RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 CEBPAP49715 358 aaPredicted RBP19.83■□□□□ 0.77
DDX39B-209ENST00000428450 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.76
DDX39B-209ENST00000428450 ARHGEF12Q9NZN5 1544 aa19.82■□□□□ 0.76
DDX39B-209ENST00000428450 PREX1Q8TCU6 1659 aa19.81■□□□□ 0.76
DDX39B-209ENST00000428450 HECW1Q76N89 1606 aa19.81■□□□□ 0.76
DDX39B-209ENST00000428450 CFAP74Q9C0B2 1584 aa19.81■□□□□ 0.76
DDX39B-209ENST00000428450 ATP10AO60312 1499 aa19.77■□□□□ 0.76
DDX39B-209ENST00000428450 SCAPERQ9BY12 1400 aa19.76■□□□□ 0.75
DDX39B-209ENST00000428450 PTPRTO14522 1441 aa19.75■□□□□ 0.75
DDX39B-209ENST00000428450 C9orf84Q5VXU9 1444 aa19.73■□□□□ 0.75
DDX39B-209ENST00000428450 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
DDX39B-209ENST00000428450 SETD1BQ9UPS6 1966 aaKnown RBP19.72■□□□□ 0.75
DDX39B-209ENST00000428450 LTBP4Q8N2S1 1624 aa19.72■□□□□ 0.75
DDX39B-209ENST00000428450 PLCH2O75038 1416 aa19.71■□□□□ 0.75
DDX39B-209ENST00000428450 IQSEC2Q5JU85 1478 aa19.67■□□□□ 0.74
DDX39B-209ENST00000428450 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
DDX39B-209ENST00000428450 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
DDX39B-209ENST00000428450 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
DDX39B-209ENST00000428450 CDK13Q14004 1512 aaKnown RBP19.61■□□□□ 0.73
DDX39B-209ENST00000428450 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
DDX39B-209ENST00000428450 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
DDX39B-209ENST00000428450 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
DDX39B-209ENST00000428450 TRAPPC8Q9Y2L5 1435 aa19.58■□□□□ 0.72
DDX39B-209ENST00000428450 C3P01024 1663 aa19.57■□□□□ 0.72
DDX39B-209ENST00000428450 KDM5CP41229 1560 aa19.57■□□□□ 0.72
DDX39B-209ENST00000428450 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
DDX39B-209ENST00000428450 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
DDX39B-209ENST00000428450 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
DDX39B-209ENST00000428450 MYO5CQ9NQX4 1742 aa19.51■□□□□ 0.71
DDX39B-209ENST00000428450 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
DDX39B-209ENST00000428450 AGLP35573 1532 aa19.5■□□□□ 0.71
DDX39B-209ENST00000428450 MLH3Q9UHC1 1453 aa19.49■□□□□ 0.71
DDX39B-209ENST00000428450 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
DDX39B-209ENST00000428450 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
DDX39B-209ENST00000428450 CAMSAP1Q5T5Y3 1602 aa19.47■□□□□ 0.71
DDX39B-209ENST00000428450 ABCA6Q8N139 1617 aa19.47■□□□□ 0.71
DDX39B-209ENST00000428450 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
DDX39B-209ENST00000428450 KIF14Q15058 1648 aa19.46■□□□□ 0.71
DDX39B-209ENST00000428450 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
DDX39B-209ENST00000428450 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
DDX39B-209ENST00000428450 NPATQ14207 1427 aa19.43■□□□□ 0.7
DDX39B-209ENST00000428450 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
DDX39B-209ENST00000428450 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
DDX39B-209ENST00000428450 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
DDX39B-209ENST00000428450 ZMYM3Q14202 1370 aa19.4■□□□□ 0.7
DDX39B-209ENST00000428450 PKD2Q13563 968 aa19.39■□□□□ 0.69
DDX39B-209ENST00000428450 HSPA1LP34931 641 aa19.38■□□□□ 0.69
DDX39B-209ENST00000428450 EEA1Q15075 1411 aa19.38■□□□□ 0.69
DDX39B-209ENST00000428450 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
DDX39B-209ENST00000428450 CDC42BPBQ9Y5S2 1711 aa19.37■□□□□ 0.69
DDX39B-209ENST00000428450 PLA2R1Q13018 1463 aa19.36■□□□□ 0.69
DDX39B-209ENST00000428450 TCOF1Q13428 1488 aaKnown RBP19.36■□□□□ 0.69
DDX39B-209ENST00000428450 FMN1Q68DA7 1419 aa19.36■□□□□ 0.69
DDX39B-209ENST00000428450 KIDINS220Q9ULH0 1771 aa19.36■□□□□ 0.69
DDX39B-209ENST00000428450 ABCC1P33527 1531 aa19.35■□□□□ 0.69
DDX39B-209ENST00000428450 MROH2AA6NES4 1674 aa19.34■□□□□ 0.69
DDX39B-209ENST00000428450 CLIP1P30622 1438 aa19.33■□□□□ 0.68
DDX39B-209ENST00000428450 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
DDX39B-209ENST00000428450 ITSN2Q9NZM3 1697 aa19.3■□□□□ 0.68
DDX39B-209ENST00000428450 PIP4K2BP78356 416 aa19.3■□□□□ 0.68
DDX39B-209ENST00000428450 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
DDX39B-209ENST00000428450 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
DDX39B-209ENST00000428450 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
DDX39B-209ENST00000428450 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
DDX39B-209ENST00000428450 CEP170BQ9Y4F5 1589 aaPredicted RBP19.28■□□□□ 0.68
DDX39B-209ENST00000428450 TOM1O60784 492 aa19.28■□□□□ 0.68
DDX39B-209ENST00000428450 PREX2Q70Z35 1606 aa19.28■□□□□ 0.68
DDX39B-209ENST00000428450 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
DDX39B-209ENST00000428450 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
DDX39B-209ENST00000428450 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
DDX39B-209ENST00000428450 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
DDX39B-209ENST00000428450 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
DDX39B-209ENST00000428450 SUPT6HQ7KZ85 1726 aaKnown RBP19.22■□□□□ 0.67
DDX39B-209ENST00000428450 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
DDX39B-209ENST00000428450 CPS1P31327 1500 aa19.2■□□□□ 0.66
DDX39B-209ENST00000428450 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
DDX39B-209ENST00000428450 GGT6Q6P531 493 aa19.19■□□□□ 0.66
DDX39B-209ENST00000428450 A2ML1A8K2U0 1454 aa19.19■□□□□ 0.66
DDX39B-209ENST00000428450 SHANK2Q9UPX8 1470 aa19.19■□□□□ 0.66
DDX39B-209ENST00000428450 PLXNC1O60486 1568 aa19.19■□□□□ 0.66
DDX39B-209ENST00000428450 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
DDX39B-209ENST00000428450 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
DDX39B-209ENST00000428450 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
DDX39B-209ENST00000428450 ALKQ9UM73 1620 aa19.18■□□□□ 0.66
DDX39B-209ENST00000428450 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
DDX39B-209ENST00000428450 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
DDX39B-209ENST00000428450 A2MP01023 1474 aa19.16■□□□□ 0.66
DDX39B-209ENST00000428450 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
DDX39B-209ENST00000428450 NEURL4Q96JN8 1562 aa19.15■□□□□ 0.66
DDX39B-209ENST00000428450 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
DDX39B-209ENST00000428450 GPATCH8Q9UKJ3 1502 aaKnown RBP19.12■□□□□ 0.65
DDX39B-209ENST00000428450 VWDEQ8N2E2 1590 aa19.11■□□□□ 0.65
DDX39B-209ENST00000428450 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
DDX39B-209ENST00000428450 KIAA1107Q9UPP5 1409 aa19.11■□□□□ 0.65
DDX39B-209ENST00000428450 RGS17Q9UGC6 210 aaPredicted RBP19.11■□□□□ 0.65
DDX39B-209ENST00000428450 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
DDX39B-209ENST00000428450 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
DDX39B-209ENST00000428450 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
DDX39B-209ENST00000428450 FBXO31Q5XUX0 539 aaPredicted RBP19.09■□□□□ 0.65
DDX39B-209ENST00000428450 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms