RNA–Protein interactions for RNA: ENST00000439673.6

TSC2-207, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,287 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-207ENST00000439673 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
TSC2-207ENST00000439673 CUX2O14529 1486 aa20.76■□□□□ 0.91
TSC2-207ENST00000439673 PTMSP20962 102 aa20.75■□□□□ 0.91
TSC2-207ENST00000439673 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
TSC2-207ENST00000439673 ARID4BQ4LE39 1312 aaPredicted RBP20.74■□□□□ 0.91
TSC2-207ENST00000439673 PKD2Q13563 968 aa20.71■□□□□ 0.91
TSC2-207ENST00000439673 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
TSC2-207ENST00000439673 GBP4Q96PP9 640 aa20.7■□□□□ 0.91
TSC2-207ENST00000439673 RWDD1Q9H446 243 aaPredicted RBP20.69■□□□□ 0.9
TSC2-207ENST00000439673 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
TSC2-207ENST00000439673 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
TSC2-207ENST00000439673 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
TSC2-207ENST00000439673 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
TSC2-207ENST00000439673 HDGFP51858 240 aaKnown RBP20.66■□□□□ 0.9
TSC2-207ENST00000439673 CALD1Q05682 793 aaKnown RBP20.65■□□□□ 0.9
TSC2-207ENST00000439673 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
TSC2-207ENST00000439673 SPRYD3Q8NCJ5 442 aa20.65■□□□□ 0.9
TSC2-207ENST00000439673 NAP1L2Q9ULW6 460 aaPredicted RBP20.65■□□□□ 0.9
TSC2-207ENST00000439673 LMOD2Q6P5Q4 547 aa20.64■□□□□ 0.89
TSC2-207ENST00000439673 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.89
TSC2-207ENST00000439673 IPO9Q96P70 1041 aaKnown RBP20.62■□□□□ 0.89
TSC2-207ENST00000439673 PDE3BQ13370 1112 aa20.62■□□□□ 0.89
TSC2-207ENST00000439673 PMFBP1Q8TBY8 1022 aa20.61■□□□□ 0.89
TSC2-207ENST00000439673 ROCK2O75116 1388 aaKnown RBP20.61■□□□□ 0.89
TSC2-207ENST00000439673 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
TSC2-207ENST00000439673 RTF1Q92541 710 aaKnown RBP20.6■□□□□ 0.89
TSC2-207ENST00000439673 HDGFL2Q7Z4V5 671 aaPredicted RBP20.6■□□□□ 0.89
TSC2-207ENST00000439673 DRC7Q8IY82 874 aa20.58■□□□□ 0.89
TSC2-207ENST00000439673 FOXD1Q16676 465 aa20.58■□□□□ 0.88
TSC2-207ENST00000439673 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.88
TSC2-207ENST00000439673 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
TSC2-207ENST00000439673 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.88
TSC2-207ENST00000439673 SLKQ9H2G2 1235 aaPredicted RBP20.57■□□□□ 0.88
TSC2-207ENST00000439673 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
TSC2-207ENST00000439673 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
TSC2-207ENST00000439673 NLRP13Q86W25 1043 aa20.56■□□□□ 0.88
TSC2-207ENST00000439673 NUP155O75694 1391 aa20.55■□□□□ 0.88
TSC2-207ENST00000439673 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
TSC2-207ENST00000439673 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
TSC2-207ENST00000439673 ITPRIPQ8IWB1 547 aa20.55■□□□□ 0.88
TSC2-207ENST00000439673 SYAP1Q96A49 352 aaPredicted RBP20.55■□□□□ 0.88
TSC2-207ENST00000439673 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
TSC2-207ENST00000439673 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
TSC2-207ENST00000439673 CHMP4AQ9BY43 222 aa20.53■□□□□ 0.88
TSC2-207ENST00000439673 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.87
TSC2-207ENST00000439673 EIF3AQ14152 1382 aaKnown RBP20.51■□□□□ 0.87
TSC2-207ENST00000439673 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
TSC2-207ENST00000439673 GOLGA6L3A6NEY3 463 aa20.51■□□□□ 0.87
TSC2-207ENST00000439673 L3MBTL2Q969R5 705 aa20.51■□□□□ 0.87
TSC2-207ENST00000439673 GZF1Q9H116 711 aaPredicted RBP20.5■□□□□ 0.87
TSC2-207ENST00000439673 CARMIL2Q6F5E8 1435 aa20.5■□□□□ 0.87
TSC2-207ENST00000439673 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
TSC2-207ENST00000439673 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
TSC2-207ENST00000439673 APBB1O00213 710 aa20.49■□□□□ 0.87
TSC2-207ENST00000439673 NPHP1O15259 732 aa20.48■□□□□ 0.87
TSC2-207ENST00000439673 SOX12O15370 315 aa20.48■□□□□ 0.87
TSC2-207ENST00000439673 TULP1O00294 542 aaPredicted RBP20.47■□□□□ 0.87
TSC2-207ENST00000439673 USP35Q9P2H5 1018 aa20.47■□□□□ 0.87
TSC2-207ENST00000439673 MFAP1P55081 439 aaKnown RBP20.46■□□□□ 0.87
TSC2-207ENST00000439673 SMC4Q9NTJ3 1288 aa20.46■□□□□ 0.87
TSC2-207ENST00000439673 GGT6Q6P531 493 aa20.45■□□□□ 0.86
TSC2-207ENST00000439673 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
TSC2-207ENST00000439673 STK26Q9P289 416 aa20.45■□□□□ 0.86
TSC2-207ENST00000439673 CENPJQ9HC77 1338 aaPredicted RBP20.44■□□□□ 0.86
TSC2-207ENST00000439673 HMMRO75330 724 aa20.44■□□□□ 0.86
TSC2-207ENST00000439673 GNL2Q13823 731 aaKnown RBP20.44■□□□□ 0.86
TSC2-207ENST00000439673 EFCAB2Q5VUJ9 269 aa20.44■□□□□ 0.86
TSC2-207ENST00000439673 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
TSC2-207ENST00000439673 STK31Q9BXU1 1019 aa20.41■□□□□ 0.86
TSC2-207ENST00000439673 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
TSC2-207ENST00000439673 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
TSC2-207ENST00000439673 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
TSC2-207ENST00000439673 SPAG9O60271 1321 aaKnown RBP20.39■□□□□ 0.85
TSC2-207ENST00000439673 CSPP1Q1MSJ5 1256 aa20.39■□□□□ 0.85
TSC2-207ENST00000439673 MYBBP1AQ9BQG0 1328 aaKnown RBP20.38■□□□□ 0.85
TSC2-207ENST00000439673 DHX57Q6P158 1386 aaKnown RBP20.37■□□□□ 0.85
TSC2-207ENST00000439673 CENPQQ7L2Z9 268 aaPredicted RBP20.37■□□□□ 0.85
TSC2-207ENST00000439673 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
TSC2-207ENST00000439673 CLUAP1Q96AJ1 413 aa20.36■□□□□ 0.85
TSC2-207ENST00000439673 GPATCH3Q96I76 525 aa20.36■□□□□ 0.85
TSC2-207ENST00000439673 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
TSC2-207ENST00000439673 TPM4P67936 248 aa20.35■□□□□ 0.85
TSC2-207ENST00000439673 MLECQ14165 292 aa20.35■□□□□ 0.85
TSC2-207ENST00000439673 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.85
TSC2-207ENST00000439673 CCDC34Q96HJ3 373 aa20.33■□□□□ 0.85
TSC2-207ENST00000439673 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.84
TSC2-207ENST00000439673 ST18O60284 1047 aa20.33■□□□□ 0.84
TSC2-207ENST00000439673 FAM161AQ3B820 660 aa20.32■□□□□ 0.84
TSC2-207ENST00000439673 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
TSC2-207ENST00000439673 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
TSC2-207ENST00000439673 PHF14O94880 888 aa20.32■□□□□ 0.84
TSC2-207ENST00000439673 PDE4AP27815 886 aa20.32■□□□□ 0.84
TSC2-207ENST00000439673 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
TSC2-207ENST00000439673 TRIM6-TRIM34B2RNG4 842 aa20.31■□□□□ 0.84
TSC2-207ENST00000439673 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
TSC2-207ENST00000439673 PDS5BQ9NTI5 1447 aa20.3■□□□□ 0.84
TSC2-207ENST00000439673 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
TSC2-207ENST00000439673 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
TSC2-207ENST00000439673 KIF3BO15066 747 aa20.27■□□□□ 0.84
TSC2-207ENST00000439673 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms