RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
TOP3B-210ENST00000444502 TIAM1Q13009 1591 aa14.29□□□□□ -0.12
TOP3B-210ENST00000444502 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
TOP3B-210ENST00000444502 KIF3BO15066 747 aa14.27□□□□□ -0.12
TOP3B-210ENST00000444502 ABCA10Q8WWZ4 1543 aa14.27□□□□□ -0.12
TOP3B-210ENST00000444502 NEFMP07197 916 aa14.27□□□□□ -0.12
TOP3B-210ENST00000444502 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
TOP3B-210ENST00000444502 MYOM3Q5VTT5 1437 aa14.26□□□□□ -0.13
TOP3B-210ENST00000444502 NCOA2Q15596 1464 aa14.26□□□□□ -0.13
TOP3B-210ENST00000444502 FYCO1Q9BQS8 1478 aa14.24□□□□□ -0.13
TOP3B-210ENST00000444502 NUP155O75694 1391 aa14.24□□□□□ -0.13
TOP3B-210ENST00000444502 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
TOP3B-210ENST00000444502 GRIN2BQ13224 1484 aa14.23□□□□□ -0.13
TOP3B-210ENST00000444502 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
TOP3B-210ENST00000444502 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
TOP3B-210ENST00000444502 SPAG9O60271 1321 aaKnown RBP14.21□□□□□ -0.13
TOP3B-210ENST00000444502 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
TOP3B-210ENST00000444502 CANXP27824 592 aaKnown RBP14.21□□□□□ -0.13
TOP3B-210ENST00000444502 PCF11O94913 1555 aaKnown RBP14.21□□□□□ -0.14
TOP3B-210ENST00000444502 NUTM2DQ5VT03 806 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-210ENST00000444502 EFCAB5A4FU69 1503 aa14.18□□□□□ -0.14
TOP3B-210ENST00000444502 UACAQ9BZF9 1416 aa14.17□□□□□ -0.14
TOP3B-210ENST00000444502 ANKRD30AQ9BXX3 1397 aa14.17□□□□□ -0.14
TOP3B-210ENST00000444502 KANK1Q14678 1352 aa14.16□□□□□ -0.14
TOP3B-210ENST00000444502 POGKQ9P215 609 aa14.16□□□□□ -0.14
TOP3B-210ENST00000444502 STK26Q9P289 416 aa14.16□□□□□ -0.14
TOP3B-210ENST00000444502 PPM1GO15355 546 aaPredicted RBP14.15□□□□□ -0.14
TOP3B-210ENST00000444502 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
TOP3B-210ENST00000444502 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
TOP3B-210ENST00000444502 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
TOP3B-210ENST00000444502 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
TOP3B-210ENST00000444502 PRG4Q92954 1404 aaPredicted RBP14.14□□□□□ -0.15
TOP3B-210ENST00000444502 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
TOP3B-210ENST00000444502 LMOD2Q6P5Q4 547 aa14.12□□□□□ -0.15
TOP3B-210ENST00000444502 WASHC2CQ9Y4E1 1318 aa14.12□□□□□ -0.15
TOP3B-210ENST00000444502 WDR43Q15061 677 aaKnown RBP eCLIP14.12□□□□□ -0.15
TOP3B-210ENST00000444502 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
TOP3B-210ENST00000444502 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
TOP3B-210ENST00000444502 WDR97A6NE52 1622 aa14.11□□□□□ -0.15
TOP3B-210ENST00000444502 CDK13Q14004 1512 aaKnown RBP14.11□□□□□ -0.15
TOP3B-210ENST00000444502 A0A0G2JS52 829 aa14.1□□□□□ -0.15
TOP3B-210ENST00000444502 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
TOP3B-210ENST00000444502 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-210ENST00000444502 AFAP1Q8N556 730 aa14.08□□□□□ -0.15
TOP3B-210ENST00000444502 NAIPQ13075 1403 aa14.08□□□□□ -0.16
TOP3B-210ENST00000444502 SOX12O15370 315 aa14.08□□□□□ -0.16
TOP3B-210ENST00000444502 CC2D1BQ5T0F9 858 aaKnown RBP14.08□□□□□ -0.16
TOP3B-210ENST00000444502 KNSTRNQ9Y448 316 aa14.08□□□□□ -0.16
TOP3B-210ENST00000444502 MAP3K1Q13233 1512 aa14.08□□□□□ -0.16
TOP3B-210ENST00000444502 MSH5O43196 834 aa14.06□□□□□ -0.16
TOP3B-210ENST00000444502 RSPH4AQ5TD94 716 aa14.05□□□□□ -0.16
TOP3B-210ENST00000444502 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
TOP3B-210ENST00000444502 CUL7Q14999 1698 aa14.05□□□□□ -0.16
TOP3B-210ENST00000444502 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
TOP3B-210ENST00000444502 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
TOP3B-210ENST00000444502 NBPF8Q3BBV2 869 aa14.04□□□□□ -0.16
TOP3B-210ENST00000444502 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
TOP3B-210ENST00000444502 ST20-MTHFSA0A0A6YYL1 179 aa14.04□□□□□ -0.16
TOP3B-210ENST00000444502 SRPK2P78362 688 aaKnown RBP14.04□□□□□ -0.16
TOP3B-210ENST00000444502 NEUROD2Q15784 382 aa14.04□□□□□ -0.16
TOP3B-210ENST00000444502 EHBP1L1Q8N3D4 1523 aa14.04□□□□□ -0.16
TOP3B-210ENST00000444502 PRKRIP1Q9H875 184 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-210ENST00000444502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
TOP3B-210ENST00000444502 NPM2Q86SE8 214 aaKnown RBP14.03□□□□□ -0.16
TOP3B-210ENST00000444502 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
TOP3B-210ENST00000444502 ROCK2O75116 1388 aaKnown RBP14.01□□□□□ -0.17
TOP3B-210ENST00000444502 IL27Q8NEV9 243 aa14.01□□□□□ -0.17
TOP3B-210ENST00000444502 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-210ENST00000444502 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-210ENST00000444502 IQGAP2Q13576 1575 aa14.01□□□□□ -0.17
TOP3B-210ENST00000444502 MAPKBP1O60336 1514 aa14□□□□□ -0.17
TOP3B-210ENST00000444502 NUTM2FA1L443 756 aa14□□□□□ -0.17
TOP3B-210ENST00000444502 KIAA0586Q9BVV6 1533 aa13.99□□□□□ -0.17
TOP3B-210ENST00000444502 TMF1P82094 1093 aa13.99□□□□□ -0.17
TOP3B-210ENST00000444502 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
TOP3B-210ENST00000444502 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
TOP3B-210ENST00000444502 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
TOP3B-210ENST00000444502 ANKRD50Q9ULJ7 1429 aa13.97□□□□□ -0.17
TOP3B-210ENST00000444502 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
TOP3B-210ENST00000444502 USP47Q96K76 1375 aa13.97□□□□□ -0.17
TOP3B-210ENST00000444502 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
TOP3B-210ENST00000444502 KIF15Q9NS87 1388 aa13.96□□□□□ -0.17
TOP3B-210ENST00000444502 ANP32AP39687 249 aaKnown RBP13.96□□□□□ -0.17
TOP3B-210ENST00000444502 HECW1Q76N89 1606 aa13.96□□□□□ -0.17
TOP3B-210ENST00000444502 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.17
TOP3B-210ENST00000444502 CCDC7Q96M83 1385 aa13.96□□□□□ -0.18
TOP3B-210ENST00000444502 CCDC184Q52MB2 194 aa13.96□□□□□ -0.18
TOP3B-210ENST00000444502 DAPK1P53355 1430 aa13.95□□□□□ -0.18
TOP3B-210ENST00000444502 TRAK1Q9UPV9 953 aa13.95□□□□□ -0.18
TOP3B-210ENST00000444502 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
TOP3B-210ENST00000444502 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
TOP3B-210ENST00000444502 PTPN23Q9H3S7 1636 aa13.94□□□□□ -0.18
TOP3B-210ENST00000444502 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
TOP3B-210ENST00000444502 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
TOP3B-210ENST00000444502 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
TOP3B-210ENST00000444502 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
TOP3B-210ENST00000444502 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
TOP3B-210ENST00000444502 PKNOX2Q96KN3 472 aa13.92□□□□□ -0.18
TOP3B-210ENST00000444502 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
TOP3B-210ENST00000444502 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms