RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 CHIC2Q9UKJ5 165 aa11.01□□□□□ -0.65
LRCH3-204ENST00000428136 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
LRCH3-204ENST00000428136 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
LRCH3-204ENST00000428136 FKBP8Q14318 412 aa11.01□□□□□ -0.65
LRCH3-204ENST00000428136 EIF4G3O43432 1585 aaKnown RBP11□□□□□ -0.65
LRCH3-204ENST00000428136 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
LRCH3-204ENST00000428136 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
LRCH3-204ENST00000428136 SPATA31E1Q6ZUB1 1445 aa10.99□□□□□ -0.65
LRCH3-204ENST00000428136 ADGBQ8N7X0 1667 aa10.99□□□□□ -0.65
LRCH3-204ENST00000428136 ITSN2Q9NZM3 1697 aa10.99□□□□□ -0.65
LRCH3-204ENST00000428136 ADGRL2O95490 1459 aa10.99□□□□□ -0.65
LRCH3-204ENST00000428136 L3MBTL2Q969R5 705 aa10.99□□□□□ -0.65
LRCH3-204ENST00000428136 TRIM52Q96A61 297 aa10.99□□□□□ -0.65
LRCH3-204ENST00000428136 MAGI1Q96QZ7 1491 aaPredicted RBP10.98□□□□□ -0.65
LRCH3-204ENST00000428136 TROQ12816 1431 aaPredicted RBP10.98□□□□□ -0.65
LRCH3-204ENST00000428136 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
LRCH3-204ENST00000428136 PZPP20742 1482 aa10.97□□□□□ -0.65
LRCH3-204ENST00000428136 CCDC7Q96M83 1385 aa10.96□□□□□ -0.65
LRCH3-204ENST00000428136 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.65
LRCH3-204ENST00000428136 MBD5Q9P267 1494 aa10.96□□□□□ -0.65
LRCH3-204ENST00000428136 NEFLP07196 543 aa10.96□□□□□ -0.66
LRCH3-204ENST00000428136 CEP170Q5SW79 1584 aa10.96□□□□□ -0.66
LRCH3-204ENST00000428136 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.66
LRCH3-204ENST00000428136 GPATCH8Q9UKJ3 1502 aaKnown RBP10.95□□□□□ -0.66
LRCH3-204ENST00000428136 SYNJ2O15056 1496 aa10.94□□□□□ -0.66
LRCH3-204ENST00000428136 ZNF644Q9H582 1327 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-204ENST00000428136 NBPF8Q3BBV2 869 aa10.94□□□□□ -0.66
LRCH3-204ENST00000428136 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
LRCH3-204ENST00000428136 NUP160Q12769 1436 aa10.93□□□□□ -0.66
LRCH3-204ENST00000428136 PRG4Q92954 1404 aaPredicted RBP10.93□□□□□ -0.66
LRCH3-204ENST00000428136 ERICH6BQ5W0A0 696 aa10.92□□□□□ -0.66
LRCH3-204ENST00000428136 KIF14Q15058 1648 aa10.92□□□□□ -0.66
LRCH3-204ENST00000428136 KIAA1107Q9UPP5 1409 aa10.91□□□□□ -0.66
LRCH3-204ENST00000428136 FOXD1Q16676 465 aa10.91□□□□□ -0.66
LRCH3-204ENST00000428136 BCANQ96GW7 911 aa10.91□□□□□ -0.66
LRCH3-204ENST00000428136 PRKRIP1Q9H875 184 aaPredicted RBP10.91□□□□□ -0.66
LRCH3-204ENST00000428136 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
LRCH3-204ENST00000428136 PLB1Q6P1J6 1458 aa10.91□□□□□ -0.66
LRCH3-204ENST00000428136 ABCA8O94911 1581 aa10.9□□□□□ -0.66
LRCH3-204ENST00000428136 SLC4A1APQ9BWU0 796 aaKnown RBP10.9□□□□□ -0.67
LRCH3-204ENST00000428136 KDM5DQ9BY66 1539 aa10.89□□□□□ -0.67
LRCH3-204ENST00000428136 HNRNPUQ00839 825 aaKnown RBP eCLIP10.89□□□□□ -0.67
LRCH3-204ENST00000428136 ABCC10Q5T3U5 1492 aa10.89□□□□□ -0.67
LRCH3-204ENST00000428136 UHRF1BP1Q6BDS2 1440 aa10.88□□□□□ -0.67
LRCH3-204ENST00000428136 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
LRCH3-204ENST00000428136 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
LRCH3-204ENST00000428136 KIF7Q2M1P5 1343 aa10.88□□□□□ -0.67
LRCH3-204ENST00000428136 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
LRCH3-204ENST00000428136 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
LRCH3-204ENST00000428136 ARID4BQ4LE39 1312 aaPredicted RBP10.88□□□□□ -0.67
LRCH3-204ENST00000428136 ANKRD30AQ9BXX3 1397 aa10.87□□□□□ -0.67
LRCH3-204ENST00000428136 KDM5CP41229 1560 aa10.87□□□□□ -0.67
LRCH3-204ENST00000428136 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
LRCH3-204ENST00000428136 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
LRCH3-204ENST00000428136 ANP32EQ9BTT0 268 aa10.86□□□□□ -0.67
LRCH3-204ENST00000428136 DHX29Q7Z478 1369 aaKnown RBP10.85□□□□□ -0.67
LRCH3-204ENST00000428136 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
LRCH3-204ENST00000428136 BCORL1Q5H9F3 1711 aa10.85□□□□□ -0.67
LRCH3-204ENST00000428136 RBM19Q9Y4C8 960 aaKnown RBP10.85□□□□□ -0.67
LRCH3-204ENST00000428136 ARHGEF5Q12774 1597 aa10.85□□□□□ -0.67
LRCH3-204ENST00000428136 PTPRGP23470 1445 aa10.85□□□□□ -0.67
LRCH3-204ENST00000428136 ANKRD50Q9ULJ7 1429 aa10.85□□□□□ -0.67
LRCH3-204ENST00000428136 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
LRCH3-204ENST00000428136 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
LRCH3-204ENST00000428136 ATP10BO94823 1461 aa10.84□□□□□ -0.67
LRCH3-204ENST00000428136 RALGAPBQ86X10 1494 aa10.84□□□□□ -0.67
LRCH3-204ENST00000428136 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
LRCH3-204ENST00000428136 USP47Q96K76 1375 aa10.81□□□□□ -0.68
LRCH3-204ENST00000428136 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
LRCH3-204ENST00000428136 PKD2Q13563 968 aa10.8□□□□□ -0.68
LRCH3-204ENST00000428136 MRS2Q9HD23 443 aa10.8□□□□□ -0.68
LRCH3-204ENST00000428136 ROCK2O75116 1388 aaKnown RBP10.8□□□□□ -0.68
LRCH3-204ENST00000428136 PLEKHD1A6NEE1 506 aa10.79□□□□□ -0.68
LRCH3-204ENST00000428136 PPP4R2Q9NY27 417 aa10.79□□□□□ -0.68
LRCH3-204ENST00000428136 SMG6Q86US8 1419 aaKnown RBP10.78□□□□□ -0.68
LRCH3-204ENST00000428136 PREX2Q70Z35 1606 aa10.77□□□□□ -0.68
LRCH3-204ENST00000428136 FANCIQ9NVI1 1328 aa10.77□□□□□ -0.69
LRCH3-204ENST00000428136 MAST1Q9Y2H9 1570 aa10.77□□□□□ -0.69
LRCH3-204ENST00000428136 E9PCH4 1651 aa10.77□□□□□ -0.69
LRCH3-204ENST00000428136 NUP155O75694 1391 aa10.77□□□□□ -0.69
LRCH3-204ENST00000428136 FAM9BQ8IZU0 186 aa10.77□□□□□ -0.69
LRCH3-204ENST00000428136 RNF123Q5XPI4 1314 aa10.76□□□□□ -0.69
LRCH3-204ENST00000428136 CDC42BPBQ9Y5S2 1711 aa10.76□□□□□ -0.69
LRCH3-204ENST00000428136 SAMD9LQ8IVG5 1584 aa10.76□□□□□ -0.69
LRCH3-204ENST00000428136 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-204ENST00000428136 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
LRCH3-204ENST00000428136 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
LRCH3-204ENST00000428136 KIF15Q9NS87 1388 aa10.74□□□□□ -0.69
LRCH3-204ENST00000428136 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
LRCH3-204ENST00000428136 UNC13BO14795 1591 aa10.74□□□□□ -0.69
LRCH3-204ENST00000428136 FAM135AQ9P2D6 1515 aa10.73□□□□□ -0.69
LRCH3-204ENST00000428136 TSPY4P0CV99 314 aa10.73□□□□□ -0.69
LRCH3-204ENST00000428136 TSPY10P0CW01 314 aa10.73□□□□□ -0.69
LRCH3-204ENST00000428136 LAMC1P11047 1609 aa10.73□□□□□ -0.69
LRCH3-204ENST00000428136 SHROOM2Q13796 1616 aa10.72□□□□□ -0.69
LRCH3-204ENST00000428136 LRPPRCP42704 1394 aaKnown RBP10.72□□□□□ -0.69
LRCH3-204ENST00000428136 IRX6P78412 446 aaPredicted RBP10.72□□□□□ -0.69
LRCH3-204ENST00000428136 TRPM1Q7Z4N2 1603 aa10.72□□□□□ -0.69
LRCH3-204ENST00000428136 PNISRQ8TF01 805 aaKnown RBP10.72□□□□□ -0.69
LRCH3-204ENST00000428136 FBLN2P98095 1184 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms