RNA–Protein interactions for RNA: ENST00000426951.5

RBM39-211, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best)

Gene RBM39, Length 840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-211ENST00000426951 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
RBM39-211ENST00000426951 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
RBM39-211ENST00000426951 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
RBM39-211ENST00000426951 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
RBM39-211ENST00000426951 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
RBM39-211ENST00000426951 PLCG2P16885 1265 aa10.36□□□□□ -0.75
RBM39-211ENST00000426951 ST18O60284 1047 aa10.3□□□□□ -0.76
RBM39-211ENST00000426951 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
RBM39-211ENST00000426951 G3V3G9 751 aa10.29□□□□□ -0.76
RBM39-211ENST00000426951 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
RBM39-211ENST00000426951 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
RBM39-211ENST00000426951 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
RBM39-211ENST00000426951 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
RBM39-211ENST00000426951 PDE4AP27815 886 aa10.25□□□□□ -0.77
RBM39-211ENST00000426951 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
RBM39-211ENST00000426951 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
RBM39-211ENST00000426951 TMEM121BQ9BXQ6 578 aaPredicted RBP10.24□□□□□ -0.77
RBM39-211ENST00000426951 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
RBM39-211ENST00000426951 BCANQ96GW7 911 aa10.21□□□□□ -0.77
RBM39-211ENST00000426951 DDX27Q96GQ7 796 aaKnown RBP10.2□□□□□ -0.78
RBM39-211ENST00000426951 GPHNQ9NQX3 736 aaPredicted RBP10.19□□□□□ -0.78
RBM39-211ENST00000426951 MFSD10Q14728 455 aa10.18□□□□□ -0.78
RBM39-211ENST00000426951 TMC2Q8TDI7 906 aa10.18□□□□□ -0.78
RBM39-211ENST00000426951 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
RBM39-211ENST00000426951 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
RBM39-211ENST00000426951 E2F4Q16254 413 aa10.16□□□□□ -0.78
RBM39-211ENST00000426951 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
RBM39-211ENST00000426951 TMEM92Q6UXU6 159 aa10.15□□□□□ -0.78
RBM39-211ENST00000426951 DSG2Q14126 1118 aa10.14□□□□□ -0.79
RBM39-211ENST00000426951 PPP1R15BQ5SWA1 713 aa10.14□□□□□ -0.79
RBM39-211ENST00000426951 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
RBM39-211ENST00000426951 NBR1Q14596 966 aa10.13□□□□□ -0.79
RBM39-211ENST00000426951 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.13□□□□□ -0.79
RBM39-211ENST00000426951 KIF3CO14782 793 aa10.12□□□□□ -0.79
RBM39-211ENST00000426951 FOXK1P85037 733 aa10.11□□□□□ -0.79
RBM39-211ENST00000426951 PLPP6Q8IY26 295 aa10.09□□□□□ -0.79
RBM39-211ENST00000426951 SNPHO15079 494 aa10.08□□□□□ -0.8
RBM39-211ENST00000426951 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
RBM39-211ENST00000426951 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
RBM39-211ENST00000426951 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
RBM39-211ENST00000426951 DPYSL4O14531 572 aa10□□□□□ -0.81
RBM39-211ENST00000426951 UPF1Q92900 1129 aaKnown RBP eCLIP9.99□□□□□ -0.81
RBM39-211ENST00000426951 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
RBM39-211ENST00000426951 SEMA3EO15041 775 aa9.97□□□□□ -0.81
RBM39-211ENST00000426951 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
RBM39-211ENST00000426951 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
RBM39-211ENST00000426951 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
RBM39-211ENST00000426951 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
RBM39-211ENST00000426951 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
RBM39-211ENST00000426951 EMP3P54852 163 aa9.91□□□□□ -0.82
RBM39-211ENST00000426951 PDIA6Q15084 440 aa9.91□□□□□ -0.82
RBM39-211ENST00000426951 TESPA1A2RU30 521 aaPredicted RBP9.9□□□□□ -0.82
RBM39-211ENST00000426951 PTCD2Q8WV60 388 aaKnown RBP9.9□□□□□ -0.82
RBM39-211ENST00000426951 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
RBM39-211ENST00000426951 SLC34A2O95436 690 aa9.89□□□□□ -0.83
RBM39-211ENST00000426951 TBC1D12O60347 775 aa9.88□□□□□ -0.83
RBM39-211ENST00000426951 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
RBM39-211ENST00000426951 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
RBM39-211ENST00000426951 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
RBM39-211ENST00000426951 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
RBM39-211ENST00000426951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
RBM39-211ENST00000426951 EVI5O60447 810 aa9.85□□□□□ -0.83
RBM39-211ENST00000426951 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
RBM39-211ENST00000426951 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
RBM39-211ENST00000426951 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
RBM39-211ENST00000426951 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
RBM39-211ENST00000426951 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
RBM39-211ENST00000426951 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
RBM39-211ENST00000426951 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
RBM39-211ENST00000426951 HS3ST6Q96QI5 342 aa9.83□□□□□ -0.84
RBM39-211ENST00000426951 RNF166Q96A37 237 aaPredicted RBP9.82□□□□□ -0.84
RBM39-211ENST00000426951 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
RBM39-211ENST00000426951 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
RBM39-211ENST00000426951 DDX12PQ92771 950 aa9.81□□□□□ -0.84
RBM39-211ENST00000426951 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.843e-12■■■□□ 18.1
RBM39-211ENST00000426951 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
RBM39-211ENST00000426951 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
RBM39-211ENST00000426951 RBM26Q5T8P6 1007 aaKnown RBP9.79□□□□□ -0.84
RBM39-211ENST00000426951 NUDT7P0C024 238 aa9.78□□□□□ -0.84
RBM39-211ENST00000426951 PTGER2P43116 358 aa9.77□□□□□ -0.85
RBM39-211ENST00000426951 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
RBM39-211ENST00000426951 ANO8Q9HCE9 1232 aaPredicted RBP9.77□□□□□ -0.85
RBM39-211ENST00000426951 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
RBM39-211ENST00000426951 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
RBM39-211ENST00000426951 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
RBM39-211ENST00000426951 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
RBM39-211ENST00000426951 OSBPP22059 807 aa9.73□□□□□ -0.85
RBM39-211ENST00000426951 HOXB1P14653 301 aaPredicted RBP9.72□□□□□ -0.85
RBM39-211ENST00000426951 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.86
RBM39-211ENST00000426951 ERBB3P21860 1342 aa9.71□□□□□ -0.86
RBM39-211ENST00000426951 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
RBM39-211ENST00000426951 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
RBM39-211ENST00000426951 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
RBM39-211ENST00000426951 PHF14O94880 888 aa9.69□□□□□ -0.86
RBM39-211ENST00000426951 LHX6Q9UPM6 363 aa9.69□□□□□ -0.86
RBM39-211ENST00000426951 NUTM2FA1L443 756 aa9.68□□□□□ -0.86
RBM39-211ENST00000426951 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
RBM39-211ENST00000426951 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
RBM39-211ENST00000426951 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
RBM39-211ENST00000426951 EPAS1Q99814 870 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms