RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
HDAC7-208ENST00000425451 ATP1B4Q9UN42 357 aaPredicted RBP29.15■■■□□ 2.26
HDAC7-208ENST00000425451 POGZQ7Z3K3 1410 aa29.14■■■□□ 2.26
HDAC7-208ENST00000425451 EFCAB2Q5VUJ9 269 aa29.09■■■□□ 2.25
HDAC7-208ENST00000425451 FBXO41Q8TF61 875 aa29.08■■■□□ 2.25
HDAC7-208ENST00000425451 CDK11AQ9UQ88 783 aaPredicted RBP29.08■■■□□ 2.25
HDAC7-208ENST00000425451 KIF14Q15058 1648 aa29.07■■■□□ 2.24
HDAC7-208ENST00000425451 MYO5CQ9NQX4 1742 aa29.06■■■□□ 2.24
HDAC7-208ENST00000425451 MLECQ14165 292 aa29.05■■■□□ 2.24
HDAC7-208ENST00000425451 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
HDAC7-208ENST00000425451 PLPPR3Q6T4P5 718 aa29.03■■■□□ 2.24
HDAC7-208ENST00000425451 ATP10AO60312 1499 aa29.03■■■□□ 2.24
HDAC7-208ENST00000425451 HSPA2P54652 639 aa29.02■■■□□ 2.24
HDAC7-208ENST00000425451 LRRIQ1Q96JM4 1722 aa29.01■■■□□ 2.23
HDAC7-208ENST00000425451 FER1L4A9Z1Z3 1794 aa28.98■■■□□ 2.23
HDAC7-208ENST00000425451 C9orf84Q5VXU9 1444 aa28.97■■■□□ 2.23
HDAC7-208ENST00000425451 ARHGEF12Q9NZN5 1544 aa28.97■■■□□ 2.23
HDAC7-208ENST00000425451 AFAP1Q8N556 730 aa28.96■■■□□ 2.23
HDAC7-208ENST00000425451 ARHGAP5Q13017 1502 aa28.95■■■□□ 2.23
HDAC7-208ENST00000425451 ZNF518AQ6AHZ1 1483 aa28.95■■■□□ 2.22
HDAC7-208ENST00000425451 CLIP1P30622 1438 aa28.94■■■□□ 2.22
HDAC7-208ENST00000425451 KDM5CP41229 1560 aa28.93■■■□□ 2.22
HDAC7-208ENST00000425451 CDC42BPBQ9Y5S2 1711 aa28.89■■■□□ 2.21
HDAC7-208ENST00000425451 CASKIN1Q8WXD9 1431 aa28.87■■■□□ 2.21
HDAC7-208ENST00000425451 CEBPAP49715 358 aaPredicted RBP28.86■■■□□ 2.21
HDAC7-208ENST00000425451 DIP2CQ9Y2E4 1556 aa28.84■■■□□ 2.21
HDAC7-208ENST00000425451 CCDC18Q5T9S5 1454 aa28.83■■■□□ 2.21
HDAC7-208ENST00000425451 MLH3Q9UHC1 1453 aa28.82■■■□□ 2.2
HDAC7-208ENST00000425451 PREX2Q70Z35 1606 aa28.82■■■□□ 2.2
HDAC7-208ENST00000425451 TRAPPC8Q9Y2L5 1435 aa28.81■■■□□ 2.2
HDAC7-208ENST00000425451 REREQ9P2R6 1566 aa28.8■■■□□ 2.2
HDAC7-208ENST00000425451 MYT1LQ9UL68 1186 aa28.79■■■□□ 2.2
HDAC7-208ENST00000425451 ABCA6Q8N139 1617 aa28.79■■■□□ 2.2
HDAC7-208ENST00000425451 ABCC1P33527 1531 aa28.79■■■□□ 2.2
HDAC7-208ENST00000425451 PREX1Q8TCU6 1659 aa28.78■■■□□ 2.2
HDAC7-208ENST00000425451 ITSN2Q9NZM3 1697 aa28.74■■■□□ 2.19
HDAC7-208ENST00000425451 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
HDAC7-208ENST00000425451 CDC42BPAQ5VT25 1732 aa28.72■■■□□ 2.19
HDAC7-208ENST00000425451 CERKQ8TCT0 537 aa28.72■■■□□ 2.19
HDAC7-208ENST00000425451 AGLP35573 1532 aa28.72■■■□□ 2.19
HDAC7-208ENST00000425451 KIDINS220Q9ULH0 1771 aa28.69■■■□□ 2.18
HDAC7-208ENST00000425451 UHRF1BP1Q6BDS2 1440 aa28.67■■■□□ 2.18
HDAC7-208ENST00000425451 SETD1BQ9UPS6 1966 aaKnown RBP28.66■■■□□ 2.18
HDAC7-208ENST00000425451 STRCQ7RTU9 1775 aa28.66■■■□□ 2.18
HDAC7-208ENST00000425451 C3P01024 1663 aa28.65■■■□□ 2.18
HDAC7-208ENST00000425451 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.18
HDAC7-208ENST00000425451 SAMD9LQ8IVG5 1584 aa28.62■■■□□ 2.17
HDAC7-208ENST00000425451 ZNF777Q9ULD5 760 aaPredicted RBP28.62■■■□□ 2.17
HDAC7-208ENST00000425451 DMRT2Q9Y5R5 561 aa28.6■■■□□ 2.17
HDAC7-208ENST00000425451 ESF1Q9H501 851 aaKnown RBP28.58■■■□□ 2.17
HDAC7-208ENST00000425451 SYCP2Q9BX26 1530 aa28.58■■■□□ 2.17
HDAC7-208ENST00000425451 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
HDAC7-208ENST00000425451 CNTLNQ9NXG0 1405 aa28.54■■■□□ 2.16
HDAC7-208ENST00000425451 SPAG9O60271 1321 aaKnown RBP28.54■■■□□ 2.16
HDAC7-208ENST00000425451 KIAA1107Q9UPP5 1409 aa28.53■■■□□ 2.16
HDAC7-208ENST00000425451 CFDP1Q9UEE9 299 aaPredicted RBP28.51■■■□□ 2.15
HDAC7-208ENST00000425451 PTPRTO14522 1441 aa28.5■■■□□ 2.15
HDAC7-208ENST00000425451 CCNB3Q8WWL7 1395 aa28.49■■■□□ 2.15
HDAC7-208ENST00000425451 ATP7AQ04656 1500 aa28.48■■■□□ 2.15
HDAC7-208ENST00000425451 PLEKHH2Q8IVE3 1493 aa28.47■■■□□ 2.15
HDAC7-208ENST00000425451 INO80Q9ULG1 1556 aaPredicted RBP28.46■■■□□ 2.15
HDAC7-208ENST00000425451 ZMYM3Q14202 1370 aa28.46■■■□□ 2.15
HDAC7-208ENST00000425451 SUPT6HQ7KZ85 1726 aaKnown RBP28.46■■■□□ 2.15
HDAC7-208ENST00000425451 MROH2AA6NES4 1674 aa28.45■■■□□ 2.15
HDAC7-208ENST00000425451 MTUS2Q5JR59 1369 aa28.45■■■□□ 2.14
HDAC7-208ENST00000425451 PLXNC1O60486 1568 aa28.45■■■□□ 2.14
HDAC7-208ENST00000425451 NPATQ14207 1427 aa28.44■■■□□ 2.14
HDAC7-208ENST00000425451 NCOA1Q15788 1441 aa28.43■■■□□ 2.14
HDAC7-208ENST00000425451 A2MP01023 1474 aa28.42■■■□□ 2.14
HDAC7-208ENST00000425451 ZNF644Q9H582 1327 aaPredicted RBP28.41■■■□□ 2.14
HDAC7-208ENST00000425451 TIAM1Q13009 1591 aa28.38■■■□□ 2.13
HDAC7-208ENST00000425451 LTBP4Q8N2S1 1624 aa28.37■■■□□ 2.13
HDAC7-208ENST00000425451 CLTCQ00610 1675 aaKnown RBP28.36■■■□□ 2.13
HDAC7-208ENST00000425451 MBD5Q9P267 1494 aa28.36■■■□□ 2.13
HDAC7-208ENST00000425451 CAMSAP1Q5T5Y3 1602 aa28.36■■■□□ 2.13
HDAC7-208ENST00000425451 GGT6Q6P531 493 aa28.34■■■□□ 2.13
HDAC7-208ENST00000425451 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
HDAC7-208ENST00000425451 PTPRKQ15262 1439 aa28.33■■■□□ 2.13
HDAC7-208ENST00000425451 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
HDAC7-208ENST00000425451 ADGBQ8N7X0 1667 aa28.31■■■□□ 2.12
HDAC7-208ENST00000425451 PPP6R1Q9UPN7 881 aa28.29■■■□□ 2.12
HDAC7-208ENST00000425451 RTEL1-TNFRSF6BF6WH68 1400 aa28.28■■■□□ 2.12
HDAC7-208ENST00000425451 NCKAP5LQ9HCH0 1330 aa28.28■■■□□ 2.12
HDAC7-208ENST00000425451 MYO3AQ8NEV4 1616 aa28.27■■■□□ 2.12
HDAC7-208ENST00000425451 ZNF142P52746 1687 aaPredicted RBP28.26■■■□□ 2.12
HDAC7-208ENST00000425451 IQSEC2Q5JU85 1478 aa28.24■■■□□ 2.11
HDAC7-208ENST00000425451 CEP170BQ9Y4F5 1589 aaPredicted RBP28.24■■■□□ 2.11
HDAC7-208ENST00000425451 DHX29Q7Z478 1369 aaKnown RBP28.24■■■□□ 2.11
HDAC7-208ENST00000425451 PLA2R1Q13018 1463 aa28.22■■■□□ 2.11
HDAC7-208ENST00000425451 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
HDAC7-208ENST00000425451 NCOA2Q15596 1464 aa28.2■■■□□ 2.1
HDAC7-208ENST00000425451 ZNF335Q9H4Z2 1342 aaPredicted RBP28.19■■■□□ 2.1
HDAC7-208ENST00000425451 PKD2Q13563 968 aa28.19■■■□□ 2.1
HDAC7-208ENST00000425451 CAMSAP2Q08AD1 1489 aa28.16■■■□□ 2.1
HDAC7-208ENST00000425451 CCDC141Q6ZP82 1450 aa28.16■■■□□ 2.1
HDAC7-208ENST00000425451 DISP3Q9P2K9 1392 aa28.15■■■□□ 2.1
HDAC7-208ENST00000425451 KIF3BO15066 747 aa28.14■■■□□ 2.1
HDAC7-208ENST00000425451 A2ML1A8K2U0 1454 aa28.14■■■□□ 2.09
HDAC7-208ENST00000425451 RSPH4AQ5TD94 716 aa28.13■■■□□ 2.09
HDAC7-208ENST00000425451 FBXO31Q5XUX0 539 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms