RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
MCF2L-218ENST00000442625 PPP4R2Q9NY27 417 aa19.4■□□□□ 0.7
MCF2L-218ENST00000442625 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
MCF2L-218ENST00000442625 TCOF1Q13428 1488 aaKnown RBP19.38■□□□□ 0.69
MCF2L-218ENST00000442625 EPRSP07814 1512 aaKnown RBP19.37■□□□□ 0.69
MCF2L-218ENST00000442625 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
MCF2L-218ENST00000442625 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
MCF2L-218ENST00000442625 PRKRIP1Q9H875 184 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-218ENST00000442625 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-218ENST00000442625 NBPF8Q3BBV2 869 aa19.35■□□□□ 0.69
MCF2L-218ENST00000442625 HECW1Q76N89 1606 aa19.35■□□□□ 0.69
MCF2L-218ENST00000442625 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
MCF2L-218ENST00000442625 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
MCF2L-218ENST00000442625 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-218ENST00000442625 CCDC7Q96M83 1385 aa19.32■□□□□ 0.68
MCF2L-218ENST00000442625 NBR1Q14596 966 aa19.31■□□□□ 0.68
MCF2L-218ENST00000442625 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
MCF2L-218ENST00000442625 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
MCF2L-218ENST00000442625 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
MCF2L-218ENST00000442625 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-218ENST00000442625 IQGAP2Q13576 1575 aa19.29■□□□□ 0.68
MCF2L-218ENST00000442625 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
MCF2L-218ENST00000442625 NCOA1Q15788 1441 aa19.28■□□□□ 0.68
MCF2L-218ENST00000442625 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
MCF2L-218ENST00000442625 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
MCF2L-218ENST00000442625 ANKRD30BQ9BXX2 1392 aa19.27■□□□□ 0.68
MCF2L-218ENST00000442625 DEKP35659 375 aaKnown RBP19.27■□□□□ 0.67
MCF2L-218ENST00000442625 KIF7Q2M1P5 1343 aa19.26■□□□□ 0.67
MCF2L-218ENST00000442625 WDR62O43379 1518 aa19.25■□□□□ 0.67
MCF2L-218ENST00000442625 DAPK1P53355 1430 aa19.25■□□□□ 0.67
MCF2L-218ENST00000442625 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
MCF2L-218ENST00000442625 ABCC5O15440 1437 aa19.23■□□□□ 0.67
MCF2L-218ENST00000442625 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
MCF2L-218ENST00000442625 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
MCF2L-218ENST00000442625 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
MCF2L-218ENST00000442625 TEX14Q8IWB6 1497 aa19.21■□□□□ 0.67
MCF2L-218ENST00000442625 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
MCF2L-218ENST00000442625 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
MCF2L-218ENST00000442625 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
MCF2L-218ENST00000442625 NOP58Q9Y2X3 529 aaKnown RBP19.18■□□□□ 0.66
MCF2L-218ENST00000442625 ROCK1Q13464 1354 aa19.17■□□□□ 0.66
MCF2L-218ENST00000442625 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-218ENST00000442625 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
MCF2L-218ENST00000442625 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
MCF2L-218ENST00000442625 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
MCF2L-218ENST00000442625 PKNOX2Q96KN3 472 aa19.14■□□□□ 0.65
MCF2L-218ENST00000442625 CCDC136Q96JN2 1154 aa19.13■□□□□ 0.65
MCF2L-218ENST00000442625 DNMT1P26358 1616 aaKnown RBP19.13■□□□□ 0.65
MCF2L-218ENST00000442625 PRG4Q92954 1404 aaPredicted RBP19.12■□□□□ 0.65
MCF2L-218ENST00000442625 CFDP1Q9UEE9 299 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-218ENST00000442625 DISP1Q96F81 1524 aa19.11■□□□□ 0.65
MCF2L-218ENST00000442625 PZPP20742 1482 aa19.09■□□□□ 0.65
MCF2L-218ENST00000442625 PKD2Q13563 968 aa19.08■□□□□ 0.65
MCF2L-218ENST00000442625 KIAA0556O60303 1618 aa19.08■□□□□ 0.64
MCF2L-218ENST00000442625 USP47Q96K76 1375 aa19.07■□□□□ 0.64
MCF2L-218ENST00000442625 NUDCQ9Y266 331 aa19.07■□□□□ 0.64
MCF2L-218ENST00000442625 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
MCF2L-218ENST00000442625 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-218ENST00000442625 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
MCF2L-218ENST00000442625 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
MCF2L-218ENST00000442625 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
MCF2L-218ENST00000442625 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
MCF2L-218ENST00000442625 NPM2Q86SE8 214 aaKnown RBP19.03■□□□□ 0.64
MCF2L-218ENST00000442625 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
MCF2L-218ENST00000442625 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
MCF2L-218ENST00000442625 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
MCF2L-218ENST00000442625 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
MCF2L-218ENST00000442625 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
MCF2L-218ENST00000442625 FBLN2P98095 1184 aa19.01■□□□□ 0.63
MCF2L-218ENST00000442625 IPO9Q96P70 1041 aaKnown RBP19.01■□□□□ 0.63
MCF2L-218ENST00000442625 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
MCF2L-218ENST00000442625 KDM2AQ9Y2K7 1162 aa19■□□□□ 0.63
MCF2L-218ENST00000442625 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
MCF2L-218ENST00000442625 GPATCH8Q9UKJ3 1502 aaKnown RBP18.99■□□□□ 0.63
MCF2L-218ENST00000442625 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
MCF2L-218ENST00000442625 ZBTB47Q9UFB7 747 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-218ENST00000442625 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
MCF2L-218ENST00000442625 KIF14Q15058 1648 aa18.97■□□□□ 0.63
MCF2L-218ENST00000442625 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
MCF2L-218ENST00000442625 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-218ENST00000442625 PNISRQ8TF01 805 aaKnown RBP18.96■□□□□ 0.63
MCF2L-218ENST00000442625 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
MCF2L-218ENST00000442625 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
MCF2L-218ENST00000442625 RNF123Q5XPI4 1314 aa18.95■□□□□ 0.62
MCF2L-218ENST00000442625 NUP155O75694 1391 aa18.95■□□□□ 0.62
MCF2L-218ENST00000442625 ANKRD30AQ9BXX3 1397 aa18.95■□□□□ 0.62
MCF2L-218ENST00000442625 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-218ENST00000442625 ANKRD50Q9ULJ7 1429 aa18.94■□□□□ 0.62
MCF2L-218ENST00000442625 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
MCF2L-218ENST00000442625 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
MCF2L-218ENST00000442625 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
MCF2L-218ENST00000442625 LAS1LQ9Y4W2 734 aaKnown RBP18.92■□□□□ 0.62
MCF2L-218ENST00000442625 RTL5Q5HYW3 569 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-218ENST00000442625 KDM5CP41229 1560 aa18.91■□□□□ 0.62
MCF2L-218ENST00000442625 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
MCF2L-218ENST00000442625 DCAF11Q8TEB1 546 aa18.9■□□□□ 0.62
MCF2L-218ENST00000442625 ADGRL2O95490 1459 aa18.89■□□□□ 0.61
MCF2L-218ENST00000442625 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
MCF2L-218ENST00000442625 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
MCF2L-218ENST00000442625 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms