RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 DAPK1P53355 1430 aa32.83■■■□□ 2.85
VSX1-205ENST00000429762 CDC42BPBQ9Y5S2 1711 aa32.81■■■□□ 2.84
VSX1-205ENST00000429762 ABCC5O15440 1437 aa32.81■■■□□ 2.84
VSX1-205ENST00000429762 PREX2Q70Z35 1606 aa32.81■■■□□ 2.84
VSX1-205ENST00000429762 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
VSX1-205ENST00000429762 HFM1A2PYH4 1435 aa32.79■■■□□ 2.84
VSX1-205ENST00000429762 NAIPQ13075 1403 aa32.76■■■□□ 2.84
VSX1-205ENST00000429762 MYO5CQ9NQX4 1742 aa32.74■■■□□ 2.83
VSX1-205ENST00000429762 WDR7Q9Y4E6 1490 aa32.73■■■□□ 2.83
VSX1-205ENST00000429762 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
VSX1-205ENST00000429762 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
VSX1-205ENST00000429762 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
VSX1-205ENST00000429762 SAMD9LQ8IVG5 1584 aa32.71■■■□□ 2.83
VSX1-205ENST00000429762 ARHGAP5Q13017 1502 aa32.71■■■□□ 2.83
VSX1-205ENST00000429762 GCC2Q8IWJ2 1684 aa32.7■■■□□ 2.82
VSX1-205ENST00000429762 ASXL2Q76L83 1435 aa32.69■■■□□ 2.82
VSX1-205ENST00000429762 CROCC2H7BZ55 1655 aa32.69■■■□□ 2.82
VSX1-205ENST00000429762 KDM6BO15054 1643 aa32.66■■■□□ 2.82
VSX1-205ENST00000429762 NPM1P06748 294 aaKnown RBP eCLIP32.65■■■□□ 2.82
VSX1-205ENST00000429762 AKNAQ7Z591 1439 aa32.65■■■□□ 2.82
VSX1-205ENST00000429762 HNRNPMP52272 730 aaKnown RBP eCLIP32.64■■■□□ 2.82
VSX1-205ENST00000429762 CYB5RLQ6IPT4 315 aa32.63■■■□□ 2.81
VSX1-205ENST00000429762 ADGBQ8N7X0 1667 aa32.6■■■□□ 2.81
VSX1-205ENST00000429762 ROCK1Q13464 1354 aa32.59■■■□□ 2.81
VSX1-205ENST00000429762 PLCH2O75038 1416 aa32.59■■■□□ 2.81
VSX1-205ENST00000429762 MAPKBP1O60336 1514 aa32.58■■■□□ 2.81
VSX1-205ENST00000429762 SYCP2Q9BX26 1530 aa32.58■■■□□ 2.81
VSX1-205ENST00000429762 MBD5Q9P267 1494 aa32.57■■■□□ 2.8
VSX1-205ENST00000429762 ARHGEF5Q12774 1597 aa32.55■■■□□ 2.8
VSX1-205ENST00000429762 ABCA9Q8IUA7 1624 aa32.53■■■□□ 2.8
VSX1-205ENST00000429762 CLSPNQ9HAW4 1339 aa32.52■■■□□ 2.8
VSX1-205ENST00000429762 C9orf84Q5VXU9 1444 aa32.52■■■□□ 2.8
VSX1-205ENST00000429762 NCOA1Q15788 1441 aa32.5■■■□□ 2.79
VSX1-205ENST00000429762 ADGRL2O95490 1459 aa32.5■■■□□ 2.79
VSX1-205ENST00000429762 CCDC141Q6ZP82 1450 aa32.49■■■□□ 2.79
VSX1-205ENST00000429762 SHANK2Q9UPX8 1470 aa32.49■■■□□ 2.79
VSX1-205ENST00000429762 EFCAB2Q5VUJ9 269 aa32.48■■■□□ 2.79
VSX1-205ENST00000429762 ARHGEF12Q9NZN5 1544 aa32.48■■■□□ 2.79
VSX1-205ENST00000429762 ANKRD30AQ9BXX3 1397 aa32.46■■■□□ 2.79
VSX1-205ENST00000429762 TSPY4P0CV99 314 aa32.45■■■□□ 2.79
VSX1-205ENST00000429762 TSPY10P0CW01 314 aa32.45■■■□□ 2.79
VSX1-205ENST00000429762 TRIM52Q96A61 297 aa32.44■■■□□ 2.78
VSX1-205ENST00000429762 ABCC1P33527 1531 aa32.43■■■□□ 2.78
VSX1-205ENST00000429762 PLEKHH2Q8IVE3 1493 aa32.43■■■□□ 2.78
VSX1-205ENST00000429762 ARAP3Q8WWN8 1544 aa32.41■■■□□ 2.78
VSX1-205ENST00000429762 KIAA1107Q9UPP5 1409 aa32.41■■■□□ 2.78
VSX1-205ENST00000429762 FANCAO15360 1455 aa32.38■■■□□ 2.77
VSX1-205ENST00000429762 RSPH4AQ5TD94 716 aa32.35■■■□□ 2.77
VSX1-205ENST00000429762 TRAPPC8Q9Y2L5 1435 aa32.35■■■□□ 2.77
VSX1-205ENST00000429762 SIN3AQ96ST3 1273 aa32.34■■■□□ 2.77
VSX1-205ENST00000429762 KIF15Q9NS87 1388 aa32.33■■■□□ 2.77
VSX1-205ENST00000429762 MAST1Q9Y2H9 1570 aa32.32■■■□□ 2.76
VSX1-205ENST00000429762 ANKRD50Q9ULJ7 1429 aa32.31■■■□□ 2.76
VSX1-205ENST00000429762 DENND4BO75064 1496 aaPredicted RBP32.3■■■□□ 2.76
VSX1-205ENST00000429762 NEUROD1Q13562 356 aa32.29■■■□□ 2.76
VSX1-205ENST00000429762 CD109Q6YHK3 1445 aa32.29■■■□□ 2.76
VSX1-205ENST00000429762 MPHOSPH9Q99550 1183 aa32.25■■■□□ 2.75
VSX1-205ENST00000429762 ADGRL1O94910 1474 aa32.25■■■□□ 2.75
VSX1-205ENST00000429762 AFAP1Q8N556 730 aa32.24■■■□□ 2.75
VSX1-205ENST00000429762 SCAPERQ9BY12 1400 aa32.21■■■□□ 2.75
VSX1-205ENST00000429762 PLXNC1O60486 1568 aa32.21■■■□□ 2.75
VSX1-205ENST00000429762 FOXD1Q16676 465 aa32.21■■■□□ 2.75
VSX1-205ENST00000429762 PZPP20742 1482 aa32.18■■■□□ 2.74
VSX1-205ENST00000429762 SPAG9O60271 1321 aaKnown RBP32.16■■■□□ 2.74
VSX1-205ENST00000429762 SLC4A1APQ9BWU0 796 aaKnown RBP32.15■■■□□ 2.74
VSX1-205ENST00000429762 ZFYVE16Q7Z3T8 1539 aa32.14■■■□□ 2.74
VSX1-205ENST00000429762 CFAP74Q9C0B2 1584 aa32.13■■■□□ 2.73
VSX1-205ENST00000429762 MAP3K4Q9Y6R4 1608 aa32.13■■■□□ 2.73
VSX1-205ENST00000429762 ACIN1Q9UKV3 1341 aaKnown RBP32.1■■■□□ 2.73
VSX1-205ENST00000429762 DIP2BQ9P265 1576 aa32.1■■■□□ 2.73
VSX1-205ENST00000429762 GLI2P10070 1586 aa32.09■■■□□ 2.73
VSX1-205ENST00000429762 DUOX2Q9NRD8 1548 aa32.09■■■□□ 2.73
VSX1-205ENST00000429762 NUP155O75694 1391 aa32.09■■■□□ 2.73
VSX1-205ENST00000429762 INO80Q9ULG1 1556 aaPredicted RBP32.08■■■□□ 2.73
VSX1-205ENST00000429762 FAM69CQ0P6D2 419 aa32.08■■■□□ 2.73
VSX1-205ENST00000429762 ATP7AQ04656 1500 aa32.07■■■□□ 2.72
VSX1-205ENST00000429762 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
VSX1-205ENST00000429762 RTEL1-TNFRSF6BF6WH68 1400 aa32.05■■■□□ 2.72
VSX1-205ENST00000429762 KDM5DQ9BY66 1539 aa32.02■■■□□ 2.72
VSX1-205ENST00000429762 ZNF518AQ6AHZ1 1483 aa32■■■□□ 2.71
VSX1-205ENST00000429762 NEO1Q92859 1461 aa32■■■□□ 2.71
VSX1-205ENST00000429762 PKD2Q13563 968 aa31.99■■■□□ 2.71
VSX1-205ENST00000429762 POGZQ7Z3K3 1410 aa31.99■■■□□ 2.71
VSX1-205ENST00000429762 ERBINQ96RT1 1412 aa31.99■■■□□ 2.71
VSX1-205ENST00000429762 UNC13BO14795 1591 aa31.99■■■□□ 2.71
VSX1-205ENST00000429762 TSPOAP1O95153 1857 aa31.99■■■□□ 2.71
VSX1-205ENST00000429762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.99■■■□□ 2.71
VSX1-205ENST00000429762 ANKRD30BQ9BXX2 1392 aa31.98■■■□□ 2.71
VSX1-205ENST00000429762 TONSLQ96HA7 1378 aa31.98■■■□□ 2.71
VSX1-205ENST00000429762 KIDINS220Q9ULH0 1771 aa31.97■■■□□ 2.71
VSX1-205ENST00000429762 FAM135AQ9P2D6 1515 aa31.94■■■□□ 2.7
VSX1-205ENST00000429762 KDM5CP41229 1560 aa31.93■■■□□ 2.7
VSX1-205ENST00000429762 RAPGEF3O95398 923 aa31.92■■■□□ 2.7
VSX1-205ENST00000429762 PPRC1Q5VV67 1664 aaKnown RBP31.91■■■□□ 2.7
VSX1-205ENST00000429762 TIMELESSQ9UNS1 1208 aa31.9■■■□□ 2.7
VSX1-205ENST00000429762 KIF13AQ9H1H9 1805 aa31.89■■■□□ 2.7
VSX1-205ENST00000429762 ZNF316A6NFI3 1004 aaPredicted RBP31.88■■■□□ 2.69
VSX1-205ENST00000429762 HECW2Q9P2P5 1572 aa31.87■■■□□ 2.69
VSX1-205ENST00000429762 IQGAP3Q86VI3 1631 aa31.86■■■□□ 2.69
VSX1-205ENST00000429762 MAGI2Q86UL8 1455 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms