RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CSRNP3Q8WYN3 585 aa24.06■■□□□ 1.44
HDAC6-206ENST00000426196 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
HDAC6-206ENST00000426196 SOCS7O14512 581 aa24.05■■□□□ 1.44
HDAC6-206ENST00000426196 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
HDAC6-206ENST00000426196 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
HDAC6-206ENST00000426196 SCAPERQ9BY12 1400 aa24.02■■□□□ 1.44
HDAC6-206ENST00000426196 SETD1BQ9UPS6 1966 aaKnown RBP24.02■■□□□ 1.43
HDAC6-206ENST00000426196 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
HDAC6-206ENST00000426196 ATP10AO60312 1499 aa24.01■■□□□ 1.43
HDAC6-206ENST00000426196 STRCQ7RTU9 1775 aa24■■□□□ 1.43
HDAC6-206ENST00000426196 PLCH2O75038 1416 aa23.98■■□□□ 1.43
HDAC6-206ENST00000426196 SPATA31D1Q6ZQQ2 1576 aa23.96■■□□□ 1.43
HDAC6-206ENST00000426196 UHRF1BP1Q6BDS2 1440 aa23.96■■□□□ 1.43
HDAC6-206ENST00000426196 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
HDAC6-206ENST00000426196 CDK13Q14004 1512 aaKnown RBP23.95■■□□□ 1.43
HDAC6-206ENST00000426196 CEBPAP49715 358 aaPredicted RBP23.94■■□□□ 1.42
HDAC6-206ENST00000426196 EFCAB2Q5VUJ9 269 aa23.9■■□□□ 1.42
HDAC6-206ENST00000426196 EEA1Q15075 1411 aa23.9■■□□□ 1.42
HDAC6-206ENST00000426196 ZNF518AQ6AHZ1 1483 aa23.89■■□□□ 1.42
HDAC6-206ENST00000426196 PTPRTO14522 1441 aa23.86■■□□□ 1.41
HDAC6-206ENST00000426196 KDM5CP41229 1560 aa23.84■■□□□ 1.41
HDAC6-206ENST00000426196 C3P01024 1663 aa23.83■■□□□ 1.41
HDAC6-206ENST00000426196 MYT1LQ9UL68 1186 aa23.82■■□□□ 1.4
HDAC6-206ENST00000426196 KIF14Q15058 1648 aa23.81■■□□□ 1.4
HDAC6-206ENST00000426196 ARHGAP5Q13017 1502 aa23.81■■□□□ 1.4
HDAC6-206ENST00000426196 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
HDAC6-206ENST00000426196 DIP2CQ9Y2E4 1556 aa23.81■■□□□ 1.4
HDAC6-206ENST00000426196 CDK11AQ9UQ88 783 aaPredicted RBP23.8■■□□□ 1.4
HDAC6-206ENST00000426196 IQSEC2Q5JU85 1478 aa23.8■■□□□ 1.4
HDAC6-206ENST00000426196 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
HDAC6-206ENST00000426196 ESF1Q9H501 851 aaKnown RBP23.78■■□□□ 1.4
HDAC6-206ENST00000426196 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
HDAC6-206ENST00000426196 AFAP1Q8N556 730 aa23.77■■□□□ 1.4
HDAC6-206ENST00000426196 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
HDAC6-206ENST00000426196 ABCA6Q8N139 1617 aa23.76■■□□□ 1.39
HDAC6-206ENST00000426196 TRAPPC8Q9Y2L5 1435 aa23.74■■□□□ 1.39
HDAC6-206ENST00000426196 CLIP1P30622 1438 aa23.73■■□□□ 1.39
HDAC6-206ENST00000426196 TROQ12816 1431 aaPredicted RBP23.72■■□□□ 1.39
HDAC6-206ENST00000426196 NCOA1Q15788 1441 aa23.72■■□□□ 1.39
HDAC6-206ENST00000426196 MLH3Q9UHC1 1453 aa23.72■■□□□ 1.39
HDAC6-206ENST00000426196 AGLP35573 1532 aa23.72■■□□□ 1.39
HDAC6-206ENST00000426196 CNTLNQ9NXG0 1405 aa23.69■■□□□ 1.38
HDAC6-206ENST00000426196 CDC42BPBQ9Y5S2 1711 aa23.69■■□□□ 1.38
HDAC6-206ENST00000426196 ABCC1P33527 1531 aa23.64■■□□□ 1.38
HDAC6-206ENST00000426196 ITSN2Q9NZM3 1697 aa23.64■■□□□ 1.38
HDAC6-206ENST00000426196 CAMSAP1Q5T5Y3 1602 aa23.64■■□□□ 1.38
HDAC6-206ENST00000426196 PREX2Q70Z35 1606 aa23.64■■□□□ 1.38
HDAC6-206ENST00000426196 MROH2AA6NES4 1674 aa23.63■■□□□ 1.37
HDAC6-206ENST00000426196 KIDINS220Q9ULH0 1771 aa23.62■■□□□ 1.37
HDAC6-206ENST00000426196 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
HDAC6-206ENST00000426196 NPATQ14207 1427 aa23.61■■□□□ 1.37
HDAC6-206ENST00000426196 LRRIQ1Q96JM4 1722 aa23.61■■□□□ 1.37
HDAC6-206ENST00000426196 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
HDAC6-206ENST00000426196 UBAP1LF5GYI3 381 aa23.58■■□□□ 1.37
HDAC6-206ENST00000426196 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
HDAC6-206ENST00000426196 ZNF335Q9H4Z2 1342 aaPredicted RBP23.55■■□□□ 1.36
HDAC6-206ENST00000426196 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
HDAC6-206ENST00000426196 NCKAP5LQ9HCH0 1330 aa23.53■■□□□ 1.36
HDAC6-206ENST00000426196 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
HDAC6-206ENST00000426196 CDC42BPAQ5VT25 1732 aa23.52■■□□□ 1.36
HDAC6-206ENST00000426196 ZMYM3Q14202 1370 aa23.52■■□□□ 1.36
HDAC6-206ENST00000426196 MYO3AQ8NEV4 1616 aa23.51■■□□□ 1.35
HDAC6-206ENST00000426196 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
HDAC6-206ENST00000426196 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
HDAC6-206ENST00000426196 PKD2Q13563 968 aa23.5■■□□□ 1.35
HDAC6-206ENST00000426196 CCDC18Q5T9S5 1454 aa23.49■■□□□ 1.35
HDAC6-206ENST00000426196 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
HDAC6-206ENST00000426196 CEP170BQ9Y4F5 1589 aaPredicted RBP23.47■■□□□ 1.35
HDAC6-206ENST00000426196 TCOF1Q13428 1488 aaKnown RBP23.45■■□□□ 1.34
HDAC6-206ENST00000426196 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
HDAC6-206ENST00000426196 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
HDAC6-206ENST00000426196 ZNF777Q9ULD5 760 aaPredicted RBP23.41■■□□□ 1.34
HDAC6-206ENST00000426196 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
HDAC6-206ENST00000426196 CASKIN1Q8WXD9 1431 aa23.41■■□□□ 1.34
HDAC6-206ENST00000426196 ATP7AQ04656 1500 aa23.4■■□□□ 1.34
HDAC6-206ENST00000426196 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
HDAC6-206ENST00000426196 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
HDAC6-206ENST00000426196 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
HDAC6-206ENST00000426196 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
HDAC6-206ENST00000426196 A2MP01023 1474 aa23.37■■□□□ 1.33
HDAC6-206ENST00000426196 INO80Q9ULG1 1556 aaPredicted RBP23.36■■□□□ 1.33
HDAC6-206ENST00000426196 HSPA1LP34931 641 aa23.34■■□□□ 1.33
HDAC6-206ENST00000426196 HNRNPMP52272 730 aaKnown RBP eCLIP23.34■■□□□ 1.33
HDAC6-206ENST00000426196 GGT6Q6P531 493 aa23.34■■□□□ 1.33
HDAC6-206ENST00000426196 PLEKHH2Q8IVE3 1493 aa23.34■■□□□ 1.33
HDAC6-206ENST00000426196 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.33
HDAC6-206ENST00000426196 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
HDAC6-206ENST00000426196 TOM1O60784 492 aa23.32■■□□□ 1.32
HDAC6-206ENST00000426196 PIP4K2BP78356 416 aa23.32■■□□□ 1.32
HDAC6-206ENST00000426196 CPS1P31327 1500 aa23.32■■□□□ 1.32
HDAC6-206ENST00000426196 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
HDAC6-206ENST00000426196 KIAA1107Q9UPP5 1409 aa23.32■■□□□ 1.32
HDAC6-206ENST00000426196 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
HDAC6-206ENST00000426196 DNMT1P26358 1616 aaKnown RBP23.31■■□□□ 1.32
HDAC6-206ENST00000426196 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
HDAC6-206ENST00000426196 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
HDAC6-206ENST00000426196 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
HDAC6-206ENST00000426196 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
HDAC6-206ENST00000426196 NEURL4Q96JN8 1562 aa23.25■■□□□ 1.31
HDAC6-206ENST00000426196 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms