RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 FER1L4A9Z1Z3 1794 aa31.27■■■□□ 2.6
HDLBP-218ENST00000441124 SCAPERQ9BY12 1400 aa31.26■■■□□ 2.6
HDLBP-218ENST00000441124 CEBPAP49715 358 aaPredicted RBP31.26■■■□□ 2.59
HDLBP-218ENST00000441124 SOCS7O14512 581 aa31.23■■■□□ 2.59
HDLBP-218ENST00000441124 DMRT2Q9Y5R5 561 aa31.19■■■□□ 2.58
HDLBP-218ENST00000441124 ATP10AO60312 1499 aa31.18■■■□□ 2.58
HDLBP-218ENST00000441124 C9orf84Q5VXU9 1444 aa31.16■■■□□ 2.58
HDLBP-218ENST00000441124 CDK13Q14004 1512 aaKnown RBP31.16■■■□□ 2.58
HDLBP-218ENST00000441124 ARHGEF12Q9NZN5 1544 aa31.16■■■□□ 2.58
HDLBP-218ENST00000441124 PLCH2O75038 1416 aa31.15■■■□□ 2.58
HDLBP-218ENST00000441124 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
HDLBP-218ENST00000441124 PREX1Q8TCU6 1659 aa31.14■■■□□ 2.58
HDLBP-218ENST00000441124 MYT1LQ9UL68 1186 aa31.13■■■□□ 2.57
HDLBP-218ENST00000441124 EFCAB2Q5VUJ9 269 aa31.11■■■□□ 2.57
HDLBP-218ENST00000441124 UHRF1BP1Q6BDS2 1440 aa31.11■■■□□ 2.57
HDLBP-218ENST00000441124 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
HDLBP-218ENST00000441124 SPATA31D1Q6ZQQ2 1576 aa31.01■■■□□ 2.56
HDLBP-218ENST00000441124 AFAP1Q8N556 730 aa31.01■■■□□ 2.55
HDLBP-218ENST00000441124 EEA1Q15075 1411 aa30.99■■■□□ 2.55
HDLBP-218ENST00000441124 ESF1Q9H501 851 aaKnown RBP30.98■■■□□ 2.55
HDLBP-218ENST00000441124 ZNF518AQ6AHZ1 1483 aa30.97■■■□□ 2.55
HDLBP-218ENST00000441124 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
HDLBP-218ENST00000441124 EHMT2Q96KQ7 1210 aa30.95■■■□□ 2.55
HDLBP-218ENST00000441124 PTPRTO14522 1441 aa30.94■■■□□ 2.54
HDLBP-218ENST00000441124 MYO5CQ9NQX4 1742 aa30.93■■■□□ 2.54
HDLBP-218ENST00000441124 ARHGAP5Q13017 1502 aa30.93■■■□□ 2.54
HDLBP-218ENST00000441124 KIF14Q15058 1648 aa30.87■■■□□ 2.53
HDLBP-218ENST00000441124 KDM5CP41229 1560 aa30.86■■■□□ 2.53
HDLBP-218ENST00000441124 DIP2CQ9Y2E4 1556 aa30.86■■■□□ 2.53
HDLBP-218ENST00000441124 FMN1Q68DA7 1419 aa30.84■■■□□ 2.53
HDLBP-218ENST00000441124 TRAPPC8Q9Y2L5 1435 aa30.82■■■□□ 2.52
HDLBP-218ENST00000441124 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
HDLBP-218ENST00000441124 LTBP4Q8N2S1 1624 aa30.82■■■□□ 2.52
HDLBP-218ENST00000441124 SETD1BQ9UPS6 1966 aaKnown RBP30.82■■■□□ 2.52
HDLBP-218ENST00000441124 CLIP1P30622 1438 aa30.81■■■□□ 2.52
HDLBP-218ENST00000441124 TROQ12816 1431 aaPredicted RBP30.81■■■□□ 2.52
HDLBP-218ENST00000441124 C3P01024 1663 aa30.81■■■□□ 2.52
HDLBP-218ENST00000441124 ABCA6Q8N139 1617 aa30.78■■■□□ 2.52
HDLBP-218ENST00000441124 NCOA1Q15788 1441 aa30.77■■■□□ 2.52
HDLBP-218ENST00000441124 REREQ9P2R6 1566 aa30.76■■■□□ 2.52
HDLBP-218ENST00000441124 MLH3Q9UHC1 1453 aa30.76■■■□□ 2.51
HDLBP-218ENST00000441124 IQSEC2Q5JU85 1478 aa30.74■■■□□ 2.51
HDLBP-218ENST00000441124 UBAP1LF5GYI3 381 aa30.72■■■□□ 2.51
HDLBP-218ENST00000441124 AGLP35573 1532 aa30.72■■■□□ 2.51
HDLBP-218ENST00000441124 ARHGAP35Q9NRY4 1499 aa30.7■■■□□ 2.51
HDLBP-218ENST00000441124 CNTLNQ9NXG0 1405 aa30.7■■■□□ 2.5
HDLBP-218ENST00000441124 NCKAP5LQ9HCH0 1330 aa30.69■■■□□ 2.5
HDLBP-218ENST00000441124 ZNF335Q9H4Z2 1342 aaPredicted RBP30.68■■■□□ 2.5
HDLBP-218ENST00000441124 CAMSAP1Q5T5Y3 1602 aa30.67■■■□□ 2.5
HDLBP-218ENST00000441124 ABCC1P33527 1531 aa30.64■■■□□ 2.5
HDLBP-218ENST00000441124 CDC42BPBQ9Y5S2 1711 aa30.62■■■□□ 2.49
HDLBP-218ENST00000441124 ZNF777Q9ULD5 760 aaPredicted RBP30.61■■■□□ 2.49
HDLBP-218ENST00000441124 NPATQ14207 1427 aa30.6■■■□□ 2.49
HDLBP-218ENST00000441124 ZMYM3Q14202 1370 aa30.59■■■□□ 2.49
HDLBP-218ENST00000441124 PREX2Q70Z35 1606 aa30.58■■■□□ 2.49
HDLBP-218ENST00000441124 ITSN2Q9NZM3 1697 aa30.57■■■□□ 2.48
HDLBP-218ENST00000441124 KIDINS220Q9ULH0 1771 aa30.56■■■□□ 2.48
HDLBP-218ENST00000441124 SCAF1Q9H7N4 1312 aaKnown RBP30.53■■■□□ 2.48
HDLBP-218ENST00000441124 PKD2Q13563 968 aa30.52■■■□□ 2.48
HDLBP-218ENST00000441124 LRRIQ1Q96JM4 1722 aa30.52■■■□□ 2.48
HDLBP-218ENST00000441124 SPAG9O60271 1321 aaKnown RBP30.51■■■□□ 2.48
HDLBP-218ENST00000441124 SAMD9LQ8IVG5 1584 aa30.48■■■□□ 2.47
HDLBP-218ENST00000441124 MROH2AA6NES4 1674 aa30.47■■■□□ 2.47
HDLBP-218ENST00000441124 HNRNPMP52272 730 aaKnown RBP eCLIP30.47■■■□□ 2.474e-7■■■■■ 30
HDLBP-218ENST00000441124 PPP6R1Q9UPN7 881 aa30.46■■■□□ 2.47
HDLBP-218ENST00000441124 CCDC18Q5T9S5 1454 aa30.45■■■□□ 2.47
HDLBP-218ENST00000441124 PIP4K2BP78356 416 aa30.45■■■□□ 2.47
HDLBP-218ENST00000441124 GGT6Q6P531 493 aa30.45■■■□□ 2.47
HDLBP-218ENST00000441124 PLA2R1Q13018 1463 aa30.44■■■□□ 2.46
HDLBP-218ENST00000441124 SUPT6HQ7KZ85 1726 aaKnown RBP30.43■■■□□ 2.46
HDLBP-218ENST00000441124 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
HDLBP-218ENST00000441124 HSPA1LP34931 641 aa30.42■■■□□ 2.46
HDLBP-218ENST00000441124 MYO3AQ8NEV4 1616 aa30.42■■■□□ 2.46
HDLBP-218ENST00000441124 CASKIN1Q8WXD9 1431 aa30.41■■■□□ 2.46
HDLBP-218ENST00000441124 CLTCQ00610 1675 aaKnown RBP30.41■■■□□ 2.46
HDLBP-218ENST00000441124 CEP170BQ9Y4F5 1589 aaPredicted RBP30.41■■■□□ 2.46
HDLBP-218ENST00000441124 PTPRKQ15262 1439 aa30.4■■■□□ 2.46
HDLBP-218ENST00000441124 TCOF1Q13428 1488 aaKnown RBP30.4■■■□□ 2.46
HDLBP-218ENST00000441124 CDC42BPAQ5VT25 1732 aa30.39■■■□□ 2.45
HDLBP-218ENST00000441124 ZNF142P52746 1687 aaPredicted RBP30.36■■■□□ 2.45
HDLBP-218ENST00000441124 A2MP01023 1474 aa30.36■■■□□ 2.45
HDLBP-218ENST00000441124 ATP7AQ04656 1500 aa30.36■■■□□ 2.45
HDLBP-218ENST00000441124 MED1Q15648 1581 aaPredicted RBP30.32■■■□□ 2.45
HDLBP-218ENST00000441124 TOM1O60784 492 aa30.32■■■□□ 2.44
HDLBP-218ENST00000441124 CFDP1Q9UEE9 299 aaPredicted RBP30.32■■■□□ 2.44
HDLBP-218ENST00000441124 GPATCH8Q9UKJ3 1502 aaKnown RBP30.32■■■□□ 2.44
HDLBP-218ENST00000441124 PHF23Q9BUL5 403 aaPredicted RBP30.29■■■□□ 2.44
HDLBP-218ENST00000441124 PLXNC1O60486 1568 aa30.28■■■□□ 2.44
HDLBP-218ENST00000441124 A2ML1A8K2U0 1454 aa30.26■■■□□ 2.44
HDLBP-218ENST00000441124 INO80Q9ULG1 1556 aaPredicted RBP30.25■■■□□ 2.43
HDLBP-218ENST00000441124 KIAA1107Q9UPP5 1409 aa30.25■■■□□ 2.43
HDLBP-218ENST00000441124 PLEKHH2Q8IVE3 1493 aa30.25■■■□□ 2.43
HDLBP-218ENST00000441124 CCNB3Q8WWL7 1395 aa30.24■■■□□ 2.43
HDLBP-218ENST00000441124 FYCO1Q9BQS8 1478 aa30.23■■■□□ 2.43
HDLBP-218ENST00000441124 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
HDLBP-218ENST00000441124 DNMT1P26358 1616 aaKnown RBP30.2■■■□□ 2.43
HDLBP-218ENST00000441124 CPS1P31327 1500 aa30.2■■■□□ 2.42
HDLBP-218ENST00000441124 SHANK2Q9UPX8 1470 aa30.19■■■□□ 2.42
HDLBP-218ENST00000441124 FBXO31Q5XUX0 539 aaPredicted RBP30.18■■■□□ 2.42
HDLBP-218ENST00000441124 TNRQ92752 1358 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms