RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 KDM4FA0A1W2PPD8 638 aa34.87■■■■□ 3.17
TRAF4-205ENST00000444415 EHBP1L1Q8N3D4 1523 aa34.86■■■■□ 3.17
TRAF4-205ENST00000444415 TIAM1Q13009 1591 aa34.86■■■■□ 3.17
TRAF4-205ENST00000444415 SCAPERQ9BY12 1400 aa34.86■■■■□ 3.17
TRAF4-205ENST00000444415 EFCAB2Q5VUJ9 269 aa34.85■■■■□ 3.17
TRAF4-205ENST00000444415 MTUS2Q5JR59 1369 aa34.85■■■■□ 3.17
TRAF4-205ENST00000444415 ZMYM4Q5VZL5 1548 aa34.85■■■■□ 3.17
TRAF4-205ENST00000444415 POGZQ7Z3K3 1410 aa34.83■■■■□ 3.17
TRAF4-205ENST00000444415 GPATCH8Q9UKJ3 1502 aaKnown RBP34.82■■■■□ 3.16
TRAF4-205ENST00000444415 ARHGEF40Q8TER5 1519 aa34.79■■■■□ 3.16
TRAF4-205ENST00000444415 ABCC1P33527 1531 aa34.78■■■■□ 3.16
TRAF4-205ENST00000444415 ARHGEF12Q9NZN5 1544 aa34.76■■■■□ 3.16
TRAF4-205ENST00000444415 SAMD9LQ8IVG5 1584 aa34.74■■■■□ 3.15
TRAF4-205ENST00000444415 ITSN2Q9NZM3 1697 aa34.73■■■■□ 3.15
TRAF4-205ENST00000444415 KDM5CP41229 1560 aa34.72■■■■□ 3.15
TRAF4-205ENST00000444415 YEATS2Q9ULM3 1422 aa34.72■■■■□ 3.15
TRAF4-205ENST00000444415 MAP3K1Q13233 1512 aa34.7■■■■□ 3.15
TRAF4-205ENST00000444415 SIGLEC1Q9BZZ2 1709 aa34.69■■■■□ 3.14
TRAF4-205ENST00000444415 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
TRAF4-205ENST00000444415 LRRC9Q6ZRR7 1453 aa34.69■■■■□ 3.14
TRAF4-205ENST00000444415 ZFYVE16Q7Z3T8 1539 aa34.68■■■■□ 3.14
TRAF4-205ENST00000444415 SUPT6HQ7KZ85 1726 aaKnown RBP34.68■■■■□ 3.14
TRAF4-205ENST00000444415 CCNB3Q8WWL7 1395 aa34.67■■■■□ 3.14
TRAF4-205ENST00000444415 AEBP2Q6ZN18 517 aaPredicted RBP34.67■■■■□ 3.14
TRAF4-205ENST00000444415 MAGI2Q86UL8 1455 aa34.67■■■■□ 3.14
TRAF4-205ENST00000444415 TRAPPC8Q9Y2L5 1435 aa34.66■■■■□ 3.14
TRAF4-205ENST00000444415 NCOA2Q15596 1464 aa34.66■■■■□ 3.14
TRAF4-205ENST00000444415 AFAP1Q8N556 730 aa34.64■■■■□ 3.14
TRAF4-205ENST00000444415 KANK4Q5T7N3 995 aaPredicted RBP34.62■■■■□ 3.13
TRAF4-205ENST00000444415 SYCP2Q9BX26 1530 aa34.62■■■■□ 3.13
TRAF4-205ENST00000444415 HECW2Q9P2P5 1572 aa34.59■■■■□ 3.13
TRAF4-205ENST00000444415 CFDP1Q9UEE9 299 aaPredicted RBP34.58■■■■□ 3.13
TRAF4-205ENST00000444415 ZNF777Q9ULD5 760 aaPredicted RBP34.57■■■■□ 3.12
TRAF4-205ENST00000444415 BCORL1Q5H9F3 1711 aa34.56■■■■□ 3.12
TRAF4-205ENST00000444415 ADAMTSL3P82987 1691 aa34.55■■■■□ 3.12
TRAF4-205ENST00000444415 MLH3Q9UHC1 1453 aa34.54■■■■□ 3.12
TRAF4-205ENST00000444415 ABCA6Q8N139 1617 aa34.53■■■■□ 3.12
TRAF4-205ENST00000444415 DIP2CQ9Y2E4 1556 aa34.53■■■■□ 3.12
TRAF4-205ENST00000444415 KIAA1107Q9UPP5 1409 aa34.53■■■■□ 3.12
TRAF4-205ENST00000444415 KIDINS220Q9ULH0 1771 aa34.52■■■■□ 3.12
TRAF4-205ENST00000444415 ZNF644Q9H582 1327 aaPredicted RBP34.52■■■■□ 3.12
TRAF4-205ENST00000444415 ATP10AO60312 1499 aa34.49■■■■□ 3.11
TRAF4-205ENST00000444415 PLEKHH2Q8IVE3 1493 aa34.48■■■■□ 3.11
TRAF4-205ENST00000444415 HNRNPMP52272 730 aaKnown RBP eCLIP34.48■■■■□ 3.11
TRAF4-205ENST00000444415 MBD5Q9P267 1494 aa34.46■■■■□ 3.11
TRAF4-205ENST00000444415 C9orf84Q5VXU9 1444 aa34.46■■■■□ 3.11
TRAF4-205ENST00000444415 MADDQ8WXG6 1647 aa34.43■■■■□ 3.1
TRAF4-205ENST00000444415 CAMSAP2Q08AD1 1489 aa34.42■■■■□ 3.1
TRAF4-205ENST00000444415 REREQ9P2R6 1566 aa34.41■■■■□ 3.1
TRAF4-205ENST00000444415 INO80Q9ULG1 1556 aaPredicted RBP34.41■■■■□ 3.1
TRAF4-205ENST00000444415 ARID4BQ4LE39 1312 aaPredicted RBP34.41■■■■□ 3.1
TRAF4-205ENST00000444415 ATP7AQ04656 1500 aa34.36■■■■□ 3.09
TRAF4-205ENST00000444415 MYOM3Q5VTT5 1437 aa34.34■■■■□ 3.09
TRAF4-205ENST00000444415 SPAG9O60271 1321 aaKnown RBP34.32■■■■□ 3.08
TRAF4-205ENST00000444415 PTPRMP28827 1452 aa34.31■■■■□ 3.08
TRAF4-205ENST00000444415 APLP2Q06481 763 aa34.31■■■■□ 3.08
TRAF4-205ENST00000444415 MYT1LQ9UL68 1186 aa34.31■■■■□ 3.08
TRAF4-205ENST00000444415 RIMS1Q86UR5 1692 aaKnown RBP34.31■■■■□ 3.08
TRAF4-205ENST00000444415 ARHGEF5Q12774 1597 aa34.27■■■■□ 3.08
TRAF4-205ENST00000444415 AGLP35573 1532 aa34.27■■■■□ 3.08
TRAF4-205ENST00000444415 CCDC141Q6ZP82 1450 aa34.27■■■■□ 3.08
TRAF4-205ENST00000444415 MIA2Q96PC5 1412 aa34.26■■■■□ 3.08
TRAF4-205ENST00000444415 FER1L4A9Z1Z3 1794 aa34.26■■■■□ 3.08
TRAF4-205ENST00000444415 PLXNC1O60486 1568 aa34.25■■■■□ 3.07
TRAF4-205ENST00000444415 MLECQ14165 292 aa34.24■■■■□ 3.07
TRAF4-205ENST00000444415 RTEL1-TNFRSF6BF6WH68 1400 aa34.2■■■■□ 3.07
TRAF4-205ENST00000444415 ADGBQ8N7X0 1667 aa34.19■■■■□ 3.06
TRAF4-205ENST00000444415 PTPN23Q9H3S7 1636 aa34.16■■■■□ 3.06
TRAF4-205ENST00000444415 A2MP01023 1474 aa34.16■■■■□ 3.06
TRAF4-205ENST00000444415 FGD6Q6ZV73 1430 aa34.14■■■■□ 3.06
TRAF4-205ENST00000444415 RSPH4AQ5TD94 716 aa34.12■■■■□ 3.05
TRAF4-205ENST00000444415 TCOF1Q13428 1488 aaKnown RBP34.11■■■■□ 3.05
TRAF4-205ENST00000444415 MAST1Q9Y2H9 1570 aa34.11■■■■□ 3.05
TRAF4-205ENST00000444415 CROCC2H7BZ55 1655 aa34.06■■■■□ 3.04
TRAF4-205ENST00000444415 DHX29Q7Z478 1369 aaKnown RBP34.02■■■■□ 3.04
TRAF4-205ENST00000444415 ABCC5O15440 1437 aa34.01■■■■□ 3.04
TRAF4-205ENST00000444415 DNMT1P26358 1616 aaKnown RBP34.01■■■■□ 3.04
TRAF4-205ENST00000444415 TSPY4P0CV99 314 aa33.98■■■■□ 3.03
TRAF4-205ENST00000444415 TSPY10P0CW01 314 aa33.98■■■■□ 3.03
TRAF4-205ENST00000444415 C3P01024 1663 aa33.98■■■■□ 3.03
TRAF4-205ENST00000444415 SHANK2Q9UPX8 1470 aa33.96■■■■□ 3.03
TRAF4-205ENST00000444415 DAPK1P53355 1430 aa33.95■■■■□ 3.03
TRAF4-205ENST00000444415 CEBPAP49715 358 aaPredicted RBP33.95■■■■□ 3.02
TRAF4-205ENST00000444415 PLPPR3Q6T4P5 718 aa33.95■■■■□ 3.02
TRAF4-205ENST00000444415 LMTK3Q96Q04 1460 aa33.92■■■■□ 3.02
TRAF4-205ENST00000444415 PPARGC1BQ86YN6 1023 aaKnown RBP33.92■■■■□ 3.02
TRAF4-205ENST00000444415 MROH2AA6NES4 1674 aa33.91■■■■□ 3.02
TRAF4-205ENST00000444415 CLTCQ00610 1675 aaKnown RBP33.91■■■■□ 3.02
TRAF4-205ENST00000444415 CNTLNQ9NXG0 1405 aa33.88■■■■□ 3.01
TRAF4-205ENST00000444415 GGT6Q6P531 493 aa33.86■■■■□ 3.01
TRAF4-205ENST00000444415 KIF3BO15066 747 aa33.82■■■■□ 3.01
TRAF4-205ENST00000444415 RNF17Q9BXT8 1623 aaKnown RBP33.82■■■■□ 3.01
TRAF4-205ENST00000444415 EIF2AK4Q9P2K8 1649 aaKnown RBP33.82■■■■□ 3.01
TRAF4-205ENST00000444415 PREX1Q8TCU6 1659 aa33.81■■■■□ 3
TRAF4-205ENST00000444415 DUOX2Q9NRD8 1548 aa33.81■■■■□ 3
TRAF4-205ENST00000444415 MROH1Q8NDA8 1641 aa33.8■■■■□ 3
TRAF4-205ENST00000444415 SETD1BQ9UPS6 1966 aaKnown RBP33.79■■■■□ 3
TRAF4-205ENST00000444415 ZMYM3Q14202 1370 aa33.78■■■■□ 3
TRAF4-205ENST00000444415 KIF15Q9NS87 1388 aa33.78■■■■□ 3
TRAF4-205ENST00000444415 FAM50AQ14320 339 aaKnown RBP33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms