RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
TOP3B-203ENST00000424393 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
TOP3B-203ENST00000424393 FRMPD1Q5SYB0 1578 aa17.35■□□□□ 0.37
TOP3B-203ENST00000424393 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
TOP3B-203ENST00000424393 RICTORQ6R327 1708 aa17.33■□□□□ 0.36
TOP3B-203ENST00000424393 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
TOP3B-203ENST00000424393 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
TOP3B-203ENST00000424393 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
TOP3B-203ENST00000424393 GPATCH8Q9UKJ3 1502 aaKnown RBP17.3■□□□□ 0.36
TOP3B-203ENST00000424393 DENND4BO75064 1496 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-203ENST00000424393 LRRC9Q6ZRR7 1453 aa17.29■□□□□ 0.36
TOP3B-203ENST00000424393 SUPT6HQ7KZ85 1726 aaKnown RBP17.28■□□□□ 0.36
TOP3B-203ENST00000424393 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
TOP3B-203ENST00000424393 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
TOP3B-203ENST00000424393 ABCC1P33527 1531 aa17.26■□□□□ 0.35
TOP3B-203ENST00000424393 NCOA2Q15596 1464 aa17.25■□□□□ 0.35
TOP3B-203ENST00000424393 SAMD9LQ8IVG5 1584 aa17.25■□□□□ 0.35
TOP3B-203ENST00000424393 POGZQ7Z3K3 1410 aa17.25■□□□□ 0.35
TOP3B-203ENST00000424393 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-203ENST00000424393 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
TOP3B-203ENST00000424393 ZMYM4Q5VZL5 1548 aa17.24■□□□□ 0.35
TOP3B-203ENST00000424393 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
TOP3B-203ENST00000424393 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
TOP3B-203ENST00000424393 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
TOP3B-203ENST00000424393 KDM5CP41229 1560 aa17.19■□□□□ 0.34
TOP3B-203ENST00000424393 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
TOP3B-203ENST00000424393 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
TOP3B-203ENST00000424393 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
TOP3B-203ENST00000424393 APLP2Q06481 763 aa17.18■□□□□ 0.34
TOP3B-203ENST00000424393 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
TOP3B-203ENST00000424393 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
TOP3B-203ENST00000424393 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
TOP3B-203ENST00000424393 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
TOP3B-203ENST00000424393 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
TOP3B-203ENST00000424393 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
TOP3B-203ENST00000424393 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
TOP3B-203ENST00000424393 FBXO41Q8TF61 875 aa17.14■□□□□ 0.33
TOP3B-203ENST00000424393 ZNF644Q9H582 1327 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-203ENST00000424393 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
TOP3B-203ENST00000424393 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
TOP3B-203ENST00000424393 HNRNPMP52272 730 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■■■■■ 28.8
TOP3B-203ENST00000424393 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
TOP3B-203ENST00000424393 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
TOP3B-203ENST00000424393 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
TOP3B-203ENST00000424393 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
TOP3B-203ENST00000424393 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
TOP3B-203ENST00000424393 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
TOP3B-203ENST00000424393 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-203ENST00000424393 ATP10AO60312 1499 aa17.08■□□□□ 0.32
TOP3B-203ENST00000424393 INO80Q9ULG1 1556 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-203ENST00000424393 MIA2Q96PC5 1412 aa17.07■□□□□ 0.32
TOP3B-203ENST00000424393 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
TOP3B-203ENST00000424393 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
TOP3B-203ENST00000424393 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
TOP3B-203ENST00000424393 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
TOP3B-203ENST00000424393 ARHGEF5Q12774 1597 aa17.05■□□□□ 0.32
TOP3B-203ENST00000424393 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
TOP3B-203ENST00000424393 SPAG9O60271 1321 aaKnown RBP17.04■□□□□ 0.32
TOP3B-203ENST00000424393 REREQ9P2R6 1566 aa17.04■□□□□ 0.32
TOP3B-203ENST00000424393 CCDC141Q6ZP82 1450 aa17.04■□□□□ 0.32
TOP3B-203ENST00000424393 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
TOP3B-203ENST00000424393 PTPRMP28827 1452 aa17.02■□□□□ 0.32
TOP3B-203ENST00000424393 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
TOP3B-203ENST00000424393 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
TOP3B-203ENST00000424393 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
TOP3B-203ENST00000424393 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
TOP3B-203ENST00000424393 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
TOP3B-203ENST00000424393 AGLP35573 1532 aa16.98■□□□□ 0.31
TOP3B-203ENST00000424393 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
TOP3B-203ENST00000424393 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
TOP3B-203ENST00000424393 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
TOP3B-203ENST00000424393 MAST1Q9Y2H9 1570 aa16.97■□□□□ 0.31
TOP3B-203ENST00000424393 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
TOP3B-203ENST00000424393 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
TOP3B-203ENST00000424393 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
TOP3B-203ENST00000424393 A2MP01023 1474 aa16.95■□□□□ 0.3
TOP3B-203ENST00000424393 MLECQ14165 292 aa16.94■□□□□ 0.3
TOP3B-203ENST00000424393 DNMT1P26358 1616 aaKnown RBP16.94■□□□□ 0.3
TOP3B-203ENST00000424393 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
TOP3B-203ENST00000424393 ABCC5O15440 1437 aa16.92■□□□□ 0.3
TOP3B-203ENST00000424393 DAPK1P53355 1430 aa16.91■□□□□ 0.3
TOP3B-203ENST00000424393 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
TOP3B-203ENST00000424393 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
TOP3B-203ENST00000424393 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
TOP3B-203ENST00000424393 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
TOP3B-203ENST00000424393 HSPA2P54652 639 aa16.87■□□□□ 0.29
TOP3B-203ENST00000424393 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
TOP3B-203ENST00000424393 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
TOP3B-203ENST00000424393 EIF2AK4Q9P2K8 1649 aaKnown RBP16.81■□□□□ 0.28
TOP3B-203ENST00000424393 DUOX2Q9NRD8 1548 aa16.81■□□□□ 0.28
TOP3B-203ENST00000424393 C3P01024 1663 aa16.81■□□□□ 0.28
TOP3B-203ENST00000424393 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
TOP3B-203ENST00000424393 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
TOP3B-203ENST00000424393 CERKQ8TCT0 537 aa16.8■□□□□ 0.28
TOP3B-203ENST00000424393 CHIC2Q9UKJ5 165 aa16.8■□□□□ 0.28
TOP3B-203ENST00000424393 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
TOP3B-203ENST00000424393 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
TOP3B-203ENST00000424393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
TOP3B-203ENST00000424393 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
TOP3B-203ENST00000424393 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms