RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 CARMIL2Q6F5E8 1435 aa24.69■■□□□ 1.54
SATB2-204ENST00000440919 NEFLP07196 543 aa24.66■■□□□ 1.54
SATB2-204ENST00000440919 RAPGEF6Q8TEU7 1601 aa24.65■■□□□ 1.54
SATB2-204ENST00000440919 HSPA5P11021 654 aaKnown RBP24.64■■□□□ 1.54
SATB2-204ENST00000440919 WASHC2AQ641Q2 1341 aa24.64■■□□□ 1.53
SATB2-204ENST00000440919 MPHOSPH9Q99550 1183 aa24.63■■□□□ 1.53
SATB2-204ENST00000440919 ROCK1Q13464 1354 aa24.6■■□□□ 1.53
SATB2-204ENST00000440919 NUP153P49790 1475 aaKnown RBP24.6■■□□□ 1.53
SATB2-204ENST00000440919 DAPK1P53355 1430 aa24.59■■□□□ 1.53
SATB2-204ENST00000440919 DNMT1P26358 1616 aaKnown RBP24.59■■□□□ 1.53
SATB2-204ENST00000440919 CHD1O14646 1710 aa24.58■■□□□ 1.52
SATB2-204ENST00000440919 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
SATB2-204ENST00000440919 EIF4G2P78344 907 aaKnown RBP eCLIP24.57■■□□□ 1.526e-6■■■■□ 25.1
SATB2-204ENST00000440919 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
SATB2-204ENST00000440919 CDK11AQ9UQ88 783 aaPredicted RBP24.54■■□□□ 1.52
SATB2-204ENST00000440919 ABCC5O15440 1437 aa24.54■■□□□ 1.52
SATB2-204ENST00000440919 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
SATB2-204ENST00000440919 RPRD2Q5VT52 1461 aaKnown RBP24.53■■□□□ 1.52
SATB2-204ENST00000440919 ANKRD30BQ9BXX2 1392 aa24.53■■□□□ 1.52
SATB2-204ENST00000440919 FOXD1Q16676 465 aa24.52■■□□□ 1.52
SATB2-204ENST00000440919 PLB1Q6P1J6 1458 aa24.52■■□□□ 1.52
SATB2-204ENST00000440919 TEX14Q8IWB6 1497 aa24.51■■□□□ 1.51
SATB2-204ENST00000440919 NCOA1Q15788 1441 aa24.5■■□□□ 1.51
SATB2-204ENST00000440919 HNRNPUQ00839 825 aaKnown RBP eCLIP24.5■■□□□ 1.51
SATB2-204ENST00000440919 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
SATB2-204ENST00000440919 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
SATB2-204ENST00000440919 ZNF644Q9H582 1327 aaPredicted RBP24.45■■□□□ 1.51
SATB2-204ENST00000440919 ABCA8O94911 1581 aa24.43■■□□□ 1.5
SATB2-204ENST00000440919 C11orf95C9JLR9 678 aaPredicted RBP24.43■■□□□ 1.5
SATB2-204ENST00000440919 POLR1AO95602 1720 aaPredicted RBP24.43■■□□□ 1.5
SATB2-204ENST00000440919 NBPF8Q3BBV2 869 aa24.42■■□□□ 1.5
SATB2-204ENST00000440919 TROQ12816 1431 aaPredicted RBP24.41■■□□□ 1.5
SATB2-204ENST00000440919 SHROOM2Q13796 1616 aa24.4■■□□□ 1.5
SATB2-204ENST00000440919 SPATA31E1Q6ZUB1 1445 aa24.4■■□□□ 1.5
SATB2-204ENST00000440919 PTPRGP23470 1445 aa24.39■■□□□ 1.5
SATB2-204ENST00000440919 ANP32EQ9BTT0 268 aa24.39■■□□□ 1.49
SATB2-204ENST00000440919 SLC4A1APQ9BWU0 796 aaKnown RBP24.39■■□□□ 1.49
SATB2-204ENST00000440919 ITSN2Q9NZM3 1697 aa24.38■■□□□ 1.49
SATB2-204ENST00000440919 CAMSAP2Q08AD1 1489 aa24.38■■□□□ 1.49
SATB2-204ENST00000440919 ADGBQ8N7X0 1667 aa24.38■■□□□ 1.49
SATB2-204ENST00000440919 PRKRIP1Q9H875 184 aaPredicted RBP24.37■■□□□ 1.49
SATB2-204ENST00000440919 PZPP20742 1482 aa24.37■■□□□ 1.49
SATB2-204ENST00000440919 CCDC184Q52MB2 194 aa24.37■■□□□ 1.49
SATB2-204ENST00000440919 RBM19Q9Y4C8 960 aaKnown RBP24.36■■□□□ 1.49
SATB2-204ENST00000440919 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
SATB2-204ENST00000440919 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
SATB2-204ENST00000440919 ATP10BO94823 1461 aa24.32■■□□□ 1.48
SATB2-204ENST00000440919 GPATCH8Q9UKJ3 1502 aaKnown RBP24.31■■□□□ 1.48
SATB2-204ENST00000440919 ADGRL2O95490 1459 aa24.31■■□□□ 1.48
SATB2-204ENST00000440919 KIF7Q2M1P5 1343 aa24.31■■□□□ 1.48
SATB2-204ENST00000440919 PLEKHD1A6NEE1 506 aa24.31■■□□□ 1.48
SATB2-204ENST00000440919 KIF14Q15058 1648 aa24.3■■□□□ 1.48
SATB2-204ENST00000440919 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
SATB2-204ENST00000440919 CFDP1Q9UEE9 299 aaPredicted RBP24.29■■□□□ 1.48
SATB2-204ENST00000440919 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
SATB2-204ENST00000440919 KIAA1107Q9UPP5 1409 aa24.26■■□□□ 1.47
SATB2-204ENST00000440919 IRX6P78412 446 aaPredicted RBP24.26■■□□□ 1.47
SATB2-204ENST00000440919 MRS2Q9HD23 443 aa24.26■■□□□ 1.47
SATB2-204ENST00000440919 ERICH6BQ5W0A0 696 aa24.24■■□□□ 1.47
SATB2-204ENST00000440919 ZBED9Q6R2W3 1325 aa24.23■■□□□ 1.47
SATB2-204ENST00000440919 FAM9BQ8IZU0 186 aa24.23■■□□□ 1.47
SATB2-204ENST00000440919 ERCC6L2Q5T890 1561 aa24.21■■□□□ 1.47
SATB2-204ENST00000440919 BCORL1Q5H9F3 1711 aa24.19■■□□□ 1.46
SATB2-204ENST00000440919 ANKRD30AQ9BXX3 1397 aa24.19■■□□□ 1.46
SATB2-204ENST00000440919 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
SATB2-204ENST00000440919 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
SATB2-204ENST00000440919 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
SATB2-204ENST00000440919 USP47Q96K76 1375 aa24.16■■□□□ 1.46
SATB2-204ENST00000440919 KDM5CP41229 1560 aa24.16■■□□□ 1.46
SATB2-204ENST00000440919 ABCC10Q5T3U5 1492 aa24.16■■□□□ 1.46
SATB2-204ENST00000440919 ANKRD50Q9ULJ7 1429 aa24.15■■□□□ 1.46
SATB2-204ENST00000440919 PKD2Q13563 968 aa24.15■■□□□ 1.46
SATB2-204ENST00000440919 ABCC2Q92887 1545 aa24.14■■□□□ 1.46
SATB2-204ENST00000440919 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.45
SATB2-204ENST00000440919 PPP4R2Q9NY27 417 aa24.13■■□□□ 1.45
SATB2-204ENST00000440919 UHRF1BP1Q6BDS2 1440 aa24.11■■□□□ 1.45
SATB2-204ENST00000440919 ARID4BQ4LE39 1312 aaPredicted RBP24.09■■□□□ 1.45
SATB2-204ENST00000440919 KDM5DQ9BY66 1539 aa24.08■■□□□ 1.45
SATB2-204ENST00000440919 C9orf84Q5VXU9 1444 aa24.08■■□□□ 1.45
SATB2-204ENST00000440919 RALGAPBQ86X10 1494 aa24.08■■□□□ 1.45
SATB2-204ENST00000440919 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
SATB2-204ENST00000440919 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
SATB2-204ENST00000440919 UHRF1BP1LA0JNW5 1464 aa24.05■■□□□ 1.44
SATB2-204ENST00000440919 FANCIQ9NVI1 1328 aa24.05■■□□□ 1.44
SATB2-204ENST00000440919 NUP155O75694 1391 aa24.04■■□□□ 1.44
SATB2-204ENST00000440919 MSH5O43196 834 aa24.02■■□□□ 1.44
SATB2-204ENST00000440919 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
SATB2-204ENST00000440919 ROCK2O75116 1388 aaKnown RBP24■■□□□ 1.43
SATB2-204ENST00000440919 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
SATB2-204ENST00000440919 POLR3GLQ9BT43 218 aa23.98■■□□□ 1.43
SATB2-204ENST00000440919 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
SATB2-204ENST00000440919 ZCCHC11Q5TAX3 1644 aaKnown RBP23.97■■□□□ 1.43
SATB2-204ENST00000440919 B4GALNT3Q6L9W6 998 aa23.96■■□□□ 1.43
SATB2-204ENST00000440919 KIF15Q9NS87 1388 aa23.96■■□□□ 1.43
SATB2-204ENST00000440919 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
SATB2-204ENST00000440919 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
SATB2-204ENST00000440919 CDC42BPBQ9Y5S2 1711 aa23.95■■□□□ 1.42
SATB2-204ENST00000440919 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.42
SATB2-204ENST00000440919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.42
SATB2-204ENST00000440919 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms