RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
SPEN-202ENST00000438066 TRIM66O15016 1216 aa11.06□□□□□ -0.64
SPEN-202ENST00000438066 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
SPEN-202ENST00000438066 PDE4DQ08499 809 aa11.06□□□□□ -0.64
SPEN-202ENST00000438066 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
SPEN-202ENST00000438066 PPP1R15BQ5SWA1 713 aa11.02□□□□□ -0.65
SPEN-202ENST00000438066 DPYSL4O14531 572 aa11.01□□□□□ -0.65
SPEN-202ENST00000438066 TMEM106CQ9BVX2 250 aa10.99□□□□□ -0.65
SPEN-202ENST00000438066 ARID3AQ99856 593 aa10.98□□□□□ -0.65
SPEN-202ENST00000438066 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
SPEN-202ENST00000438066 FAM117AQ9C073 453 aa10.98□□□□□ -0.65
SPEN-202ENST00000438066 GPHNQ9NQX3 736 aaPredicted RBP10.98□□□□□ -0.65
SPEN-202ENST00000438066 MKRN3Q13064 507 aaKnown RBP10.97□□□□□ -0.65
SPEN-202ENST00000438066 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
SPEN-202ENST00000438066 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
SPEN-202ENST00000438066 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
SPEN-202ENST00000438066 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
SPEN-202ENST00000438066 PDIA6Q15084 440 aa10.94□□□□□ -0.66
SPEN-202ENST00000438066 MYO15BQ96JP2 1530 aa10.93□□□□□ -0.66
SPEN-202ENST00000438066 SPDYE16A6NNV3 312 aaPredicted RBP10.92□□□□□ -0.66
SPEN-202ENST00000438066 GPR37O15354 613 aa10.92□□□□□ -0.66
SPEN-202ENST00000438066 SHROOM4Q9ULL8 1493 aa10.92□□□□□ -0.66
SPEN-202ENST00000438066 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
SPEN-202ENST00000438066 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
SPEN-202ENST00000438066 DSG2Q14126 1118 aa10.91□□□□□ -0.66
SPEN-202ENST00000438066 C1orf115Q9H7X2 142 aa10.9□□□□□ -0.66
SPEN-202ENST00000438066 PLEKHG3A1L390 1219 aa10.89□□□□□ -0.67
SPEN-202ENST00000438066 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
SPEN-202ENST00000438066 CD44P16070 742 aaKnown RBP10.88□□□□□ -0.67
SPEN-202ENST00000438066 MINK1Q8N4C8 1332 aaPredicted RBP10.87□□□□□ -0.67
SPEN-202ENST00000438066 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
SPEN-202ENST00000438066 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
SPEN-202ENST00000438066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.679e-8■□□□□ 8.9
SPEN-202ENST00000438066 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
SPEN-202ENST00000438066 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
SPEN-202ENST00000438066 MAP2K5Q13163 448 aa10.85□□□□□ -0.67
SPEN-202ENST00000438066 ABCC9O60706 1549 aa10.85□□□□□ -0.67
SPEN-202ENST00000438066 PARP9Q8IXQ6 854 aa10.84□□□□□ -0.67
SPEN-202ENST00000438066 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
SPEN-202ENST00000438066 APBB1O00213 710 aa10.84□□□□□ -0.67
SPEN-202ENST00000438066 IRF6O14896 467 aa10.84□□□□□ -0.67
SPEN-202ENST00000438066 PIP4P2Q8N4L2 257 aa10.84□□□□□ -0.67
SPEN-202ENST00000438066 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
SPEN-202ENST00000438066 ILDR1Q86SU0 546 aaPredicted RBP10.82□□□□□ -0.68
SPEN-202ENST00000438066 HRCP23327 699 aa10.81□□□□□ -0.68
SPEN-202ENST00000438066 FOXK1P85037 733 aa10.81□□□□□ -0.68
SPEN-202ENST00000438066 AMHR2Q16671 573 aa10.81□□□□□ -0.68
SPEN-202ENST00000438066 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
SPEN-202ENST00000438066 NACADO15069 1562 aa10.8□□□□□ -0.68
SPEN-202ENST00000438066 RANGAP1P46060 587 aaPredicted RBP10.8□□□□□ -0.68
SPEN-202ENST00000438066 FLIIQ13045 1269 aa10.8□□□□□ -0.68
SPEN-202ENST00000438066 GNPATO15228 680 aa10.78□□□□□ -0.68
SPEN-202ENST00000438066 PLPP6Q8IY26 295 aa10.78□□□□□ -0.68
SPEN-202ENST00000438066 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
SPEN-202ENST00000438066 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
SPEN-202ENST00000438066 FECHP22830 423 aa10.78□□□□□ -0.68
SPEN-202ENST00000438066 TTLL12Q14166 644 aaPredicted RBP10.78□□□□□ -0.68
SPEN-202ENST00000438066 MAP3K9P80192 1104 aa10.77□□□□□ -0.69
SPEN-202ENST00000438066 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
SPEN-202ENST00000438066 OSBPP22059 807 aa10.75□□□□□ -0.69
SPEN-202ENST00000438066 TIE1P35590 1138 aa10.74□□□□□ -0.69
SPEN-202ENST00000438066 HIC1Q14526 733 aa10.74□□□□□ -0.69
SPEN-202ENST00000438066 C2orf72A6NCS6 295 aa10.72□□□□□ -0.69
SPEN-202ENST00000438066 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
SPEN-202ENST00000438066 FCHSD2O94868 740 aa10.72□□□□□ -0.69
SPEN-202ENST00000438066 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
SPEN-202ENST00000438066 DDX12PQ92771 950 aa10.72□□□□□ -0.69
SPEN-202ENST00000438066 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.694e-7■■■□□ 15.4
SPEN-202ENST00000438066 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
SPEN-202ENST00000438066 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
SPEN-202ENST00000438066 SCRIBQ14160 1630 aa10.71□□□□□ -0.7
SPEN-202ENST00000438066 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
SPEN-202ENST00000438066 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
SPEN-202ENST00000438066 MS4A1P11836 297 aa10.69□□□□□ -0.7
SPEN-202ENST00000438066 PCMTD1Q96MG8 357 aaPredicted RBP10.68□□□□□ -0.7
SPEN-202ENST00000438066 RB1CC1Q8TDY2 1594 aa10.67□□□□□ -0.7
SPEN-202ENST00000438066 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
SPEN-202ENST00000438066 KIF3CO14782 793 aa10.67□□□□□ -0.7
SPEN-202ENST00000438066 PDCD7Q8N8D1 485 aaKnown RBP10.67□□□□□ -0.7
SPEN-202ENST00000438066 A6NJR5 290 aa10.66□□□□□ -0.7
SPEN-202ENST00000438066 TRAK2O60296 914 aa10.66□□□□□ -0.7
SPEN-202ENST00000438066 PDIA4P13667 645 aaKnown RBP10.66□□□□□ -0.7
SPEN-202ENST00000438066 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
SPEN-202ENST00000438066 PTGDRQ13258 359 aa10.65□□□□□ -0.7
SPEN-202ENST00000438066 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
SPEN-202ENST00000438066 REPIN1Q9BWE0 567 aaKnown RBP10.65□□□□□ -0.7
SPEN-202ENST00000438066 PTGER2P43116 358 aa10.64□□□□□ -0.71
SPEN-202ENST00000438066 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
SPEN-202ENST00000438066 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
SPEN-202ENST00000438066 MCM6Q14566 821 aa10.61□□□□□ -0.71
SPEN-202ENST00000438066 G3V3G9 751 aa10.61□□□□□ -0.71
SPEN-202ENST00000438066 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
SPEN-202ENST00000438066 ZBTB7CA1YPR0 619 aa10.59□□□□□ -0.71
SPEN-202ENST00000438066 TBC1D12O60347 775 aa10.58□□□□□ -0.72
SPEN-202ENST00000438066 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
SPEN-202ENST00000438066 EVI5O60447 810 aa10.58□□□□□ -0.72
SPEN-202ENST00000438066 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
SPEN-202ENST00000438066 ZNF777Q9ULD5 760 aaPredicted RBP10.57□□□□□ -0.72
SPEN-202ENST00000438066 ATP1B4Q9UN42 357 aaPredicted RBP10.57□□□□□ -0.72
SPEN-202ENST00000438066 C19orf67A6NJJ6 358 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms