RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 ARHGAP35Q9NRY4 1499 aa34.18■■■■□ 3.06
LMBR1-210ENST00000434503 HECW1Q76N89 1606 aa34.18■■■■□ 3.06
LMBR1-210ENST00000434503 SIGLEC1Q9BZZ2 1709 aa34.16■■■■□ 3.06
LMBR1-210ENST00000434503 CDK11AQ9UQ88 783 aaPredicted RBP34.13■■■■□ 3.05
LMBR1-210ENST00000434503 FBXO41Q8TF61 875 aa34.12■■■■□ 3.05
LMBR1-210ENST00000434503 EFCAB2Q5VUJ9 269 aa34.1■■■■□ 3.05
LMBR1-210ENST00000434503 MYO5CQ9NQX4 1742 aa34.1■■■■□ 3.05
LMBR1-210ENST00000434503 MLECQ14165 292 aa34.06■■■■□ 3.04
LMBR1-210ENST00000434503 PLPPR3Q6T4P5 718 aa34.06■■■■□ 3.04
LMBR1-210ENST00000434503 KIF14Q15058 1648 aa34.05■■■■□ 3.04
LMBR1-210ENST00000434503 ATP10AO60312 1499 aa34.02■■■■□ 3.04
LMBR1-210ENST00000434503 TROQ12816 1431 aaPredicted RBP34.02■■■■□ 3.04
LMBR1-210ENST00000434503 HSPA2P54652 639 aa34.01■■■■□ 3.03
LMBR1-210ENST00000434503 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
LMBR1-210ENST00000434503 C9orf84Q5VXU9 1444 aa33.97■■■■□ 3.03
LMBR1-210ENST00000434503 LRRIQ1Q96JM4 1722 aa33.97■■■■□ 3.03
LMBR1-210ENST00000434503 CLIP1P30622 1438 aa33.96■■■■□ 3.03
LMBR1-210ENST00000434503 ARHGAP5Q13017 1502 aa33.94■■■■□ 3.02
LMBR1-210ENST00000434503 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
LMBR1-210ENST00000434503 ZNF518AQ6AHZ1 1483 aa33.94■■■■□ 3.02
LMBR1-210ENST00000434503 AFAP1Q8N556 730 aa33.91■■■■□ 3.02
LMBR1-210ENST00000434503 KDM5CP41229 1560 aa33.89■■■■□ 3.02
LMBR1-210ENST00000434503 CDC42BPBQ9Y5S2 1711 aa33.85■■■■□ 3.01
LMBR1-210ENST00000434503 CASKIN1Q8WXD9 1431 aa33.82■■■■□ 3
LMBR1-210ENST00000434503 MYT1LQ9UL68 1186 aa33.82■■■■□ 3
LMBR1-210ENST00000434503 CEBPAP49715 358 aaPredicted RBP33.81■■■■□ 3
LMBR1-210ENST00000434503 CCDC18Q5T9S5 1454 aa33.8■■■■□ 3
LMBR1-210ENST00000434503 DIP2CQ9Y2E4 1556 aa33.79■■■■□ 3
LMBR1-210ENST00000434503 PREX2Q70Z35 1606 aa33.78■■■■□ 3
LMBR1-210ENST00000434503 PREX1Q8TCU6 1659 aa33.77■■■■□ 3
LMBR1-210ENST00000434503 MLH3Q9UHC1 1453 aa33.76■■■■□ 3
LMBR1-210ENST00000434503 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
LMBR1-210ENST00000434503 TRAPPC8Q9Y2L5 1435 aa33.73■■■□□ 2.99
LMBR1-210ENST00000434503 ABCA6Q8N139 1617 aa33.73■■■□□ 2.99
LMBR1-210ENST00000434503 ABCC1P33527 1531 aa33.73■■■□□ 2.99
LMBR1-210ENST00000434503 ITSN2Q9NZM3 1697 aa33.69■■■□□ 2.98
LMBR1-210ENST00000434503 CERKQ8TCT0 537 aa33.69■■■□□ 2.98
LMBR1-210ENST00000434503 CDC42BPAQ5VT25 1732 aa33.67■■■□□ 2.98
LMBR1-210ENST00000434503 SETD1BQ9UPS6 1966 aaKnown RBP33.67■■■□□ 2.98
LMBR1-210ENST00000434503 FYCO1Q9BQS8 1478 aa33.66■■■□□ 2.98
LMBR1-210ENST00000434503 AGLP35573 1532 aa33.65■■■□□ 2.98
LMBR1-210ENST00000434503 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
LMBR1-210ENST00000434503 KIDINS220Q9ULH0 1771 aa33.62■■■□□ 2.97
LMBR1-210ENST00000434503 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
LMBR1-210ENST00000434503 C3P01024 1663 aa33.59■■■□□ 2.97
LMBR1-210ENST00000434503 ESF1Q9H501 851 aaKnown RBP33.59■■■□□ 2.97
LMBR1-210ENST00000434503 DMRT2Q9Y5R5 561 aa33.58■■■□□ 2.97
LMBR1-210ENST00000434503 ZNF777Q9ULD5 760 aaPredicted RBP33.56■■■□□ 2.96
LMBR1-210ENST00000434503 SAMD9LQ8IVG5 1584 aa33.54■■■□□ 2.96
LMBR1-210ENST00000434503 GPATCH8Q9UKJ3 1502 aaKnown RBP33.53■■■□□ 2.96
LMBR1-210ENST00000434503 CNTLNQ9NXG0 1405 aa33.49■■■□□ 2.95
LMBR1-210ENST00000434503 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
LMBR1-210ENST00000434503 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.951e-6■■■■■ 29.3
LMBR1-210ENST00000434503 SPAG9O60271 1321 aaKnown RBP33.47■■■□□ 2.95
LMBR1-210ENST00000434503 CFDP1Q9UEE9 299 aaPredicted RBP33.43■■■□□ 2.94
LMBR1-210ENST00000434503 KIAA1107Q9UPP5 1409 aa33.42■■■□□ 2.94
LMBR1-210ENST00000434503 PTPRTO14522 1441 aa33.41■■■□□ 2.94
LMBR1-210ENST00000434503 PLEKHH2Q8IVE3 1493 aa33.4■■■□□ 2.94
LMBR1-210ENST00000434503 CCNB3Q8WWL7 1395 aa33.39■■■□□ 2.94
LMBR1-210ENST00000434503 SUPT6HQ7KZ85 1726 aaKnown RBP33.39■■■□□ 2.94
LMBR1-210ENST00000434503 ATP7AQ04656 1500 aa33.38■■■□□ 2.93
LMBR1-210ENST00000434503 MROH2AA6NES4 1674 aa33.38■■■□□ 2.93
LMBR1-210ENST00000434503 ZMYM3Q14202 1370 aa33.35■■■□□ 2.93
LMBR1-210ENST00000434503 MTUS2Q5JR59 1369 aa33.35■■■□□ 2.93
LMBR1-210ENST00000434503 NPATQ14207 1427 aa33.35■■■□□ 2.93
LMBR1-210ENST00000434503 INO80Q9ULG1 1556 aaPredicted RBP33.34■■■□□ 2.93
LMBR1-210ENST00000434503 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
LMBR1-210ENST00000434503 A2MP01023 1474 aa33.31■■■□□ 2.92
LMBR1-210ENST00000434503 NCOA1Q15788 1441 aa33.31■■■□□ 2.92
LMBR1-210ENST00000434503 CLTCQ00610 1675 aaKnown RBP33.27■■■□□ 2.92
LMBR1-210ENST00000434503 ZNF644Q9H582 1327 aaPredicted RBP33.25■■■□□ 2.91
LMBR1-210ENST00000434503 CAMSAP1Q5T5Y3 1602 aa33.24■■■□□ 2.91
LMBR1-210ENST00000434503 TIAM1Q13009 1591 aa33.24■■■□□ 2.91
LMBR1-210ENST00000434503 LTBP4Q8N2S1 1624 aa33.24■■■□□ 2.91
LMBR1-210ENST00000434503 GGT6Q6P531 493 aa33.23■■■□□ 2.91
LMBR1-210ENST00000434503 ADGBQ8N7X0 1667 aa33.21■■■□□ 2.91
LMBR1-210ENST00000434503 EHBP1L1Q8N3D4 1523 aa33.21■■■□□ 2.91
LMBR1-210ENST00000434503 MBD5Q9P267 1494 aa33.19■■■□□ 2.9
LMBR1-210ENST00000434503 PPP6R1Q9UPN7 881 aa33.18■■■□□ 2.9
LMBR1-210ENST00000434503 PTPRKQ15262 1439 aa33.18■■■□□ 2.9
LMBR1-210ENST00000434503 CEP162Q5TB80 1403 aa33.17■■■□□ 2.9
LMBR1-210ENST00000434503 MYO3AQ8NEV4 1616 aa33.15■■■□□ 2.9
LMBR1-210ENST00000434503 NCKAP5LQ9HCH0 1330 aa33.15■■■□□ 2.9
LMBR1-210ENST00000434503 ZNF142P52746 1687 aaPredicted RBP33.14■■■□□ 2.9
LMBR1-210ENST00000434503 RTEL1-TNFRSF6BF6WH68 1400 aa33.14■■■□□ 2.9
LMBR1-210ENST00000434503 IQSEC2Q5JU85 1478 aa33.13■■■□□ 2.89
LMBR1-210ENST00000434503 CEP170BQ9Y4F5 1589 aaPredicted RBP33.1■■■□□ 2.89
LMBR1-210ENST00000434503 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
LMBR1-210ENST00000434503 DHX29Q7Z478 1369 aaKnown RBP33.09■■■□□ 2.89
LMBR1-210ENST00000434503 PKD2Q13563 968 aa33.08■■■□□ 2.89
LMBR1-210ENST00000434503 DISP3Q9P2K9 1392 aa33.06■■■□□ 2.88
LMBR1-210ENST00000434503 LOC105371045A0A1W2PR82 267 aa33.05■■■□□ 2.88
LMBR1-210ENST00000434503 TCOF1Q13428 1488 aaKnown RBP33.04■■■□□ 2.88
LMBR1-210ENST00000434503 ZNF335Q9H4Z2 1342 aaPredicted RBP33.03■■■□□ 2.88
LMBR1-210ENST00000434503 NCOA2Q15596 1464 aa33.03■■■□□ 2.88
LMBR1-210ENST00000434503 CCDC141Q6ZP82 1450 aa33.01■■■□□ 2.88
LMBR1-210ENST00000434503 RSPH4AQ5TD94 716 aa33■■■□□ 2.87
LMBR1-210ENST00000434503 CAMSAP2Q08AD1 1489 aa32.99■■■□□ 2.87
LMBR1-210ENST00000434503 KIF3BO15066 747 aa32.99■■■□□ 2.87
LMBR1-210ENST00000434503 A2ML1A8K2U0 1454 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms