RNA–Protein interactions for RNA: ENST00000430278.5

LMBR1-205, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-205ENST00000430278 HECW1Q76N89 1606 aa34.18■■■■□ 3.06
LMBR1-205ENST00000430278 SIGLEC1Q9BZZ2 1709 aa34.16■■■■□ 3.06
LMBR1-205ENST00000430278 CDK11AQ9UQ88 783 aaPredicted RBP34.13■■■■□ 3.05
LMBR1-205ENST00000430278 FBXO41Q8TF61 875 aa34.12■■■■□ 3.05
LMBR1-205ENST00000430278 EFCAB2Q5VUJ9 269 aa34.1■■■■□ 3.05
LMBR1-205ENST00000430278 CHIC1Q5VXU3 224 aa34.1■■■■□ 3.05
LMBR1-205ENST00000430278 MYO5CQ9NQX4 1742 aa34.1■■■■□ 3.05
LMBR1-205ENST00000430278 MLECQ14165 292 aa34.06■■■■□ 3.04
LMBR1-205ENST00000430278 PLPPR3Q6T4P5 718 aa34.06■■■■□ 3.04
LMBR1-205ENST00000430278 KIF14Q15058 1648 aa34.05■■■■□ 3.04
LMBR1-205ENST00000430278 ATP10AO60312 1499 aa34.02■■■■□ 3.04
LMBR1-205ENST00000430278 TROQ12816 1431 aaPredicted RBP34.02■■■■□ 3.04
LMBR1-205ENST00000430278 HSPA2P54652 639 aa34.01■■■■□ 3.03
LMBR1-205ENST00000430278 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
LMBR1-205ENST00000430278 C9orf84Q5VXU9 1444 aa33.97■■■■□ 3.03
LMBR1-205ENST00000430278 LRRIQ1Q96JM4 1722 aa33.97■■■■□ 3.03
LMBR1-205ENST00000430278 CLIP1P30622 1438 aa33.96■■■■□ 3.03
LMBR1-205ENST00000430278 ARHGAP5Q13017 1502 aa33.94■■■■□ 3.02
LMBR1-205ENST00000430278 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
LMBR1-205ENST00000430278 ZNF518AQ6AHZ1 1483 aa33.94■■■■□ 3.02
LMBR1-205ENST00000430278 AFAP1Q8N556 730 aa33.91■■■■□ 3.02
LMBR1-205ENST00000430278 KDM5CP41229 1560 aa33.89■■■■□ 3.02
LMBR1-205ENST00000430278 CDC42BPBQ9Y5S2 1711 aa33.85■■■■□ 3.01
LMBR1-205ENST00000430278 CASKIN1Q8WXD9 1431 aa33.82■■■■□ 3
LMBR1-205ENST00000430278 MYT1LQ9UL68 1186 aa33.82■■■■□ 3
LMBR1-205ENST00000430278 CEBPAP49715 358 aaPredicted RBP33.81■■■■□ 3
LMBR1-205ENST00000430278 CCDC18Q5T9S5 1454 aa33.8■■■■□ 3
LMBR1-205ENST00000430278 DIP2CQ9Y2E4 1556 aa33.79■■■■□ 3
LMBR1-205ENST00000430278 PREX2Q70Z35 1606 aa33.78■■■■□ 3
LMBR1-205ENST00000430278 PREX1Q8TCU6 1659 aa33.77■■■■□ 3
LMBR1-205ENST00000430278 MLH3Q9UHC1 1453 aa33.76■■■■□ 3
LMBR1-205ENST00000430278 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
LMBR1-205ENST00000430278 TRAPPC8Q9Y2L5 1435 aa33.73■■■□□ 2.99
LMBR1-205ENST00000430278 ABCA6Q8N139 1617 aa33.73■■■□□ 2.99
LMBR1-205ENST00000430278 ABCC1P33527 1531 aa33.73■■■□□ 2.99
LMBR1-205ENST00000430278 ITSN2Q9NZM3 1697 aa33.69■■■□□ 2.98
LMBR1-205ENST00000430278 CERKQ8TCT0 537 aa33.69■■■□□ 2.98
LMBR1-205ENST00000430278 CDC42BPAQ5VT25 1732 aa33.67■■■□□ 2.98
LMBR1-205ENST00000430278 SETD1BQ9UPS6 1966 aaKnown RBP33.67■■■□□ 2.98
LMBR1-205ENST00000430278 FYCO1Q9BQS8 1478 aa33.66■■■□□ 2.98
LMBR1-205ENST00000430278 AGLP35573 1532 aa33.65■■■□□ 2.98
LMBR1-205ENST00000430278 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
LMBR1-205ENST00000430278 KIDINS220Q9ULH0 1771 aa33.62■■■□□ 2.97
LMBR1-205ENST00000430278 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
LMBR1-205ENST00000430278 C3P01024 1663 aa33.59■■■□□ 2.97
LMBR1-205ENST00000430278 ESF1Q9H501 851 aaKnown RBP33.59■■■□□ 2.97
LMBR1-205ENST00000430278 DMRT2Q9Y5R5 561 aa33.58■■■□□ 2.97
LMBR1-205ENST00000430278 ZNF777Q9ULD5 760 aaPredicted RBP33.56■■■□□ 2.96
LMBR1-205ENST00000430278 SAMD9LQ8IVG5 1584 aa33.54■■■□□ 2.96
LMBR1-205ENST00000430278 GPATCH8Q9UKJ3 1502 aaKnown RBP33.53■■■□□ 2.96
LMBR1-205ENST00000430278 CNTLNQ9NXG0 1405 aa33.49■■■□□ 2.95
LMBR1-205ENST00000430278 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
LMBR1-205ENST00000430278 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.952e-6■■■□□ 18.8
LMBR1-205ENST00000430278 SPAG9O60271 1321 aaKnown RBP33.47■■■□□ 2.95
LMBR1-205ENST00000430278 CFDP1Q9UEE9 299 aaPredicted RBP33.43■■■□□ 2.94
LMBR1-205ENST00000430278 KIAA1107Q9UPP5 1409 aa33.42■■■□□ 2.94
LMBR1-205ENST00000430278 PTPRTO14522 1441 aa33.41■■■□□ 2.94
LMBR1-205ENST00000430278 PLEKHH2Q8IVE3 1493 aa33.4■■■□□ 2.94
LMBR1-205ENST00000430278 CCNB3Q8WWL7 1395 aa33.39■■■□□ 2.94
LMBR1-205ENST00000430278 SUPT6HQ7KZ85 1726 aaKnown RBP33.39■■■□□ 2.94
LMBR1-205ENST00000430278 ATP7AQ04656 1500 aa33.38■■■□□ 2.93
LMBR1-205ENST00000430278 MROH2AA6NES4 1674 aa33.38■■■□□ 2.93
LMBR1-205ENST00000430278 ZMYM3Q14202 1370 aa33.35■■■□□ 2.93
LMBR1-205ENST00000430278 MTUS2Q5JR59 1369 aa33.35■■■□□ 2.93
LMBR1-205ENST00000430278 NPATQ14207 1427 aa33.35■■■□□ 2.93
LMBR1-205ENST00000430278 INO80Q9ULG1 1556 aaPredicted RBP33.34■■■□□ 2.93
LMBR1-205ENST00000430278 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
LMBR1-205ENST00000430278 A2MP01023 1474 aa33.31■■■□□ 2.92
LMBR1-205ENST00000430278 NCOA1Q15788 1441 aa33.31■■■□□ 2.92
LMBR1-205ENST00000430278 CLTCQ00610 1675 aaKnown RBP33.27■■■□□ 2.92
LMBR1-205ENST00000430278 ZNF644Q9H582 1327 aaPredicted RBP33.25■■■□□ 2.91
LMBR1-205ENST00000430278 CAMSAP1Q5T5Y3 1602 aa33.24■■■□□ 2.91
LMBR1-205ENST00000430278 TIAM1Q13009 1591 aa33.24■■■□□ 2.91
LMBR1-205ENST00000430278 LTBP4Q8N2S1 1624 aa33.24■■■□□ 2.91
LMBR1-205ENST00000430278 GGT6Q6P531 493 aa33.23■■■□□ 2.91
LMBR1-205ENST00000430278 ADGBQ8N7X0 1667 aa33.21■■■□□ 2.91
LMBR1-205ENST00000430278 EHBP1L1Q8N3D4 1523 aa33.21■■■□□ 2.91
LMBR1-205ENST00000430278 MBD5Q9P267 1494 aa33.19■■■□□ 2.9
LMBR1-205ENST00000430278 PPP6R1Q9UPN7 881 aa33.18■■■□□ 2.9
LMBR1-205ENST00000430278 PTPRKQ15262 1439 aa33.18■■■□□ 2.9
LMBR1-205ENST00000430278 CEP162Q5TB80 1403 aa33.16■■■□□ 2.9
LMBR1-205ENST00000430278 MYO3AQ8NEV4 1616 aa33.15■■■□□ 2.9
LMBR1-205ENST00000430278 NCKAP5LQ9HCH0 1330 aa33.15■■■□□ 2.9
LMBR1-205ENST00000430278 ZNF142P52746 1687 aaPredicted RBP33.14■■■□□ 2.9
LMBR1-205ENST00000430278 RTEL1-TNFRSF6BF6WH68 1400 aa33.14■■■□□ 2.9
LMBR1-205ENST00000430278 IQSEC2Q5JU85 1478 aa33.13■■■□□ 2.89
LMBR1-205ENST00000430278 CEP170BQ9Y4F5 1589 aaPredicted RBP33.1■■■□□ 2.89
LMBR1-205ENST00000430278 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
LMBR1-205ENST00000430278 DHX29Q7Z478 1369 aaKnown RBP33.09■■■□□ 2.89
LMBR1-205ENST00000430278 PKD2Q13563 968 aa33.08■■■□□ 2.89
LMBR1-205ENST00000430278 DISP3Q9P2K9 1392 aa33.06■■■□□ 2.88
LMBR1-205ENST00000430278 TCOF1Q13428 1488 aaKnown RBP33.04■■■□□ 2.88
LMBR1-205ENST00000430278 ZNF335Q9H4Z2 1342 aaPredicted RBP33.03■■■□□ 2.88
LMBR1-205ENST00000430278 NCOA2Q15596 1464 aa33.03■■■□□ 2.88
LMBR1-205ENST00000430278 CCDC141Q6ZP82 1450 aa33.01■■■□□ 2.88
LMBR1-205ENST00000430278 RSPH4AQ5TD94 716 aa33■■■□□ 2.87
LMBR1-205ENST00000430278 CAMSAP2Q08AD1 1489 aa32.99■■■□□ 2.87
LMBR1-205ENST00000430278 KIF3BO15066 747 aa32.99■■■□□ 2.87
LMBR1-205ENST00000430278 A2ML1A8K2U0 1454 aa32.98■■■□□ 2.87
LMBR1-205ENST00000430278 DNMT1P26358 1616 aaKnown RBP32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms