RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CCER2I3L3R5 266 aa26.43■■□□□ 1.82
PMPCB-204ENST00000444457 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
PMPCB-204ENST00000444457 DNMT1P26358 1616 aaKnown RBP26.39■■□□□ 1.82
PMPCB-204ENST00000444457 DAPK1P53355 1430 aa26.38■■□□□ 1.81
PMPCB-204ENST00000444457 SYNJ2O15056 1496 aa26.37■■□□□ 1.81
PMPCB-204ENST00000444457 TRIM52Q96A61 297 aa26.36■■□□□ 1.81
PMPCB-204ENST00000444457 ROCK1Q13464 1354 aa26.34■■□□□ 1.81
PMPCB-204ENST00000444457 CDK11AQ9UQ88 783 aaPredicted RBP26.33■■□□□ 1.81
PMPCB-204ENST00000444457 ABCC5O15440 1437 aa26.32■■□□□ 1.8
PMPCB-204ENST00000444457 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
PMPCB-204ENST00000444457 MYT1LQ9UL68 1186 aa26.3■■□□□ 1.8
PMPCB-204ENST00000444457 MPHOSPH9Q99550 1183 aa26.29■■□□□ 1.8
PMPCB-204ENST00000444457 TROQ12816 1431 aaPredicted RBP26.29■■□□□ 1.8
PMPCB-204ENST00000444457 PLB1Q6P1J6 1458 aa26.27■■□□□ 1.8
PMPCB-204ENST00000444457 ITSN2Q9NZM3 1697 aa26.27■■□□□ 1.8
PMPCB-204ENST00000444457 NUP160Q12769 1436 aa26.26■■□□□ 1.79
PMPCB-204ENST00000444457 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
PMPCB-204ENST00000444457 ERICH6Q7L0X2 663 aa26.26■■□□□ 1.79
PMPCB-204ENST00000444457 PRG4Q92954 1404 aaPredicted RBP26.26■■□□□ 1.79
PMPCB-204ENST00000444457 ANP32CO43423 234 aa26.25■■□□□ 1.79
PMPCB-204ENST00000444457 ADCY10Q96PN6 1610 aa26.25■■□□□ 1.79
PMPCB-204ENST00000444457 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
PMPCB-204ENST00000444457 CAMSAP2Q08AD1 1489 aa26.21■■□□□ 1.79
PMPCB-204ENST00000444457 KIF14Q15058 1648 aa26.2■■□□□ 1.79
PMPCB-204ENST00000444457 FBLN2P98095 1184 aa26.2■■□□□ 1.79
PMPCB-204ENST00000444457 ADGBQ8N7X0 1667 aa26.18■■□□□ 1.78
PMPCB-204ENST00000444457 GPATCH8Q9UKJ3 1502 aaKnown RBP26.17■■□□□ 1.78
PMPCB-204ENST00000444457 JPH4Q96JJ6 628 aa26.17■■□□□ 1.78
PMPCB-204ENST00000444457 PRKCSHP14314 528 aaPredicted RBP26.17■■□□□ 1.78
PMPCB-204ENST00000444457 FOXD1Q16676 465 aa26.17■■□□□ 1.78
PMPCB-204ENST00000444457 ANKRD30BQ9BXX2 1392 aa26.16■■□□□ 1.78
PMPCB-204ENST00000444457 CROCC2H7BZ55 1655 aa26.15■■□□□ 1.78
PMPCB-204ENST00000444457 RPRD2Q5VT52 1461 aaKnown RBP26.14■■□□□ 1.78
PMPCB-204ENST00000444457 CFDP1Q9UEE9 299 aaPredicted RBP26.14■■□□□ 1.78
PMPCB-204ENST00000444457 HSPA5P11021 654 aaKnown RBP26.13■■□□□ 1.77
PMPCB-204ENST00000444457 L3MBTL2Q969R5 705 aa26.13■■□□□ 1.77
PMPCB-204ENST00000444457 ABCA8O94911 1581 aa26.11■■□□□ 1.77
PMPCB-204ENST00000444457 ADGRL2O95490 1459 aa26.09■■□□□ 1.77
PMPCB-204ENST00000444457 TEX14Q8IWB6 1497 aa26.09■■□□□ 1.77
PMPCB-204ENST00000444457 NCOA1Q15788 1441 aa26.09■■□□□ 1.77
PMPCB-204ENST00000444457 EIF4G2P78344 907 aaKnown RBP eCLIP26.08■■□□□ 1.77
PMPCB-204ENST00000444457 ERICH6BQ5W0A0 696 aa26.08■■□□□ 1.77
PMPCB-204ENST00000444457 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
PMPCB-204ENST00000444457 WASHC2AQ641Q2 1341 aa26.07■■□□□ 1.76
PMPCB-204ENST00000444457 PZPP20742 1482 aa26.07■■□□□ 1.76
PMPCB-204ENST00000444457 CDC42BPAQ5VT25 1732 aa26.07■■□□□ 1.76
PMPCB-204ENST00000444457 DEKP35659 375 aaKnown RBP26.06■■□□□ 1.76
PMPCB-204ENST00000444457 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
PMPCB-204ENST00000444457 ATP10BO94823 1461 aa26.01■■□□□ 1.75
PMPCB-204ENST00000444457 ABCC10Q5T3U5 1492 aa26.01■■□□□ 1.75
PMPCB-204ENST00000444457 PLEKHD1A6NEE1 506 aa25.99■■□□□ 1.75
PMPCB-204ENST00000444457 ANKRD30AQ9BXX3 1397 aa25.99■■□□□ 1.75
PMPCB-204ENST00000444457 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
PMPCB-204ENST00000444457 IRX6P78412 446 aaPredicted RBP25.97■■□□□ 1.75
PMPCB-204ENST00000444457 HNRNPUQ00839 825 aaKnown RBP eCLIP25.96■■□□□ 1.75
PMPCB-204ENST00000444457 CNTLNQ9NXG0 1405 aa25.95■■□□□ 1.75
PMPCB-204ENST00000444457 PPP4R2Q9NY27 417 aa25.95■■□□□ 1.74
PMPCB-204ENST00000444457 SHANK2Q9UPX8 1470 aa25.95■■□□□ 1.74
PMPCB-204ENST00000444457 KIAA1107Q9UPP5 1409 aa25.94■■□□□ 1.74
PMPCB-204ENST00000444457 POLR1AO95602 1720 aaPredicted RBP25.93■■□□□ 1.74
PMPCB-204ENST00000444457 ANKRD50Q9ULJ7 1429 aa25.92■■□□□ 1.74
PMPCB-204ENST00000444457 CCDC7Q96M83 1385 aa25.92■■□□□ 1.74
PMPCB-204ENST00000444457 SPATA31E1Q6ZUB1 1445 aa25.89■■□□□ 1.74
PMPCB-204ENST00000444457 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.74
PMPCB-204ENST00000444457 C11orf95C9JLR9 678 aaPredicted RBP25.89■■□□□ 1.73
PMPCB-204ENST00000444457 MBD5Q9P267 1494 aa25.88■■□□□ 1.73
PMPCB-204ENST00000444457 PTPRGP23470 1445 aa25.86■■□□□ 1.73
PMPCB-204ENST00000444457 CHD1O14646 1710 aa25.85■■□□□ 1.73
PMPCB-204ENST00000444457 PKD2Q13563 968 aa25.84■■□□□ 1.73
PMPCB-204ENST00000444457 ARHGEF5Q12774 1597 aa25.84■■□□□ 1.73
PMPCB-204ENST00000444457 NOP58Q9Y2X3 529 aaKnown RBP25.83■■□□□ 1.73
PMPCB-204ENST00000444457 KDM5DQ9BY66 1539 aa25.82■■□□□ 1.72
PMPCB-204ENST00000444457 CDC42BPBQ9Y5S2 1711 aa25.8■■□□□ 1.72
PMPCB-204ENST00000444457 PREX2Q70Z35 1606 aa25.8■■□□□ 1.72
PMPCB-204ENST00000444457 TSPY4P0CV99 314 aa25.78■■□□□ 1.72
PMPCB-204ENST00000444457 TSPY10P0CW01 314 aa25.78■■□□□ 1.72
PMPCB-204ENST00000444457 KIF7Q2M1P5 1343 aa25.78■■□□□ 1.72
PMPCB-204ENST00000444457 NUP155O75694 1391 aa25.78■■□□□ 1.72
PMPCB-204ENST00000444457 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
PMPCB-204ENST00000444457 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
PMPCB-204ENST00000444457 PRKRIP1Q9H875 184 aaPredicted RBP25.75■■□□□ 1.71
PMPCB-204ENST00000444457 KIF15Q9NS87 1388 aa25.75■■□□□ 1.71
PMPCB-204ENST00000444457 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.71
PMPCB-204ENST00000444457 CCDC141Q6ZP82 1450 aa25.73■■□□□ 1.71
PMPCB-204ENST00000444457 KDM5CP41229 1560 aa25.71■■□□□ 1.71
PMPCB-204ENST00000444457 B4GALNT3Q6L9W6 998 aa25.7■■□□□ 1.71
PMPCB-204ENST00000444457 USP47Q96K76 1375 aa25.7■■□□□ 1.7
PMPCB-204ENST00000444457 BCORL1Q5H9F3 1711 aa25.7■■□□□ 1.7
PMPCB-204ENST00000444457 UHRF1BP1Q6BDS2 1440 aa25.7■■□□□ 1.7
PMPCB-204ENST00000444457 ARHGEF12Q9NZN5 1544 aa25.7■■□□□ 1.7
PMPCB-204ENST00000444457 PAK3O75914 559 aaPredicted RBP25.69■■□□□ 1.7
PMPCB-204ENST00000444457 CCDC184Q52MB2 194 aa25.69■■□□□ 1.7
PMPCB-204ENST00000444457 NBR1Q14596 966 aa25.69■■□□□ 1.7
PMPCB-204ENST00000444457 ZNF326Q5BKZ1 582 aaKnown RBP25.67■■□□□ 1.7
PMPCB-204ENST00000444457 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
PMPCB-204ENST00000444457 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
PMPCB-204ENST00000444457 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
PMPCB-204ENST00000444457 ANO8Q9HCE9 1232 aaPredicted RBP25.64■■□□□ 1.7
PMPCB-204ENST00000444457 SYCP2Q9BX26 1530 aa25.64■■□□□ 1.69
PMPCB-204ENST00000444457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms