RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 DAPK1P53355 1430 aa29.22■■■□□ 2.27
APTR-204ENST00000440088 WDR7Q9Y4E6 1490 aa29.21■■■□□ 2.27
APTR-204ENST00000440088 NPM1P06748 294 aaKnown RBP eCLIP29.2■■■□□ 2.26
APTR-204ENST00000440088 CDC42BPBQ9Y5S2 1711 aa29.19■■■□□ 2.26
APTR-204ENST00000440088 ABCC5O15440 1437 aa29.18■■■□□ 2.26
APTR-204ENST00000440088 DHX57Q6P158 1386 aaKnown RBP29.17■■■□□ 2.26
APTR-204ENST00000440088 MYO5CQ9NQX4 1742 aa29.17■■■□□ 2.26
APTR-204ENST00000440088 AKNAQ7Z591 1439 aa29.16■■■□□ 2.26
APTR-204ENST00000440088 CHIC2Q9UKJ5 165 aa29.16■■■□□ 2.26
APTR-204ENST00000440088 RIMBP3CA6NJZ7 1639 aa29.15■■■□□ 2.26
APTR-204ENST00000440088 RIMBP3BA6NNM3 1639 aa29.15■■■□□ 2.26
APTR-204ENST00000440088 RIMBP3Q9UFD9 1639 aa29.15■■■□□ 2.26
APTR-204ENST00000440088 NAIPQ13075 1403 aa29.15■■■□□ 2.26
APTR-204ENST00000440088 ASXL2Q76L83 1435 aa29.14■■■□□ 2.26
APTR-204ENST00000440088 ARHGAP5Q13017 1502 aa29.12■■■□□ 2.25
APTR-204ENST00000440088 ROCK1Q13464 1354 aa29.11■■■□□ 2.25
APTR-204ENST00000440088 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
APTR-204ENST00000440088 GCC2Q8IWJ2 1684 aa29.09■■■□□ 2.25
APTR-204ENST00000440088 RRP7BPQ9NSQ0 103 aa29.09■■■□□ 2.25
APTR-204ENST00000440088 SAMD9LQ8IVG5 1584 aa29.09■■■□□ 2.25
APTR-204ENST00000440088 PLCH2O75038 1416 aa29.09■■■□□ 2.25
APTR-204ENST00000440088 CROCC2H7BZ55 1655 aa29.08■■■□□ 2.25
APTR-204ENST00000440088 CYB5RLQ6IPT4 315 aa29.06■■■□□ 2.24
APTR-204ENST00000440088 ARHGEF5Q12774 1597 aa29.04■■■□□ 2.24
APTR-204ENST00000440088 ABCA9Q8IUA7 1624 aa29.03■■■□□ 2.24
APTR-204ENST00000440088 ARAP3Q8WWN8 1544 aa29.02■■■□□ 2.24
APTR-204ENST00000440088 MBD5Q9P267 1494 aa29.02■■■□□ 2.24
APTR-204ENST00000440088 ADGBQ8N7X0 1667 aa29.02■■■□□ 2.24
APTR-204ENST00000440088 PLEKHH2Q8IVE3 1493 aa29.01■■■□□ 2.24
APTR-204ENST00000440088 SHANK2Q9UPX8 1470 aa29.01■■■□□ 2.24
APTR-204ENST00000440088 HNRNPMP52272 730 aaKnown RBP eCLIP29■■■□□ 2.23
APTR-204ENST00000440088 RSPH4AQ5TD94 716 aa29■■■□□ 2.23
APTR-204ENST00000440088 EFCAB2Q5VUJ9 269 aa29■■■□□ 2.23
APTR-204ENST00000440088 ADGRL2O95490 1459 aa28.99■■■□□ 2.23
APTR-204ENST00000440088 KIAA1107Q9UPP5 1409 aa28.98■■■□□ 2.23
APTR-204ENST00000440088 CCDC141Q6ZP82 1450 aa28.98■■■□□ 2.23
APTR-204ENST00000440088 NCOA1Q15788 1441 aa28.97■■■□□ 2.23
APTR-204ENST00000440088 TSPY4P0CV99 314 aa28.97■■■□□ 2.23
APTR-204ENST00000440088 TSPY10P0CW01 314 aa28.97■■■□□ 2.23
APTR-204ENST00000440088 SYCP2Q9BX26 1530 aa28.97■■■□□ 2.23
APTR-204ENST00000440088 C9orf84Q5VXU9 1444 aa28.96■■■□□ 2.23
APTR-204ENST00000440088 ANKRD30AQ9BXX3 1397 aa28.95■■■□□ 2.23
APTR-204ENST00000440088 MAPKBP1O60336 1514 aa28.92■■■□□ 2.22
APTR-204ENST00000440088 KDM6BO15054 1643 aa28.91■■■□□ 2.22
APTR-204ENST00000440088 ACIN1Q9UKV3 1341 aaKnown RBP28.91■■■□□ 2.22
APTR-204ENST00000440088 ABCC1P33527 1531 aa28.89■■■□□ 2.22
APTR-204ENST00000440088 FANCAO15360 1455 aa28.87■■■□□ 2.21
APTR-204ENST00000440088 ARHGEF12Q9NZN5 1544 aa28.86■■■□□ 2.21
APTR-204ENST00000440088 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
APTR-204ENST00000440088 TRIM52Q96A61 297 aa28.81■■■□□ 2.2
APTR-204ENST00000440088 CD109Q6YHK3 1445 aa28.81■■■□□ 2.2
APTR-204ENST00000440088 ANKRD50Q9ULJ7 1429 aa28.79■■■□□ 2.2
APTR-204ENST00000440088 KIF15Q9NS87 1388 aa28.79■■■□□ 2.2
APTR-204ENST00000440088 TRAPPC8Q9Y2L5 1435 aa28.76■■■□□ 2.19
APTR-204ENST00000440088 ADGRL1O94910 1474 aa28.75■■■□□ 2.19
APTR-204ENST00000440088 CFAP74Q9C0B2 1584 aa28.74■■■□□ 2.19
APTR-204ENST00000440088 PLXNC1O60486 1568 aa28.73■■■□□ 2.19
APTR-204ENST00000440088 SCAPERQ9BY12 1400 aa28.7■■■□□ 2.19
APTR-204ENST00000440088 GLI2P10070 1586 aa28.7■■■□□ 2.18
APTR-204ENST00000440088 MPHOSPH9Q99550 1183 aa28.69■■■□□ 2.18
APTR-204ENST00000440088 AFAP1Q8N556 730 aa28.67■■■□□ 2.18
APTR-204ENST00000440088 RTEL1-TNFRSF6BF6WH68 1400 aa28.67■■■□□ 2.18
APTR-204ENST00000440088 SPAG9O60271 1321 aaKnown RBP28.66■■■□□ 2.18
APTR-204ENST00000440088 MAP3K4Q9Y6R4 1608 aa28.66■■■□□ 2.18
APTR-204ENST00000440088 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
APTR-204ENST00000440088 SIN3AQ96ST3 1273 aa28.63■■■□□ 2.17
APTR-204ENST00000440088 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
APTR-204ENST00000440088 DIP2BQ9P265 1576 aa28.62■■■□□ 2.17
APTR-204ENST00000440088 NEO1Q92859 1461 aa28.62■■■□□ 2.17
APTR-204ENST00000440088 ZFYVE16Q7Z3T8 1539 aa28.62■■■□□ 2.17
APTR-204ENST00000440088 SLC4A1APQ9BWU0 796 aaKnown RBP28.61■■■□□ 2.17
APTR-204ENST00000440088 NEUROD1Q13562 356 aa28.6■■■□□ 2.17
APTR-204ENST00000440088 PZPP20742 1482 aa28.6■■■□□ 2.17
APTR-204ENST00000440088 ZNF518AQ6AHZ1 1483 aa28.6■■■□□ 2.17
APTR-204ENST00000440088 FAM69CQ0P6D2 419 aa28.59■■■□□ 2.17
APTR-204ENST00000440088 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
APTR-204ENST00000440088 ATP7AQ04656 1500 aa28.57■■■□□ 2.16
APTR-204ENST00000440088 ERBINQ96RT1 1412 aa28.57■■■□□ 2.16
APTR-204ENST00000440088 TIMELESSQ9UNS1 1208 aa28.57■■■□□ 2.16
APTR-204ENST00000440088 NUP155O75694 1391 aa28.56■■■□□ 2.16
APTR-204ENST00000440088 KDM5DQ9BY66 1539 aa28.56■■■□□ 2.16
APTR-204ENST00000440088 POGZQ7Z3K3 1410 aa28.54■■■□□ 2.16
APTR-204ENST00000440088 KDM5CP41229 1560 aa28.5■■■□□ 2.15
APTR-204ENST00000440088 UNC13BO14795 1591 aa28.5■■■□□ 2.15
APTR-204ENST00000440088 MYT1LQ9UL68 1186 aa28.5■■■□□ 2.15
APTR-204ENST00000440088 FOXD1Q16676 465 aa28.49■■■□□ 2.15
APTR-204ENST00000440088 ANKRD30BQ9BXX2 1392 aa28.47■■■□□ 2.15
APTR-204ENST00000440088 KIDINS220Q9ULH0 1771 aa28.47■■■□□ 2.15
APTR-204ENST00000440088 TONSLQ96HA7 1378 aa28.45■■■□□ 2.14
APTR-204ENST00000440088 PKD2Q13563 968 aa28.45■■■□□ 2.14
APTR-204ENST00000440088 MLH3Q9UHC1 1453 aa28.44■■■□□ 2.14
APTR-204ENST00000440088 FAM135AQ9P2D6 1515 aa28.44■■■□□ 2.14
APTR-204ENST00000440088 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
APTR-204ENST00000440088 MAGI2Q86UL8 1455 aa28.42■■■□□ 2.14
APTR-204ENST00000440088 TEX14Q8IWB6 1497 aa28.42■■■□□ 2.14
APTR-204ENST00000440088 TSPOAP1O95153 1857 aa28.41■■■□□ 2.14
APTR-204ENST00000440088 KIF13AQ9H1H9 1805 aa28.41■■■□□ 2.14
APTR-204ENST00000440088 DHX29Q7Z478 1369 aaKnown RBP28.4■■■□□ 2.14
APTR-204ENST00000440088 PPRC1Q5VV67 1664 aaKnown RBP28.4■■■□□ 2.14
APTR-204ENST00000440088 IQGAP3Q86VI3 1631 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms