RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 HFM1A2PYH4 1435 aa25.7■■□□□ 1.7
FN1-208ENST00000426059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.74e-6■■■□□ 15.9
FN1-208ENST00000426059 ABCC5O15440 1437 aa25.69■■□□□ 1.7
FN1-208ENST00000426059 NAIPQ13075 1403 aa25.69■■□□□ 1.7
FN1-208ENST00000426059 DNMT1P26358 1616 aaKnown RBP25.68■■□□□ 1.7
FN1-208ENST00000426059 CDC42BPBQ9Y5S2 1711 aa25.66■■□□□ 1.7
FN1-208ENST00000426059 PREX2Q70Z35 1606 aa25.63■■□□□ 1.69
FN1-208ENST00000426059 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.69
FN1-208ENST00000426059 KDM6BO15054 1643 aa25.58■■□□□ 1.69
FN1-208ENST00000426059 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.69
FN1-208ENST00000426059 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
FN1-208ENST00000426059 SAMD9LQ8IVG5 1584 aa25.57■■□□□ 1.68
FN1-208ENST00000426059 WDR7Q9Y4E6 1490 aa25.57■■□□□ 1.68
FN1-208ENST00000426059 GCC2Q8IWJ2 1684 aa25.57■■□□□ 1.68
FN1-208ENST00000426059 NPM1P06748 294 aaKnown RBP eCLIP25.55■■□□□ 1.68
FN1-208ENST00000426059 ASXL2Q76L83 1435 aa25.55■■□□□ 1.68
FN1-208ENST00000426059 AKNAQ7Z591 1439 aa25.55■■□□□ 1.68
FN1-208ENST00000426059 CYB5RLQ6IPT4 315 aa25.55■■□□□ 1.68
FN1-208ENST00000426059 MAPKBP1O60336 1514 aa25.55■■□□□ 1.68
FN1-208ENST00000426059 CLSPNQ9HAW4 1339 aa25.54■■□□□ 1.68
FN1-208ENST00000426059 CROCC2H7BZ55 1655 aa25.53■■□□□ 1.68
FN1-208ENST00000426059 ROCK1Q13464 1354 aa25.52■■□□□ 1.68
FN1-208ENST00000426059 RIMBP3CA6NJZ7 1639 aa25.51■■□□□ 1.67
FN1-208ENST00000426059 RIMBP3BA6NNM3 1639 aa25.51■■□□□ 1.67
FN1-208ENST00000426059 RIMBP3Q9UFD9 1639 aa25.51■■□□□ 1.67
FN1-208ENST00000426059 MBD5Q9P267 1494 aa25.49■■□□□ 1.67
FN1-208ENST00000426059 PLCH2O75038 1416 aa25.49■■□□□ 1.67
FN1-208ENST00000426059 SYCP2Q9BX26 1530 aa25.48■■□□□ 1.67
FN1-208ENST00000426059 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
FN1-208ENST00000426059 TRIM52Q96A61 297 aa25.47■■□□□ 1.67
FN1-208ENST00000426059 ADGBQ8N7X0 1667 aa25.47■■□□□ 1.67
FN1-208ENST00000426059 TSPY4P0CV99 314 aa25.46■■□□□ 1.67
FN1-208ENST00000426059 TSPY10P0CW01 314 aa25.46■■□□□ 1.67
FN1-208ENST00000426059 C9orf84Q5VXU9 1444 aa25.45■■□□□ 1.66
FN1-208ENST00000426059 SIN3AQ96ST3 1273 aa25.44■■□□□ 1.66
FN1-208ENST00000426059 ARHGEF5Q12774 1597 aa25.43■■□□□ 1.66
FN1-208ENST00000426059 EFCAB2Q5VUJ9 269 aa25.43■■□□□ 1.66
FN1-208ENST00000426059 ANKRD30AQ9BXX3 1397 aa25.42■■□□□ 1.66
FN1-208ENST00000426059 ADGRL2O95490 1459 aa25.42■■□□□ 1.66
FN1-208ENST00000426059 ARHGEF12Q9NZN5 1544 aa25.41■■□□□ 1.66
FN1-208ENST00000426059 CCDC141Q6ZP82 1450 aa25.41■■□□□ 1.66
FN1-208ENST00000426059 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
FN1-208ENST00000426059 ABCA9Q8IUA7 1624 aa25.4■■□□□ 1.66
FN1-208ENST00000426059 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.66
FN1-208ENST00000426059 RSPH4AQ5TD94 716 aa25.35■■□□□ 1.65
FN1-208ENST00000426059 KIAA1107Q9UPP5 1409 aa25.35■■□□□ 1.65
FN1-208ENST00000426059 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
FN1-208ENST00000426059 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
FN1-208ENST00000426059 ABCC1P33527 1531 aa25.33■■□□□ 1.65
FN1-208ENST00000426059 FANCAO15360 1455 aa25.32■■□□□ 1.64
FN1-208ENST00000426059 ANKRD50Q9ULJ7 1429 aa25.32■■□□□ 1.64
FN1-208ENST00000426059 KIF15Q9NS87 1388 aa25.32■■□□□ 1.64
FN1-208ENST00000426059 MPHOSPH9Q99550 1183 aa25.32■■□□□ 1.64
FN1-208ENST00000426059 TRAPPC8Q9Y2L5 1435 aa25.31■■□□□ 1.64
FN1-208ENST00000426059 FOXD1Q16676 465 aa25.31■■□□□ 1.64
FN1-208ENST00000426059 ARAP3Q8WWN8 1544 aa25.3■■□□□ 1.64
FN1-208ENST00000426059 AFAP1Q8N556 730 aa25.29■■□□□ 1.64
FN1-208ENST00000426059 CD109Q6YHK3 1445 aa25.26■■□□□ 1.63
FN1-208ENST00000426059 SLC4A1APQ9BWU0 796 aaKnown RBP25.24■■□□□ 1.63
FN1-208ENST00000426059 MAST1Q9Y2H9 1570 aa25.24■■□□□ 1.63
FN1-208ENST00000426059 ADGRL1O94910 1474 aa25.22■■□□□ 1.63
FN1-208ENST00000426059 SCAPERQ9BY12 1400 aa25.21■■□□□ 1.63
FN1-208ENST00000426059 PZPP20742 1482 aa25.2■■□□□ 1.62
FN1-208ENST00000426059 SPAG9O60271 1321 aaKnown RBP25.18■■□□□ 1.62
FN1-208ENST00000426059 NUP155O75694 1391 aa25.16■■□□□ 1.62
FN1-208ENST00000426059 PLXNC1O60486 1568 aa25.16■■□□□ 1.62
FN1-208ENST00000426059 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
FN1-208ENST00000426059 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
FN1-208ENST00000426059 PKD2Q13563 968 aa25.11■■□□□ 1.61
FN1-208ENST00000426059 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
FN1-208ENST00000426059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.11■■□□□ 1.61
FN1-208ENST00000426059 ZFYVE16Q7Z3T8 1539 aa25.11■■□□□ 1.61
FN1-208ENST00000426059 FAM69CQ0P6D2 419 aa25.1■■□□□ 1.61
FN1-208ENST00000426059 ZNF316A6NFI3 1004 aaPredicted RBP25.1■■□□□ 1.61
FN1-208ENST00000426059 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
FN1-208ENST00000426059 ANKRD30BQ9BXX2 1392 aa25.09■■□□□ 1.61
FN1-208ENST00000426059 MAP3K4Q9Y6R4 1608 aa25.07■■□□□ 1.6
FN1-208ENST00000426059 RTEL1-TNFRSF6BF6WH68 1400 aa25.06■■□□□ 1.6
FN1-208ENST00000426059 ATP7AQ04656 1500 aa25.06■■□□□ 1.6
FN1-208ENST00000426059 TIMELESSQ9UNS1 1208 aa25.06■■□□□ 1.6
FN1-208ENST00000426059 CFAP74Q9C0B2 1584 aa25.05■■□□□ 1.6
FN1-208ENST00000426059 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
FN1-208ENST00000426059 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
FN1-208ENST00000426059 DIP2BQ9P265 1576 aa25.04■■□□□ 1.6
FN1-208ENST00000426059 KDM5DQ9BY66 1539 aa25.03■■□□□ 1.6
FN1-208ENST00000426059 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
FN1-208ENST00000426059 ZNF518AQ6AHZ1 1483 aa25.02■■□□□ 1.6
FN1-208ENST00000426059 ERBINQ96RT1 1412 aa25.02■■□□□ 1.6
FN1-208ENST00000426059 GLI2P10070 1586 aa25.01■■□□□ 1.6
FN1-208ENST00000426059 TSPOAP1O95153 1857 aa25.01■■□□□ 1.59
FN1-208ENST00000426059 FAM135AQ9P2D6 1515 aa25.01■■□□□ 1.59
FN1-208ENST00000426059 UNC13BO14795 1591 aa25■■□□□ 1.59
FN1-208ENST00000426059 POGZQ7Z3K3 1410 aa25■■□□□ 1.59
FN1-208ENST00000426059 KIDINS220Q9ULH0 1771 aa24.99■■□□□ 1.59
FN1-208ENST00000426059 NEO1Q92859 1461 aa24.98■■□□□ 1.59
FN1-208ENST00000426059 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
FN1-208ENST00000426059 L3MBTL2Q969R5 705 aa24.94■■□□□ 1.58
FN1-208ENST00000426059 KDM5CP41229 1560 aa24.93■■□□□ 1.58
FN1-208ENST00000426059 KIF3BO15066 747 aa24.92■■□□□ 1.58
FN1-208ENST00000426059 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms