RNA–Protein interactions for RNA: ENST00000441562.1

TPTE2P3-201, Transcript of transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3, humanhuman

BASIC

Gene TPTE2P3, Length 1,189 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE2P3-201ENST00000441562 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
TPTE2P3-201ENST00000441562 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
TPTE2P3-201ENST00000441562 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
TPTE2P3-201ENST00000441562 MARVELD3Q96A59 401 aa14.32□□□□□ -0.12
TPTE2P3-201ENST00000441562 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
TPTE2P3-201ENST00000441562 TMC2Q8TDI7 906 aa14.28□□□□□ -0.12
TPTE2P3-201ENST00000441562 C2orf72A6NCS6 295 aa14.27□□□□□ -0.13
TPTE2P3-201ENST00000441562 EMP3P54852 163 aa14.27□□□□□ -0.13
TPTE2P3-201ENST00000441562 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
TPTE2P3-201ENST00000441562 KIF3CO14782 793 aa14.23□□□□□ -0.13
TPTE2P3-201ENST00000441562 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
TPTE2P3-201ENST00000441562 CDAN1Q8IWY9 1227 aa14.2□□□□□ -0.14
TPTE2P3-201ENST00000441562 HOXB1P14653 301 aaPredicted RBP14.19□□□□□ -0.14
TPTE2P3-201ENST00000441562 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
TPTE2P3-201ENST00000441562 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
TPTE2P3-201ENST00000441562 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
TPTE2P3-201ENST00000441562 HS3ST6Q96QI5 342 aa14.12□□□□□ -0.15
TPTE2P3-201ENST00000441562 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
TPTE2P3-201ENST00000441562 GPR153Q6NV75 609 aa14.11□□□□□ -0.15
TPTE2P3-201ENST00000441562 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
TPTE2P3-201ENST00000441562 ERBB3P21860 1342 aa14.11□□□□□ -0.15
TPTE2P3-201ENST00000441562 FOXK1P85037 733 aa14.07□□□□□ -0.16
TPTE2P3-201ENST00000441562 PLPP6Q8IY26 295 aa14.07□□□□□ -0.16
TPTE2P3-201ENST00000441562 DSG2Q14126 1118 aa14.06□□□□□ -0.16
TPTE2P3-201ENST00000441562 KHSRPQ92945 711 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPTE2P3-201ENST00000441562 POTEB3A0JP26 581 aa14.05□□□□□ -0.16
TPTE2P3-201ENST00000441562 POTEBQ6S5H4 581 aa14.05□□□□□ -0.16
TPTE2P3-201ENST00000441562 SLC34A2O95436 690 aa14.04□□□□□ -0.16
TPTE2P3-201ENST00000441562 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
TPTE2P3-201ENST00000441562 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
TPTE2P3-201ENST00000441562 PCDHGA4Q9Y5G9 962 aa14.03□□□□□ -0.16
TPTE2P3-201ENST00000441562 PDE4AP27815 886 aa14.02□□□□□ -0.17
TPTE2P3-201ENST00000441562 CRISPLD2Q9H0B8 497 aa14.02□□□□□ -0.17
TPTE2P3-201ENST00000441562 NUDT7P0C024 238 aa14□□□□□ -0.17
TPTE2P3-201ENST00000441562 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
TPTE2P3-201ENST00000441562 PPP1R15BQ5SWA1 713 aa13.98□□□□□ -0.17
TPTE2P3-201ENST00000441562 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
TPTE2P3-201ENST00000441562 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
TPTE2P3-201ENST00000441562 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
TPTE2P3-201ENST00000441562 PTCD2Q8WV60 388 aaKnown RBP13.94□□□□□ -0.18
TPTE2P3-201ENST00000441562 TBC1D12O60347 775 aa13.93□□□□□ -0.18
TPTE2P3-201ENST00000441562 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
TPTE2P3-201ENST00000441562 PAXIP1Q6ZW49 1069 aaPredicted RBP13.92□□□□□ -0.18
TPTE2P3-201ENST00000441562 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
TPTE2P3-201ENST00000441562 DDX27Q96GQ7 796 aaKnown RBP13.92□□□□□ -0.18
TPTE2P3-201ENST00000441562 UPF1Q92900 1129 aaKnown RBP eCLIP13.9□□□□□ -0.18
TPTE2P3-201ENST00000441562 KRTAP3-3Q9BYR6 98 aa13.9□□□□□ -0.18
TPTE2P3-201ENST00000441562 KRTAP3-2Q9BYR7 98 aa13.9□□□□□ -0.18
TPTE2P3-201ENST00000441562 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
TPTE2P3-201ENST00000441562 ZNF687Q8N1G0 1237 aa13.89□□□□□ -0.19
TPTE2P3-201ENST00000441562 MFSD10Q14728 455 aa13.85□□□□□ -0.19
TPTE2P3-201ENST00000441562 OXER1Q8TDS5 423 aa13.84□□□□□ -0.19
TPTE2P3-201ENST00000441562 SPNS2Q8IVW8 549 aa13.83□□□□□ -0.2
TPTE2P3-201ENST00000441562 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
TPTE2P3-201ENST00000441562 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
TPTE2P3-201ENST00000441562 MAP3K9P80192 1104 aa13.75□□□□□ -0.21
TPTE2P3-201ENST00000441562 MMRN1Q13201 1228 aa13.73□□□□□ -0.21
TPTE2P3-201ENST00000441562 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
TPTE2P3-201ENST00000441562 PBX2P40425 430 aa13.72□□□□□ -0.21
TPTE2P3-201ENST00000441562 EMILIN3Q9NT22 766 aa13.72□□□□□ -0.21
TPTE2P3-201ENST00000441562 EVI5O60447 810 aa13.71□□□□□ -0.21
TPTE2P3-201ENST00000441562 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
TPTE2P3-201ENST00000441562 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
TPTE2P3-201ENST00000441562 LSM11P83369 360 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPTE2P3-201ENST00000441562 ZNF454Q8N9F8 522 aa13.68□□□□□ -0.22
TPTE2P3-201ENST00000441562 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
TPTE2P3-201ENST00000441562 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
TPTE2P3-201ENST00000441562 CAMK2BQ13554 666 aa13.65□□□□□ -0.22
TPTE2P3-201ENST00000441562 WDR70Q9NW82 654 aa13.65□□□□□ -0.22
TPTE2P3-201ENST00000441562 ANO8Q9HCE9 1232 aaPredicted RBP13.63□□□□□ -0.23
TPTE2P3-201ENST00000441562 DPYSL4O14531 572 aa13.62□□□□□ -0.23
TPTE2P3-201ENST00000441562 KCNH8Q96L42 1107 aa13.62□□□□□ -0.23
TPTE2P3-201ENST00000441562 PSEN2P49810 448 aa13.6□□□□□ -0.23
TPTE2P3-201ENST00000441562 FOSBP53539 338 aa13.6□□□□□ -0.23
TPTE2P3-201ENST00000441562 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
TPTE2P3-201ENST00000441562 KCNK17Q96T54 332 aa13.59□□□□□ -0.23
TPTE2P3-201ENST00000441562 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
TPTE2P3-201ENST00000441562 PTGER2P43116 358 aa13.57□□□□□ -0.24
TPTE2P3-201ENST00000441562 E2F4Q16254 413 aa13.57□□□□□ -0.24
TPTE2P3-201ENST00000441562 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
TPTE2P3-201ENST00000441562 DMRTA1Q5VZB9 504 aa13.55□□□□□ -0.24
TPTE2P3-201ENST00000441562 ZDHHC16Q969W1 377 aa13.55□□□□□ -0.24
TPTE2P3-201ENST00000441562 RNF166Q96A37 237 aaPredicted RBP13.55□□□□□ -0.24
TPTE2P3-201ENST00000441562 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
TPTE2P3-201ENST00000441562 ADGRD1Q6QNK2 874 aa13.53□□□□□ -0.24
TPTE2P3-201ENST00000441562 PTPREP23469 700 aa13.52□□□□□ -0.25
TPTE2P3-201ENST00000441562 ADAM33Q9BZ11 813 aa13.5□□□□□ -0.25
TPTE2P3-201ENST00000441562 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
TPTE2P3-201ENST00000441562 TK2O00142 265 aa13.49□□□□□ -0.25
TPTE2P3-201ENST00000441562 PHF14O94880 888 aa13.48□□□□□ -0.25
TPTE2P3-201ENST00000441562 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
TPTE2P3-201ENST00000441562 DDX12PQ92771 950 aa13.46□□□□□ -0.25
TPTE2P3-201ENST00000441562 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
TPTE2P3-201ENST00000441562 PDIA6Q15084 440 aa13.45□□□□□ -0.26
TPTE2P3-201ENST00000441562 FBXW7Q969H0 707 aa13.45□□□□□ -0.26
TPTE2P3-201ENST00000441562 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
TPTE2P3-201ENST00000441562 SPDYE16A6NNV3 312 aaPredicted RBP13.44□□□□□ -0.26
TPTE2P3-201ENST00000441562 EPAS1Q99814 870 aa13.44□□□□□ -0.26
TPTE2P3-201ENST00000441562 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
TPTE2P3-201ENST00000441562 HRO43593 1189 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms