RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 SLC39A7Q92504 469 aa18.8■□□□□ 0.6
LINC01090-202ENST00000434418 METRNQ9UJH8 293 aa18.79■□□□□ 0.6
LINC01090-202ENST00000434418 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
LINC01090-202ENST00000434418 ILDR1Q86SU0 546 aaPredicted RBP18.78■□□□□ 0.6
LINC01090-202ENST00000434418 COLQQ9Y215 455 aaPredicted RBP18.78■□□□□ 0.6
LINC01090-202ENST00000434418 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
LINC01090-202ENST00000434418 PDCD7Q8N8D1 485 aaKnown RBP18.76■□□□□ 0.59
LINC01090-202ENST00000434418 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
LINC01090-202ENST00000434418 PPP1R37O75864 691 aa18.74■□□□□ 0.59
LINC01090-202ENST00000434418 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
LINC01090-202ENST00000434418 C7P10643 843 aa18.73■□□□□ 0.59
LINC01090-202ENST00000434418 DPY19L2Q6NUT2 758 aa18.73■□□□□ 0.59
LINC01090-202ENST00000434418 PLCG2P16885 1265 aa18.72■□□□□ 0.59
LINC01090-202ENST00000434418 OCEL1Q9H607 264 aa18.71■□□□□ 0.59
LINC01090-202ENST00000434418 RYDENQ9NUL5 291 aaKnown RBP18.71■□□□□ 0.59
LINC01090-202ENST00000434418 SEC24BO95487 1268 aa18.7■□□□□ 0.58
LINC01090-202ENST00000434418 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
LINC01090-202ENST00000434418 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
LINC01090-202ENST00000434418 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
LINC01090-202ENST00000434418 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
LINC01090-202ENST00000434418 TSHZ2Q9NRE2 1034 aa18.6■□□□□ 0.57
LINC01090-202ENST00000434418 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
LINC01090-202ENST00000434418 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
LINC01090-202ENST00000434418 POTEB2H3BUK9 544 aa18.51■□□□□ 0.55
LINC01090-202ENST00000434418 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
LINC01090-202ENST00000434418 CADPS2Q86UW7 1296 aa18.49■□□□□ 0.55
LINC01090-202ENST00000434418 BOLA1Q9Y3E2 137 aa18.49■□□□□ 0.55
LINC01090-202ENST00000434418 WDR62O43379 1518 aa18.48■□□□□ 0.55
LINC01090-202ENST00000434418 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
LINC01090-202ENST00000434418 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
LINC01090-202ENST00000434418 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
LINC01090-202ENST00000434418 CFTRP13569 1480 aa18.45■□□□□ 0.54
LINC01090-202ENST00000434418 POTEJP0CG39 1038 aa18.44■□□□□ 0.54
LINC01090-202ENST00000434418 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
LINC01090-202ENST00000434418 TMEM121BQ9BXQ6 578 aaPredicted RBP18.42■□□□□ 0.54
LINC01090-202ENST00000434418 G3V3G9 751 aa18.41■□□□□ 0.54
LINC01090-202ENST00000434418 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
LINC01090-202ENST00000434418 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
LINC01090-202ENST00000434418 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
LINC01090-202ENST00000434418 KDM2AQ9Y2K7 1162 aa18.31■□□□□ 0.52
LINC01090-202ENST00000434418 NCKAP5LQ9HCH0 1330 aa18.3■□□□□ 0.52
LINC01090-202ENST00000434418 TMEM92Q6UXU6 159 aa18.29■□□□□ 0.52
LINC01090-202ENST00000434418 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
LINC01090-202ENST00000434418 CRISPLD2Q9H0B8 497 aa18.25■□□□□ 0.51
LINC01090-202ENST00000434418 VSIG10Q8N0Z9 540 aa18.22■□□□□ 0.51
LINC01090-202ENST00000434418 LHX8Q68G74 356 aa18.21■□□□□ 0.51
LINC01090-202ENST00000434418 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.21■□□□□ 0.51
LINC01090-202ENST00000434418 C2orf72A6NCS6 295 aa18.19■□□□□ 0.5
LINC01090-202ENST00000434418 LARP6Q9BRS8 491 aaKnown RBP18.18■□□□□ 0.5
LINC01090-202ENST00000434418 KIF3CO14782 793 aa18.17■□□□□ 0.5
LINC01090-202ENST00000434418 TMC2Q8TDI7 906 aa18.17■□□□□ 0.5
LINC01090-202ENST00000434418 PDE4AP27815 886 aa18.16■□□□□ 0.5
LINC01090-202ENST00000434418 SCUBE2Q9NQ36 999 aa18.16■□□□□ 0.5
LINC01090-202ENST00000434418 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
LINC01090-202ENST00000434418 OTUD5Q96G74 571 aa18.13■□□□□ 0.49
LINC01090-202ENST00000434418 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
LINC01090-202ENST00000434418 MAMSTRQ6ZN01 415 aa18.12■□□□□ 0.49
LINC01090-202ENST00000434418 DSG2Q14126 1118 aa18.11■□□□□ 0.49
LINC01090-202ENST00000434418 MFSD10Q14728 455 aa18.11■□□□□ 0.49
LINC01090-202ENST00000434418 SLAIN1Q8ND83 568 aa18.09■□□□□ 0.49
LINC01090-202ENST00000434418 DDX27Q96GQ7 796 aaKnown RBP18.09■□□□□ 0.49
LINC01090-202ENST00000434418 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.49
LINC01090-202ENST00000434418 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
LINC01090-202ENST00000434418 PPP1R15BQ5SWA1 713 aa18.07■□□□□ 0.48
LINC01090-202ENST00000434418 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
LINC01090-202ENST00000434418 FOXK1P85037 733 aa18.05■□□□□ 0.48
LINC01090-202ENST00000434418 WDR70Q9NW82 654 aa18.05■□□□□ 0.48
LINC01090-202ENST00000434418 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
LINC01090-202ENST00000434418 PLPP6Q8IY26 295 aa18.02■□□□□ 0.48
LINC01090-202ENST00000434418 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
LINC01090-202ENST00000434418 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
LINC01090-202ENST00000434418 KCNV2Q8TDN2 545 aa17.94■□□□□ 0.46
LINC01090-202ENST00000434418 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
LINC01090-202ENST00000434418 E2F4Q16254 413 aa17.92■□□□□ 0.46
LINC01090-202ENST00000434418 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC01090-202ENST00000434418 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
LINC01090-202ENST00000434418 CAMK2BQ13554 666 aa17.9■□□□□ 0.46
LINC01090-202ENST00000434418 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.45
LINC01090-202ENST00000434418 EMILIN3Q9NT22 766 aa17.89■□□□□ 0.45
LINC01090-202ENST00000434418 CHD1O14646 1710 aa17.87■□□□□ 0.45
LINC01090-202ENST00000434418 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
LINC01090-202ENST00000434418 CUX1P39880 1505 aa17.86■□□□□ 0.45
LINC01090-202ENST00000434418 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
LINC01090-202ENST00000434418 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
LINC01090-202ENST00000434418 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
LINC01090-202ENST00000434418 HOXB3P14651 431 aaPredicted RBP17.85■□□□□ 0.45
LINC01090-202ENST00000434418 SOGA1O94964 1423 aa17.84■□□□□ 0.45
LINC01090-202ENST00000434418 UPF1Q92900 1129 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC01090-202ENST00000434418 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
LINC01090-202ENST00000434418 P3H3Q8IVL6 736 aa17.81■□□□□ 0.44
LINC01090-202ENST00000434418 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
LINC01090-202ENST00000434418 DPYSL4O14531 572 aa17.77■□□□□ 0.44
LINC01090-202ENST00000434418 OXER1Q8TDS5 423 aa17.77■□□□□ 0.44
LINC01090-202ENST00000434418 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
LINC01090-202ENST00000434418 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
LINC01090-202ENST00000434418 SLC34A2O95436 690 aa17.74■□□□□ 0.43
LINC01090-202ENST00000434418 DOK7Q18PE1 504 aa17.74■□□□□ 0.43
LINC01090-202ENST00000434418 PTCD2Q8WV60 388 aaKnown RBP17.72■□□□□ 0.43
LINC01090-202ENST00000434418 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
LINC01090-202ENST00000434418 PCDHGA4Q9Y5G9 962 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms