6 1647 aa26.12■■□□□ 1.77
SHC1-209ENST00000444664 CCDC141Q6ZP82 1450 aa26.12■■□□□ 1.77
SHC1-209ENST00000444664 ARHGEF5Q12774 1597 aa26.11■■□□□ 1.77
SHC1-209ENST00000444664 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
SHC1-209ENST00000444664 MLECQ14165 292 aa26.07■■□□□ 1.76
SHC1-209ENST00000444664 FGD6Q6ZV73 1430 aa26.06■■□□□ 1.76
SHC1-209ENST00000444664 RIMS1Q86UR5 1692 aaKnown RBP26.06■■□□□ 1.76
SHC1-209ENST00000444664 ADGBQ8N7X0 1667 aa26.04■■□□□ 1.76
SHC1-209ENST00000444664 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
SHC1-209ENST00000444664 AGLP35573 1532 aa26.03■■□□□ 1.76
SHC1-209ENST00000444664 RTEL1-TNFRSF6BF6WH68 1400 aa26.03■■□□□ 1.76
SHC1-209ENST00000444664 RSPH4AQ5TD94 716 aa26.02■■□□□ 1.76
SHC1-209ENST00000444664 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
SHC1-209ENST00000444664 PLXNC1O60486 1568 aa26■■□□□ 1.75
SHC1-209ENST00000444664 A2MP01023 1474 aa26■■□□□ 1.75
SHC1-209ENST00000444664 PTPRMP28827 1452 aa26■■□□□ 1.75
SHC1-209ENST00000444664 TCOF1Q13428 1488 aaKnown RBP26■■□□□ 1.75
SHC1-209ENST00000444664 CROCC2H7BZ55 1655 aa25.98■■□□□ 1.75
SHC1-209ENST00000444664 MAST1Q9Y2H9 1570 aa25.98■■□□□ 1.75
SHC1-209ENST00000444664 TSPY4P0CV99 314 aa25.96■■□□□ 1.75
SHC1-209ENST00000444664 TSPY10P0CW01 314 aa25.96■■□□□ 1.75
SHC1-209ENST00000444664 DNMT1P26358 1616 aaKnown RBP25.95■■□□□ 1.74
SHC1-209ENST00000444664 ABCC5O15440 1437 aa25.92■■□□□ 1.74
SHC1-209ENST00000444664 DAPK1P53355 1430 aa25.91■■□□□ 1.74
SHC1-209ENST00000444664 DHX29Q7Z478 1369 aaKnown RBP25.89■■□□□ 1.74
SHC1-209ENST00000444664 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.73
SHC1-209ENST00000444664 FAM50AQ14320 339 aaKnown RBP25.88■■□□□ 1.73
SHC1-209ENST00000444664 PLPPR3Q6T4P5 718 aa25.87■■□□□ 1.73
SHC1-209ENST00000444664 C3P01024 1663 aa25.81■■□□□ 1.72
SHC1-209ENST00000444664 GGT6Q6P531 493 aa25.81■■□□□ 1.72
SHC1-209ENST00000444664 CLTCQ00610 1675 aaKnown RBP25.8■■□□□ 1.72
SHC1-209ENST00000444664 KIF3BO15066 747 aa25.79■■□□□ 1.72
SHC1-209ENST00000444664 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
SHC1-209ENST00000444664 ESF1Q9H501 851 aaKnown RBP25.79■■□□□ 1.72
SHC1-209ENST00000444664 CHIC2Q9UKJ5 165 aa25.79■■□□□ 1.72
SHC1-209ENST00000444664 MROH2AA6NES4 1674 aa25.78■■□□□ 1.72
SHC1-209ENST00000444664 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
SHC1-209ENST00000444664 CNTLNQ9NXG0 1405 aa25.77■■□□□ 1.72
SHC1-209ENST00000444664 DUOX2Q9NRD8 1548 aa25.77■■□□□ 1.72
SHC1-209ENST00000444664 EIF2AK4Q9P2K8 1649 aaKnown RBP25.76■■□□□ 1.71
SHC1-209ENST00000444664 RRP7BPQ9NSQ0 103 aa25.75■■□□□ 1.71
SHC1-209ENST00000444664 RNF17Q9BXT8 1623 aaKnown RBP25.74■■□□□ 1.71
SHC1-209ENST00000444664 ADGRL2O95490 1459 aa25.73■■□□□ 1.71
SHC1-209ENST00000444664 ANKRD30AQ9BXX3 1397 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms